RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 TEX14Q8IWB6 1497 aa29.13■■■□□ 2.25
CDH5-202ENST00000539168 DEPDC5O75140 1603 aa29.1■■■□□ 2.25
CDH5-202ENST00000539168 KANK1Q14678 1352 aa29.07■■■□□ 2.24
CDH5-202ENST00000539168 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.06■■■□□ 2.24
CDH5-202ENST00000539168 A2MP01023 1474 aa29.05■■■□□ 2.24
CDH5-202ENST00000539168 RICTORQ6R327 1708 aa29.03■■■□□ 2.24
CDH5-202ENST00000539168 DIEXFQ68CQ4 756 aaKnown RBP29.02■■■□□ 2.24
CDH5-202ENST00000539168 L3MBTL2Q969R5 705 aa29.02■■■□□ 2.24
CDH5-202ENST00000539168 ATP10AO60312 1499 aa29■■■□□ 2.23
CDH5-202ENST00000539168 PRDM15P57071 1507 aaPredicted RBP28.99■■■□□ 2.23
CDH5-202ENST00000539168 VWDEQ8N2E2 1590 aa28.99■■■□□ 2.23
CDH5-202ENST00000539168 BCORL1Q5H9F3 1711 aa28.98■■■□□ 2.23
CDH5-202ENST00000539168 KIF3BO15066 747 aa28.98■■■□□ 2.23
CDH5-202ENST00000539168 PPRC1Q5VV67 1664 aaKnown RBP28.97■■■□□ 2.23
CDH5-202ENST00000539168 RNF17Q9BXT8 1623 aaKnown RBP28.95■■■□□ 2.23
CDH5-202ENST00000539168 TET3O43151 1660 aa28.95■■■□□ 2.23
CDH5-202ENST00000539168 CCDC144AA2RUR9 1427 aa28.95■■■□□ 2.23
CDH5-202ENST00000539168 ZMYM4Q5VZL5 1548 aa28.95■■■□□ 2.22
CDH5-202ENST00000539168 ABCA6Q8N139 1617 aa28.94■■■□□ 2.22
CDH5-202ENST00000539168 RAPGEF3O95398 923 aa28.94■■■□□ 2.22
CDH5-202ENST00000539168 KIF13AQ9H1H9 1805 aa28.94■■■□□ 2.22
CDH5-202ENST00000539168 TSPOAP1O95153 1857 aa28.91■■■□□ 2.22
CDH5-202ENST00000539168 MROH1Q8NDA8 1641 aa28.9■■■□□ 2.22
CDH5-202ENST00000539168 FRMPD1Q5SYB0 1578 aa28.9■■■□□ 2.22
CDH5-202ENST00000539168 DIP2CQ9Y2E4 1556 aa28.9■■■□□ 2.22
CDH5-202ENST00000539168 LMTK2Q8IWU2 1503 aa28.89■■■□□ 2.21
CDH5-202ENST00000539168 E9PCH4 1651 aa28.87■■■□□ 2.21
CDH5-202ENST00000539168 PLA2R1Q13018 1463 aa28.87■■■□□ 2.21
CDH5-202ENST00000539168 PTPRTO14522 1441 aa28.83■■■□□ 2.21
CDH5-202ENST00000539168 TRPM2O94759 1503 aa28.82■■■□□ 2.2
CDH5-202ENST00000539168 UHRF1BP1Q6BDS2 1440 aa28.82■■■□□ 2.2
CDH5-202ENST00000539168 EFCAB6Q5THR3 1501 aa28.8■■■□□ 2.2
CDH5-202ENST00000539168 SPHKAPQ2M3C7 1700 aa28.8■■■□□ 2.2
CDH5-202ENST00000539168 REREQ9P2R6 1566 aa28.78■■■□□ 2.2
CDH5-202ENST00000539168 YEATS2Q9ULM3 1422 aa28.75■■■□□ 2.19
CDH5-202ENST00000539168 EIF4G2P78344 907 aaKnown RBP eCLIP28.74■■■□□ 2.19
CDH5-202ENST00000539168 NBPF8Q3BBV2 869 aa28.74■■■□□ 2.19
CDH5-202ENST00000539168 ZC3H13Q5T200 1668 aaKnown RBP28.72■■■□□ 2.19
CDH5-202ENST00000539168 NEURL4Q96JN8 1562 aa28.72■■■□□ 2.19
CDH5-202ENST00000539168 STAC3Q96MF2 364 aa28.71■■■□□ 2.19
CDH5-202ENST00000539168 CEP152O94986 1710 aa28.71■■■□□ 2.19
CDH5-202ENST00000539168 GGT6Q6P531 493 aa28.7■■■□□ 2.19
CDH5-202ENST00000539168 ABCC3O15438 1527 aa28.69■■■□□ 2.18
CDH5-202ENST00000539168 AGLP35573 1532 aa28.69■■■□□ 2.18
CDH5-202ENST00000539168 DCAF11Q8TEB1 546 aa28.68■■■□□ 2.18
CDH5-202ENST00000539168 WASHC2CQ9Y4E1 1318 aa28.68■■■□□ 2.18
CDH5-202ENST00000539168 RALGAPBQ86X10 1494 aa28.67■■■□□ 2.18
CDH5-202ENST00000539168 PPP6R1Q9UPN7 881 aa28.66■■■□□ 2.18
CDH5-202ENST00000539168 SPATA31E1Q6ZUB1 1445 aa28.65■■■□□ 2.18
CDH5-202ENST00000539168 ARHGAP31Q2M1Z3 1444 aa28.63■■■□□ 2.17
CDH5-202ENST00000539168 CLTCL1P53675 1640 aa28.63■■■□□ 2.17
CDH5-202ENST00000539168 HSPA5P11021 654 aaKnown RBP28.62■■■□□ 2.17
CDH5-202ENST00000539168 CAMSAP1Q5T5Y3 1602 aa28.62■■■□□ 2.17
CDH5-202ENST00000539168 ARHGEF40Q8TER5 1519 aa28.62■■■□□ 2.17
CDH5-202ENST00000539168 CNTLNQ9NXG0 1405 aa28.62■■■□□ 2.17
CDH5-202ENST00000539168 NPATQ14207 1427 aa28.6■■■□□ 2.17
CDH5-202ENST00000539168 PRAG1Q86YV5 1406 aa28.6■■■□□ 2.17
CDH5-202ENST00000539168 COL17A1Q9UMD9 1497 aaPredicted RBP28.6■■■□□ 2.17
CDH5-202ENST00000539168 RGL3Q3MIN7 710 aa28.59■■■□□ 2.17
CDH5-202ENST00000539168 ZNF326Q5BKZ1 582 aaKnown RBP28.59■■■□□ 2.17
CDH5-202ENST00000539168 KDM2AQ9Y2K7 1162 aa28.59■■■□□ 2.17
CDH5-202ENST00000539168 KIF1BO60333 1816 aa28.56■■■□□ 2.16
CDH5-202ENST00000539168 HIRIP3Q9BW71 556 aaPredicted RBP28.53■■■□□ 2.16
CDH5-202ENST00000539168 TRPM1Q7Z4N2 1603 aa28.52■■■□□ 2.16
CDH5-202ENST00000539168 DNAJC5Q9H3Z4 198 aa28.52■■■□□ 2.16
CDH5-202ENST00000539168 NOS1P29475 1434 aa28.52■■■□□ 2.16
CDH5-202ENST00000539168 USP47Q96K76 1375 aa28.5■■■□□ 2.15
CDH5-202ENST00000539168 CARD11Q9BXL7 1154 aa28.5■■■□□ 2.15
CDH5-202ENST00000539168 LAMC1P11047 1609 aa28.49■■■□□ 2.15
CDH5-202ENST00000539168 ROCK2O75116 1388 aaKnown RBP28.49■■■□□ 2.15
CDH5-202ENST00000539168 GPRASP1Q5JY77 1395 aa28.48■■■□□ 2.15
CDH5-202ENST00000539168 MIER1Q8N108 512 aa28.46■■■□□ 2.15
CDH5-202ENST00000539168 DDX10Q13206 875 aaKnown RBP28.45■■■□□ 2.15
CDH5-202ENST00000539168 ADGRB3O60242 1522 aa28.44■■■□□ 2.14
CDH5-202ENST00000539168 MYOM2P54296 1465 aa28.44■■■□□ 2.14
CDH5-202ENST00000539168 POLR1AO95602 1720 aaPredicted RBP28.43■■■□□ 2.14
CDH5-202ENST00000539168 ARID4BQ4LE39 1312 aaPredicted RBP28.43■■■□□ 2.14
CDH5-202ENST00000539168 UGGT1Q9NYU2 1555 aa28.43■■■□□ 2.14
CDH5-202ENST00000539168 TRHP20396 242 aaPredicted RBP28.42■■■□□ 2.14
CDH5-202ENST00000539168 MADDQ8WXG6 1647 aa28.42■■■□□ 2.14
CDH5-202ENST00000539168 PIK3C2BO00750 1634 aa28.42■■■□□ 2.14
CDH5-202ENST00000539168 SLC52A1Q9NWF4 448 aa28.42■■■□□ 2.14
CDH5-202ENST00000539168 RPGRIP1LQ68CZ1 1315 aa28.41■■■□□ 2.14
CDH5-202ENST00000539168 SIGLEC1Q9BZZ2 1709 aa28.4■■■□□ 2.14
CDH5-202ENST00000539168 WASHC2AQ641Q2 1341 aa28.38■■■□□ 2.13
CDH5-202ENST00000539168 KIAA1210Q9ULL0 1709 aa28.38■■■□□ 2.13
CDH5-202ENST00000539168 CFAP65Q6ZU64 1925 aaKnown RBP28.37■■■□□ 2.13
CDH5-202ENST00000539168 CCDC7Q96M83 1385 aa28.37■■■□□ 2.13
CDH5-202ENST00000539168 PREX1Q8TCU6 1659 aa28.37■■■□□ 2.13
CDH5-202ENST00000539168 IFT172Q9UG01 1749 aa28.37■■■□□ 2.13
CDH5-202ENST00000539168 SYNMO15061 1565 aa28.37■■■□□ 2.13
CDH5-202ENST00000539168 MROH2AA6NES4 1674 aa28.35■■■□□ 2.13
CDH5-202ENST00000539168 CLTCQ00610 1675 aaKnown RBP28.33■■■□□ 2.13
CDH5-202ENST00000539168 ESF1Q9H501 851 aaKnown RBP28.32■■■□□ 2.12
CDH5-202ENST00000539168 ERVK-7P63135 1459 aa28.31■■■□□ 2.12
CDH5-202ENST00000539168 NRXN1Q9ULB1 1477 aa28.31■■■□□ 2.12
CDH5-202ENST00000539168 CHGAP10645 457 aaKnown RBP28.29■■■□□ 2.12
CDH5-202ENST00000539168 NBPF1Q3BBV0 1214 aa28.29■■■□□ 2.12
CDH5-202ENST00000539168 PPLO60437 1756 aa28.28■■■□□ 2.12
CDH5-202ENST00000539168 KIF7Q2M1P5 1343 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms