RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 NCOA1Q15788 1441 aa15.7■□□□□ 0.1
TNFRSF1A-211ENST00000538363 YEATS2Q9ULM3 1422 aa15.7■□□□□ 0.1
TNFRSF1A-211ENST00000538363 NAIPQ13075 1403 aa15.68■□□□□ 0.1
TNFRSF1A-211ENST00000538363 PLXNC1O60486 1568 aa15.68■□□□□ 0.1
TNFRSF1A-211ENST00000538363 HRCP23327 699 aa15.68■□□□□ 0.1
TNFRSF1A-211ENST00000538363 RTEL1-TNFRSF6BF6WH68 1400 aa15.68■□□□□ 0.1
TNFRSF1A-211ENST00000538363 ADGRL2O95490 1459 aa15.67■□□□□ 0.1
TNFRSF1A-211ENST00000538363 GCC2Q8IWJ2 1684 aa15.67■□□□□ 0.1
TNFRSF1A-211ENST00000538363 DCAF8L1A6NGE4 600 aa15.66■□□□□ 0.1
TNFRSF1A-211ENST00000538363 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.66■□□□□ 0.1
TNFRSF1A-211ENST00000538363 ANKRD50Q9ULJ7 1429 aa15.66■□□□□ 0.1
TNFRSF1A-211ENST00000538363 MLH3Q9UHC1 1453 aa15.65■□□□□ 0.1
TNFRSF1A-211ENST00000538363 DUOX2Q9NRD8 1548 aa15.63■□□□□ 0.09
TNFRSF1A-211ENST00000538363 KIF3BO15066 747 aa15.62■□□□□ 0.09
TNFRSF1A-211ENST00000538363 MAGI2Q86UL8 1455 aa15.61■□□□□ 0.09
TNFRSF1A-211ENST00000538363 SLC4A1APQ9BWU0 796 aaKnown RBP15.59■□□□□ 0.09
TNFRSF1A-211ENST00000538363 NUP155O75694 1391 aa15.59■□□□□ 0.09
TNFRSF1A-211ENST00000538363 KANK1Q14678 1352 aa15.59■□□□□ 0.09
TNFRSF1A-211ENST00000538363 DHX29Q7Z478 1369 aaKnown RBP15.59■□□□□ 0.09
TNFRSF1A-211ENST00000538363 ARID4BQ4LE39 1312 aaPredicted RBP15.58■□□□□ 0.08
TNFRSF1A-211ENST00000538363 A2MP01023 1474 aa15.58■□□□□ 0.08
TNFRSF1A-211ENST00000538363 REREQ9P2R6 1566 aa15.58■□□□□ 0.08
TNFRSF1A-211ENST00000538363 GGT6Q6P531 493 aa15.57■□□□□ 0.08
TNFRSF1A-211ENST00000538363 ERBINQ96RT1 1412 aa15.57■□□□□ 0.08
TNFRSF1A-211ENST00000538363 ZEB1P37275 1124 aaPredicted RBP15.56■□□□□ 0.08
TNFRSF1A-211ENST00000538363 MPHOSPH9Q99550 1183 aa15.56■□□□□ 0.08
TNFRSF1A-211ENST00000538363 EIF2AK4Q9P2K8 1649 aaKnown RBP15.55■□□□□ 0.08
TNFRSF1A-211ENST00000538363 ATP10AO60312 1499 aa15.55■□□□□ 0.08
TNFRSF1A-211ENST00000538363 ESF1Q9H501 851 aaKnown RBP15.55■□□□□ 0.08
TNFRSF1A-211ENST00000538363 DHX57Q6P158 1386 aaKnown RBP15.53■□□□□ 0.08
TNFRSF1A-211ENST00000538363 BCORL1Q5H9F3 1711 aa15.53■□□□□ 0.08
TNFRSF1A-211ENST00000538363 FER1L4A9Z1Z3 1794 aa15.52■□□□□ 0.08
TNFRSF1A-211ENST00000538363 MLECQ14165 292 aa15.52■□□□□ 0.08
TNFRSF1A-211ENST00000538363 CEP152O94986 1710 aa15.51■□□□□ 0.07
TNFRSF1A-211ENST00000538363 MROH1Q8NDA8 1641 aa15.51■□□□□ 0.07
TNFRSF1A-211ENST00000538363 RNF17Q9BXT8 1623 aaKnown RBP15.51■□□□□ 0.07
TNFRSF1A-211ENST00000538363 NEUROD1Q13562 356 aa15.5■□□□□ 0.07
TNFRSF1A-211ENST00000538363 DEPDC5O75140 1603 aa15.5■□□□□ 0.07
TNFRSF1A-211ENST00000538363 MADDQ8WXG6 1647 aa15.5■□□□□ 0.07
TNFRSF1A-211ENST00000538363 AGLP35573 1532 aa15.49■□□□□ 0.07
TNFRSF1A-211ENST00000538363 PKD2Q13563 968 aa15.49■□□□□ 0.07
TNFRSF1A-211ENST00000538363 UNC13BO14795 1591 aa15.49■□□□□ 0.07
TNFRSF1A-211ENST00000538363 WASHC2CQ9Y4E1 1318 aa15.48■□□□□ 0.07
TNFRSF1A-211ENST00000538363 RIMS1Q86UR5 1692 aaKnown RBP15.48■□□□□ 0.07
TNFRSF1A-211ENST00000538363 CLTCQ00610 1675 aaKnown RBP15.48■□□□□ 0.07
TNFRSF1A-211ENST00000538363 CLSPNQ9HAW4 1339 aa15.47■□□□□ 0.07
TNFRSF1A-211ENST00000538363 PRDM15P57071 1507 aaPredicted RBP15.46■□□□□ 0.07
TNFRSF1A-211ENST00000538363 ADAMTSL3P82987 1691 aa15.45■□□□□ 0.06
TNFRSF1A-211ENST00000538363 ZC3H13Q5T200 1668 aaKnown RBP15.43■□□□□ 0.06
TNFRSF1A-211ENST00000538363 FAM135AQ9P2D6 1515 aa15.43■□□□□ 0.06
TNFRSF1A-211ENST00000538363 CAMSAP1Q5T5Y3 1602 aa15.42■□□□□ 0.06
TNFRSF1A-211ENST00000538363 PZPP20742 1482 aa15.41■□□□□ 0.06
TNFRSF1A-211ENST00000538363 SIN3AQ96ST3 1273 aa15.41■□□□□ 0.06
TNFRSF1A-211ENST00000538363 IQGAP3Q86VI3 1631 aa15.41■□□□□ 0.06
TNFRSF1A-211ENST00000538363 KDM5DQ9BY66 1539 aa15.4■□□□□ 0.06
TNFRSF1A-211ENST00000538363 ABCC3O15438 1527 aa15.39■□□□□ 0.05
TNFRSF1A-211ENST00000538363 KDM4FA0A1W2PPD8 638 aa15.39■□□□□ 0.05
TNFRSF1A-211ENST00000538363 MROH2AA6NES4 1674 aa15.38■□□□□ 0.05
TNFRSF1A-211ENST00000538363 C3P01024 1663 aa15.38■□□□□ 0.05
TNFRSF1A-211ENST00000538363 VWDEQ8N2E2 1590 aa15.38■□□□□ 0.05
TNFRSF1A-211ENST00000538363 TET3O43151 1660 aa15.37■□□□□ 0.05
TNFRSF1A-211ENST00000538363 TONSLQ96HA7 1378 aa15.36■□□□□ 0.05
TNFRSF1A-211ENST00000538363 CFAP65Q6ZU64 1925 aaKnown RBP15.36■□□□□ 0.05
TNFRSF1A-211ENST00000538363 E9PCH4 1651 aa15.35■□□□□ 0.05
TNFRSF1A-211ENST00000538363 EFCAB6Q5THR3 1501 aa15.34■□□□□ 0.05
TNFRSF1A-211ENST00000538363 CHGAP10645 457 aaKnown RBP15.33■□□□□ 0.04
TNFRSF1A-211ENST00000538363 ANKRD30BQ9BXX2 1392 aa15.32■□□□□ 0.04
TNFRSF1A-211ENST00000538363 CCDC144AA2RUR9 1427 aa15.32■□□□□ 0.04
TNFRSF1A-211ENST00000538363 PREX1Q8TCU6 1659 aa15.32■□□□□ 0.04
TNFRSF1A-211ENST00000538363 LMTK2Q8IWU2 1503 aa15.3■□□□□ 0.04
TNFRSF1A-211ENST00000538363 TIMELESSQ9UNS1 1208 aa15.3■□□□□ 0.04
TNFRSF1A-211ENST00000538363 SPHKAPQ2M3C7 1700 aa15.29■□□□□ 0.04
TNFRSF1A-211ENST00000538363 STAG3Q9UJ98 1225 aa15.29■□□□□ 0.04
TNFRSF1A-211ENST00000538363 PTPRMP28827 1452 aa15.28■□□□□ 0.04
TNFRSF1A-211ENST00000538363 RGL3Q3MIN7 710 aa15.28■□□□□ 0.04
TNFRSF1A-211ENST00000538363 CNTLNQ9NXG0 1405 aa15.27■□□□□ 0.04
TNFRSF1A-211ENST00000538363 MYO3AQ8NEV4 1616 aa15.26■□□□□ 0.03
TNFRSF1A-211ENST00000538363 ZNF326Q5BKZ1 582 aaKnown RBP15.26■□□□□ 0.03
TNFRSF1A-211ENST00000538363 RPRD2Q5VT52 1461 aaKnown RBP15.26■□□□□ 0.03
TNFRSF1A-211ENST00000538363 ZMYM3Q14202 1370 aa15.25■□□□□ 0.03
TNFRSF1A-211ENST00000538363 NPATQ14207 1427 aa15.25■□□□□ 0.03
TNFRSF1A-211ENST00000538363 SYNMO15061 1565 aa15.24■□□□□ 0.03
TNFRSF1A-211ENST00000538363 KDM2AQ9Y2K7 1162 aa15.24■□□□□ 0.03
TNFRSF1A-211ENST00000538363 UGGT1Q9NYU2 1555 aa15.24■□□□□ 0.03
TNFRSF1A-211ENST00000538363 ERVK-7P63135 1459 aa15.23■□□□□ 0.03
TNFRSF1A-211ENST00000538363 CEBPAP49715 358 aaPredicted RBP15.23■□□□□ 0.03
TNFRSF1A-211ENST00000538363 FBXO31Q5XUX0 539 aaPredicted RBP15.23■□□□□ 0.03
TNFRSF1A-211ENST00000538363 ARHGAP31Q2M1Z3 1444 aa15.23■□□□□ 0.03
TNFRSF1A-211ENST00000538363 DCAF11Q8TEB1 546 aa15.22■□□□□ 0.03
TNFRSF1A-211ENST00000538363 L3MBTL2Q969R5 705 aa15.22■□□□□ 0.03
TNFRSF1A-211ENST00000538363 SLC52A1Q9NWF4 448 aa15.22■□□□□ 0.03
TNFRSF1A-211ENST00000538363 SPATA31D1Q6ZQQ2 1576 aa15.22■□□□□ 0.03
TNFRSF1A-211ENST00000538363 MYO5BQ9ULV0 1848 aa15.2■□□□□ 0.02
TNFRSF1A-211ENST00000538363 TRPM2O94759 1503 aa15.2■□□□□ 0.02
TNFRSF1A-211ENST00000538363 CLTCL1P53675 1640 aa15.2■□□□□ 0.02
TNFRSF1A-211ENST00000538363 PTPRTO14522 1441 aa15.19■□□□□ 0.02
TNFRSF1A-211ENST00000538363 PPP1R15AO75807 674 aaPredicted RBP15.19■□□□□ 0.02
TNFRSF1A-211ENST00000538363 KIF1BO60333 1816 aa15.19■□□□□ 0.02
TNFRSF1A-211ENST00000538363 ZNF142P52746 1687 aaPredicted RBP15.19■□□□□ 0.02
TNFRSF1A-211ENST00000538363 PIK3C2BO00750 1634 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms