RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 ZMYM4Q5VZL5 1548 aa28.47■■■□□ 2.15
EFCAB11-202ENST00000538485 MAGI2Q86UL8 1455 aa28.46■■■□□ 2.15
EFCAB11-202ENST00000538485 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.46■■■□□ 2.15
EFCAB11-202ENST00000538485 YEATS2Q9ULM3 1422 aa28.44■■■□□ 2.14
EFCAB11-202ENST00000538485 FAM135AQ9P2D6 1515 aa28.44■■■□□ 2.14
EFCAB11-202ENST00000538485 DIP2CQ9Y2E4 1556 aa28.44■■■□□ 2.14
EFCAB11-202ENST00000538485 EIF2AK4Q9P2K8 1649 aaKnown RBP28.44■■■□□ 2.14
EFCAB11-202ENST00000538485 KIF3BO15066 747 aa28.42■■■□□ 2.14
EFCAB11-202ENST00000538485 NEUROD1Q13562 356 aa28.42■■■□□ 2.14
EFCAB11-202ENST00000538485 PKD2Q13563 968 aa28.42■■■□□ 2.14
EFCAB11-202ENST00000538485 DEPDC5O75140 1603 aa28.41■■■□□ 2.14
EFCAB11-202ENST00000538485 IQGAP3Q86VI3 1631 aa28.41■■■□□ 2.14
EFCAB11-202ENST00000538485 ANKRD30BQ9BXX2 1392 aa28.39■■■□□ 2.13
EFCAB11-202ENST00000538485 MROH1Q8NDA8 1641 aa28.34■■■□□ 2.13
EFCAB11-202ENST00000538485 PRDM15P57071 1507 aaPredicted RBP28.32■■■□□ 2.12
EFCAB11-202ENST00000538485 BCORL1Q5H9F3 1711 aa28.31■■■□□ 2.12
EFCAB11-202ENST00000538485 RNF17Q9BXT8 1623 aaKnown RBP28.3■■■□□ 2.12
EFCAB11-202ENST00000538485 VWDEQ8N2E2 1590 aa28.3■■■□□ 2.12
EFCAB11-202ENST00000538485 ATP10AO60312 1499 aa28.29■■■□□ 2.12
EFCAB11-202ENST00000538485 TIMELESSQ9UNS1 1208 aa28.27■■■□□ 2.12
EFCAB11-202ENST00000538485 KANK1Q14678 1352 aa28.27■■■□□ 2.12
EFCAB11-202ENST00000538485 GGT6Q6P531 493 aa28.25■■■□□ 2.11
EFCAB11-202ENST00000538485 ARHGEF40Q8TER5 1519 aa28.23■■■□□ 2.11
EFCAB11-202ENST00000538485 RPRD2Q5VT52 1461 aaKnown RBP28.23■■■□□ 2.11
EFCAB11-202ENST00000538485 REREQ9P2R6 1566 aa28.23■■■□□ 2.11
EFCAB11-202ENST00000538485 TONSLQ96HA7 1378 aa28.22■■■□□ 2.11
EFCAB11-202ENST00000538485 TET3O43151 1660 aa28.21■■■□□ 2.11
EFCAB11-202ENST00000538485 E9PCH4 1651 aa28.2■■■□□ 2.1
EFCAB11-202ENST00000538485 PLA2R1Q13018 1463 aa28.18■■■□□ 2.1
EFCAB11-202ENST00000538485 CEP152O94986 1710 aa28.17■■■□□ 2.1
EFCAB11-202ENST00000538485 SIGLEC1Q9BZZ2 1709 aa28.17■■■□□ 2.1
EFCAB11-202ENST00000538485 LMTK2Q8IWU2 1503 aa28.16■■■□□ 2.1
EFCAB11-202ENST00000538485 AGLP35573 1532 aa28.15■■■□□ 2.1
EFCAB11-202ENST00000538485 WASHC2CQ9Y4E1 1318 aa28.13■■■□□ 2.09
EFCAB11-202ENST00000538485 EFCAB6Q5THR3 1501 aa28.12■■■□□ 2.09
EFCAB11-202ENST00000538485 PPP1R15AO75807 674 aaPredicted RBP28.12■■■□□ 2.09
EFCAB11-202ENST00000538485 ABCC3O15438 1527 aa28.11■■■□□ 2.09
EFCAB11-202ENST00000538485 CCDC144AA2RUR9 1427 aa28.09■■■□□ 2.09
EFCAB11-202ENST00000538485 L3MBTL2Q969R5 705 aa28.09■■■□□ 2.09
EFCAB11-202ENST00000538485 PTPRTO14522 1441 aa28.07■■■□□ 2.08
EFCAB11-202ENST00000538485 SPHKAPQ2M3C7 1700 aa28.06■■■□□ 2.08
EFCAB11-202ENST00000538485 ZC3H13Q5T200 1668 aaKnown RBP28.04■■■□□ 2.08
EFCAB11-202ENST00000538485 NPATQ14207 1427 aa28.04■■■□□ 2.08
EFCAB11-202ENST00000538485 TRPM2O94759 1503 aa28.03■■■□□ 2.08
EFCAB11-202ENST00000538485 CAMSAP1Q5T5Y3 1602 aa28.03■■■□□ 2.08
EFCAB11-202ENST00000538485 MLECQ14165 292 aa28■■■□□ 2.07
EFCAB11-202ENST00000538485 PPP6R1Q9UPN7 881 aa27.99■■■□□ 2.07
EFCAB11-202ENST00000538485 CFAP65Q6ZU64 1925 aaKnown RBP27.98■■■□□ 2.07
EFCAB11-202ENST00000538485 ARHGAP31Q2M1Z3 1444 aa27.96■■■□□ 2.07
EFCAB11-202ENST00000538485 ARID4BQ4LE39 1312 aaPredicted RBP27.96■■■□□ 2.07
EFCAB11-202ENST00000538485 CLTCL1P53675 1640 aa27.95■■■□□ 2.07
EFCAB11-202ENST00000538485 UGGT1Q9NYU2 1555 aa27.92■■■□□ 2.06
EFCAB11-202ENST00000538485 CLTCQ00610 1675 aaKnown RBP27.91■■■□□ 2.06
EFCAB11-202ENST00000538485 RGL3Q3MIN7 710 aa27.91■■■□□ 2.06
EFCAB11-202ENST00000538485 NOS1P29475 1434 aa27.89■■■□□ 2.06
EFCAB11-202ENST00000538485 SPATA31E1Q6ZUB1 1445 aa27.89■■■□□ 2.06
EFCAB11-202ENST00000538485 CNTLNQ9NXG0 1405 aa27.89■■■□□ 2.06
EFCAB11-202ENST00000538485 NBPF8Q3BBV2 869 aa27.87■■■□□ 2.05
EFCAB11-202ENST00000538485 DCAF11Q8TEB1 546 aa27.87■■■□□ 2.05
EFCAB11-202ENST00000538485 ZNF316A6NFI3 1004 aaPredicted RBP27.84■■■□□ 2.05
EFCAB11-202ENST00000538485 SYNMO15061 1565 aa27.84■■■□□ 2.05
EFCAB11-202ENST00000538485 PREX1Q8TCU6 1659 aa27.83■■■□□ 2.05
EFCAB11-202ENST00000538485 ESF1Q9H501 851 aaKnown RBP27.83■■■□□ 2.04
EFCAB11-202ENST00000538485 KDM2AQ9Y2K7 1162 aa27.83■■■□□ 2.04
EFCAB11-202ENST00000538485 FBXO31Q5XUX0 539 aaPredicted RBP27.81■■■□□ 2.04
EFCAB11-202ENST00000538485 KIF1BO60333 1816 aa27.81■■■□□ 2.04
EFCAB11-202ENST00000538485 UHRF1BP1Q6BDS2 1440 aa27.8■■■□□ 2.04
EFCAB11-202ENST00000538485 ZNF326Q5BKZ1 582 aaKnown RBP27.79■■■□□ 2.04
EFCAB11-202ENST00000538485 NEURL4Q96JN8 1562 aa27.79■■■□□ 2.04
EFCAB11-202ENST00000538485 PIK3C2BO00750 1634 aa27.79■■■□□ 2.04
EFCAB11-202ENST00000538485 ZMYM3Q14202 1370 aa27.78■■■□□ 2.04
EFCAB11-202ENST00000538485 ERVK-7P63135 1459 aa27.77■■■□□ 2.04
EFCAB11-202ENST00000538485 MROH2AA6NES4 1674 aa27.74■■■□□ 2.03
EFCAB11-202ENST00000538485 ADGRB3O60242 1522 aa27.73■■■□□ 2.03
EFCAB11-202ENST00000538485 IDI1Q13907 227 aa27.73■■■□□ 2.03
EFCAB11-202ENST00000538485 SLC52A1Q9NWF4 448 aa27.73■■■□□ 2.03
EFCAB11-202ENST00000538485 PRAG1Q86YV5 1406 aa27.72■■■□□ 2.03
EFCAB11-202ENST00000538485 CHGAP10645 457 aaKnown RBP27.72■■■□□ 2.03
EFCAB11-202ENST00000538485 SPATA31D1Q6ZQQ2 1576 aa27.72■■■□□ 2.03
EFCAB11-202ENST00000538485 FER1L4A9Z1Z3 1794 aa27.68■■■□□ 2.02
EFCAB11-202ENST00000538485 RALGAPBQ86X10 1494 aa27.66■■■□□ 2.02
EFCAB11-202ENST00000538485 STAC3Q96MF2 364 aa27.66■■■□□ 2.02
EFCAB11-202ENST00000538485 HIRIP3Q9BW71 556 aaPredicted RBP27.66■■■□□ 2.02
EFCAB11-202ENST00000538485 IFT172Q9UG01 1749 aa27.64■■■□□ 2.02
EFCAB11-202ENST00000538485 TRPM1Q7Z4N2 1603 aa27.63■■■□□ 2.01
EFCAB11-202ENST00000538485 MADDQ8WXG6 1647 aa27.62■■■□□ 2.01
EFCAB11-202ENST00000538485 TMEM131LA2VDJ0 1609 aa27.61■■■□□ 2.01
EFCAB11-202ENST00000538485 CEBPAP49715 358 aaPredicted RBP27.6■■■□□ 2.01
EFCAB11-202ENST00000538485 EIF4G2P78344 907 aaKnown RBP eCLIP27.59■■■□□ 2.01
EFCAB11-202ENST00000538485 C3P01024 1663 aa27.59■■■□□ 2.01
EFCAB11-202ENST00000538485 MYO5BQ9ULV0 1848 aa27.59■■■□□ 2.01
EFCAB11-202ENST00000538485 MYOM2P54296 1465 aa27.59■■■□□ 2.01
EFCAB11-202ENST00000538485 PPLO60437 1756 aa27.58■■■□□ 2.01
EFCAB11-202ENST00000538485 HSPA5P11021 654 aaKnown RBP27.58■■■□□ 2.01
EFCAB11-202ENST00000538485 RPGRIP1LQ68CZ1 1315 aa27.57■■■□□ 2
EFCAB11-202ENST00000538485 ROCK2O75116 1388 aaKnown RBP27.57■■■□□ 2
EFCAB11-202ENST00000538485 ADGRF5Q8IZF2 1346 aa27.57■■■□□ 2
EFCAB11-202ENST00000538485 NBPF1Q3BBV0 1214 aa27.57■■■□□ 2
EFCAB11-202ENST00000538485 TNRQ92752 1358 aa27.56■■■□□ 2
EFCAB11-202ENST00000538485 CARD11Q9BXL7 1154 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms