RNA–Protein interactions for RNA: ENST00000538451.1

LDHA-216, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,345 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-216ENST00000538451 CCER1Q8TC90 406 aaPredicted RBP14.89□□□□□ -0.03
LDHA-216ENST00000538451 GCC2Q8IWJ2 1684 aa14.88□□□□□ -0.03
LDHA-216ENST00000538451 ARID4BQ4LE39 1312 aaPredicted RBP14.88□□□□□ -0.03
LDHA-216ENST00000538451 ZFYVE16Q7Z3T8 1539 aa14.88□□□□□ -0.03
LDHA-216ENST00000538451 PLXNC1O60486 1568 aa14.86□□□□□ -0.03
LDHA-216ENST00000538451 ANKRD50Q9ULJ7 1429 aa14.86□□□□□ -0.03
LDHA-216ENST00000538451 DUOX2Q9NRD8 1548 aa14.85□□□□□ -0.03
LDHA-216ENST00000538451 TRIM52Q96A61 297 aa14.85□□□□□ -0.03
LDHA-216ENST00000538451 MLH3Q9UHC1 1453 aa14.85□□□□□ -0.03
LDHA-216ENST00000538451 ATP7AQ04656 1500 aa14.84□□□□□ -0.03
LDHA-216ENST00000538451 YEATS2Q9ULM3 1422 aa14.84□□□□□ -0.03
LDHA-216ENST00000538451 KDM5CP41229 1560 aa14.83□□□□□ -0.04
LDHA-216ENST00000538451 ZEB1P37275 1124 aaPredicted RBP14.83□□□□□ -0.04
LDHA-216ENST00000538451 ERBINQ96RT1 1412 aa14.83□□□□□ -0.04
LDHA-216ENST00000538451 CLSPNQ9HAW4 1339 aa14.82□□□□□ -0.04
LDHA-216ENST00000538451 HECW2Q9P2P5 1572 aa14.82□□□□□ -0.04
LDHA-216ENST00000538451 INO80Q9ULG1 1556 aaPredicted RBP14.82□□□□□ -0.04
LDHA-216ENST00000538451 ATP10AO60312 1499 aa14.81□□□□□ -0.04
LDHA-216ENST00000538451 BCORL1Q5H9F3 1711 aa14.8□□□□□ -0.04
LDHA-216ENST00000538451 RNF39Q9H2S5 420 aa14.79□□□□□ -0.04
LDHA-216ENST00000538451 ADAMTSL3P82987 1691 aa14.79□□□□□ -0.04
LDHA-216ENST00000538451 DHX29Q7Z478 1369 aaKnown RBP14.79□□□□□ -0.04
LDHA-216ENST00000538451 KANK1Q14678 1352 aa14.76□□□□□ -0.05
LDHA-216ENST00000538451 KIDINS220Q9ULH0 1771 aa14.76□□□□□ -0.05
LDHA-216ENST00000538451 A2MP01023 1474 aa14.76□□□□□ -0.05
LDHA-216ENST00000538451 PTPRMP28827 1452 aa14.76□□□□□ -0.05
LDHA-216ENST00000538451 DHX57Q6P158 1386 aaKnown RBP14.75□□□□□ -0.05
LDHA-216ENST00000538451 MLECQ14165 292 aa14.74□□□□□ -0.05
LDHA-216ENST00000538451 NUP155O75694 1391 aa14.74□□□□□ -0.05
LDHA-216ENST00000538451 DIP2CQ9Y2E4 1556 aa14.74□□□□□ -0.05
LDHA-216ENST00000538451 MADDQ8WXG6 1647 aa14.74□□□□□ -0.05
LDHA-216ENST00000538451 EIF2AK4Q9P2K8 1649 aaKnown RBP14.74□□□□□ -0.05
LDHA-216ENST00000538451 KIF3BO15066 747 aa14.73□□□□□ -0.05
LDHA-216ENST00000538451 REREQ9P2R6 1566 aa14.73□□□□□ -0.05
LDHA-216ENST00000538451 MPHOSPH9Q99550 1183 aa14.72□□□□□ -0.05
LDHA-216ENST00000538451 SIGLEC1Q9BZZ2 1709 aa14.72□□□□□ -0.05
LDHA-216ENST00000538451 ABCA6Q8N139 1617 aa14.72□□□□□ -0.05
LDHA-216ENST00000538451 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.7□□□□□ -0.06
LDHA-216ENST00000538451 RNF216Q9NWF9 866 aaPredicted RBP14.69□□□□□ -0.06
LDHA-216ENST00000538451 RIMS1Q86UR5 1692 aaKnown RBP14.69□□□□□ -0.06
LDHA-216ENST00000538451 AGLP35573 1532 aa14.68□□□□□ -0.06
LDHA-216ENST00000538451 KDM5DQ9BY66 1539 aa14.68□□□□□ -0.06
LDHA-216ENST00000538451 UNC13BO14795 1591 aa14.68□□□□□ -0.06
LDHA-216ENST00000538451 FER1L4A9Z1Z3 1794 aa14.67□□□□□ -0.06
LDHA-216ENST00000538451 GGT6Q6P531 493 aa14.66□□□□□ -0.06
LDHA-216ENST00000538451 ESF1Q9H501 851 aaKnown RBP14.66□□□□□ -0.06
LDHA-216ENST00000538451 RTN4Q9NQC3 1192 aaKnown RBP14.66□□□□□ -0.06
LDHA-216ENST00000538451 PKD2Q13563 968 aa14.65□□□□□ -0.06
LDHA-216ENST00000538451 FAM135AQ9P2D6 1515 aa14.64□□□□□ -0.07
LDHA-216ENST00000538451 TIMELESSQ9UNS1 1208 aa14.64□□□□□ -0.07
LDHA-216ENST00000538451 DEPDC5O75140 1603 aa14.63□□□□□ -0.07
LDHA-216ENST00000538451 IQGAP3Q86VI3 1631 aa14.63□□□□□ -0.07
LDHA-216ENST00000538451 WASHC2CQ9Y4E1 1318 aa14.63□□□□□ -0.07
LDHA-216ENST00000538451 PZPP20742 1482 aa14.62□□□□□ -0.07
LDHA-216ENST00000538451 PRDM15P57071 1507 aaPredicted RBP14.62□□□□□ -0.07
LDHA-216ENST00000538451 RNF17Q9BXT8 1623 aaKnown RBP14.62□□□□□ -0.07
LDHA-216ENST00000538451 CNTLNQ9NXG0 1405 aa14.6□□□□□ -0.07
LDHA-216ENST00000538451 SLC24A1O60721 1099 aa14.6□□□□□ -0.07
LDHA-216ENST00000538451 LMTK2Q8IWU2 1503 aa14.57□□□□□ -0.08
LDHA-216ENST00000538451 NEUROD1Q13562 356 aa14.57□□□□□ -0.08
LDHA-216ENST00000538451 VWDEQ8N2E2 1590 aa14.57□□□□□ -0.08
LDHA-216ENST00000538451 LMTK3Q96Q04 1460 aa14.56□□□□□ -0.08
LDHA-216ENST00000538451 TONSLQ96HA7 1378 aa14.56□□□□□ -0.08
LDHA-216ENST00000538451 ANKRD30BQ9BXX2 1392 aa14.56□□□□□ -0.08
LDHA-216ENST00000538451 TET3O43151 1660 aa14.56□□□□□ -0.08
LDHA-216ENST00000538451 ZC3H13Q5T200 1668 aaKnown RBP14.56□□□□□ -0.08
LDHA-216ENST00000538451 CEBPAP49715 358 aaPredicted RBP14.56□□□□□ -0.08
LDHA-216ENST00000538451 RPRD2Q5VT52 1461 aaKnown RBP14.55□□□□□ -0.08
LDHA-216ENST00000538451 MROH1Q8NDA8 1641 aa14.53□□□□□ -0.08
LDHA-216ENST00000538451 CCDC144AA2RUR9 1427 aa14.53□□□□□ -0.08
LDHA-216ENST00000538451 SIN3AQ96ST3 1273 aa14.52□□□□□ -0.08
LDHA-216ENST00000538451 MROH2AA6NES4 1674 aa14.52□□□□□ -0.09
LDHA-216ENST00000538451 C3P01024 1663 aa14.52□□□□□ -0.09
LDHA-216ENST00000538451 ZMYM3Q14202 1370 aa14.52□□□□□ -0.09
LDHA-216ENST00000538451 UHRF1BP1Q6BDS2 1440 aa14.52□□□□□ -0.09
LDHA-216ENST00000538451 ABCC3O15438 1527 aa14.51□□□□□ -0.09
LDHA-216ENST00000538451 EFCAB6Q5THR3 1501 aa14.51□□□□□ -0.09
LDHA-216ENST00000538451 C1QBPQ07021 282 aaKnown RBP14.51□□□□□ -0.09
LDHA-216ENST00000538451 AMER1Q5JTC6 1135 aaPredicted RBP14.51□□□□□ -0.09
LDHA-216ENST00000538451 PREX1Q8TCU6 1659 aa14.51□□□□□ -0.09
LDHA-216ENST00000538451 ARHGAP31Q2M1Z3 1444 aa14.51□□□□□ -0.09
LDHA-216ENST00000538451 SLC4A2P04920 1241 aa14.5□□□□□ -0.09
LDHA-216ENST00000538451 HSPA2P54652 639 aa14.49□□□□□ -0.09
LDHA-216ENST00000538451 NPATQ14207 1427 aa14.49□□□□□ -0.09
LDHA-216ENST00000538451 CLTCQ00610 1675 aaKnown RBP14.48□□□□□ -0.09
LDHA-216ENST00000538451 CEP152O94986 1710 aa14.48□□□□□ -0.09
LDHA-216ENST00000538451 E9PCH4 1651 aa14.47□□□□□ -0.09
LDHA-216ENST00000538451 CAMSAP1Q5T5Y3 1602 aa14.47□□□□□ -0.09
LDHA-216ENST00000538451 SETD1BQ9UPS6 1966 aaKnown RBP14.47□□□□□ -0.09
LDHA-216ENST00000538451 PTPRTO14522 1441 aa14.46□□□□□ -0.09
LDHA-216ENST00000538451 TRPM2O94759 1503 aa14.46□□□□□ -0.1
LDHA-216ENST00000538451 STAC3Q96MF2 364 aa14.45□□□□□ -0.1
LDHA-216ENST00000538451 SLC52A1Q9NWF4 448 aa14.45□□□□□ -0.1
LDHA-216ENST00000538451 SPHKAPQ2M3C7 1700 aa14.45□□□□□ -0.1
LDHA-216ENST00000538451 PPP1R15AO75807 674 aaPredicted RBP14.41□□□□□ -0.1
LDHA-216ENST00000538451 PLA2R1Q13018 1463 aa14.4□□□□□ -0.1
LDHA-216ENST00000538451 NOS1P29475 1434 aa14.4□□□□□ -0.1
LDHA-216ENST00000538451 L3MBTL2Q969R5 705 aa14.4□□□□□ -0.1
LDHA-216ENST00000538451 STAG3Q9UJ98 1225 aa14.39□□□□□ -0.11
LDHA-216ENST00000538451 NEURL4Q96JN8 1562 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms