RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 KIF3BO15066 747 aa17.19■□□□□ 0.34
SPARC-207ENST00000537849 UNC13BO14795 1591 aa17.19■□□□□ 0.34
SPARC-207ENST00000537849 DIP2CQ9Y2E4 1556 aa17.19■□□□□ 0.34
SPARC-207ENST00000537849 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.18■□□□□ 0.34
SPARC-207ENST00000537849 SIN3AQ96ST3 1273 aa17.17■□□□□ 0.34
SPARC-207ENST00000537849 EIF2AK4Q9P2K8 1649 aaKnown RBP17.17■□□□□ 0.34
SPARC-207ENST00000537849 PKD2Q13563 968 aa17.16■□□□□ 0.34
SPARC-207ENST00000537849 FOXD1Q16676 465 aa17.16■□□□□ 0.34
SPARC-207ENST00000537849 ATP10AO60312 1499 aa17.16■□□□□ 0.34
SPARC-207ENST00000537849 DEPDC5O75140 1603 aa17.14■□□□□ 0.33
SPARC-207ENST00000537849 ANKRD30BQ9BXX2 1392 aa17.14■□□□□ 0.33
SPARC-207ENST00000537849 BCORL1Q5H9F3 1711 aa17.13■□□□□ 0.33
SPARC-207ENST00000537849 IQGAP3Q86VI3 1631 aa17.13■□□□□ 0.33
SPARC-207ENST00000537849 FAM135AQ9P2D6 1515 aa17.12■□□□□ 0.33
SPARC-207ENST00000537849 VWDEQ8N2E2 1590 aa17.11■□□□□ 0.33
SPARC-207ENST00000537849 MROH1Q8NDA8 1641 aa17.11■□□□□ 0.33
SPARC-207ENST00000537849 RNF17Q9BXT8 1623 aaKnown RBP17.1■□□□□ 0.33
SPARC-207ENST00000537849 NEUROD1Q13562 356 aa17.09■□□□□ 0.33
SPARC-207ENST00000537849 REREQ9P2R6 1566 aa17.09■□□□□ 0.33
SPARC-207ENST00000537849 GGT6Q6P531 493 aa17.08■□□□□ 0.32
SPARC-207ENST00000537849 KANK1Q14678 1352 aa17.07■□□□□ 0.32
SPARC-207ENST00000537849 AGLP35573 1532 aa17.06■□□□□ 0.32
SPARC-207ENST00000537849 PRDM15P57071 1507 aaPredicted RBP17.06■□□□□ 0.32
SPARC-207ENST00000537849 ARHGEF40Q8TER5 1519 aa17.06■□□□□ 0.32
SPARC-207ENST00000537849 TIMELESSQ9UNS1 1208 aa17.05■□□□□ 0.32
SPARC-207ENST00000537849 SIGLEC1Q9BZZ2 1709 aa17.04■□□□□ 0.32
SPARC-207ENST00000537849 LMTK2Q8IWU2 1503 aa17.03■□□□□ 0.32
SPARC-207ENST00000537849 PLA2R1Q13018 1463 aa17.03■□□□□ 0.32
SPARC-207ENST00000537849 TET3O43151 1660 aa17.02■□□□□ 0.32
SPARC-207ENST00000537849 E9PCH4 1651 aa17.01■□□□□ 0.31
SPARC-207ENST00000537849 PPP6R1Q9UPN7 881 aa17.01■□□□□ 0.31
SPARC-207ENST00000537849 CEP152O94986 1710 aa17.01■□□□□ 0.31
SPARC-207ENST00000537849 WASHC2CQ9Y4E1 1318 aa17■□□□□ 0.31
SPARC-207ENST00000537849 RPRD2Q5VT52 1461 aaKnown RBP16.99■□□□□ 0.31
SPARC-207ENST00000537849 CFAP65Q6ZU64 1925 aaKnown RBP16.98■□□□□ 0.31
SPARC-207ENST00000537849 ABCC3O15438 1527 aa16.98■□□□□ 0.31
SPARC-207ENST00000537849 PTPRTO14522 1441 aa16.97■□□□□ 0.31
SPARC-207ENST00000537849 PPP1R15AO75807 674 aaPredicted RBP16.97■□□□□ 0.31
SPARC-207ENST00000537849 EFCAB6Q5THR3 1501 aa16.95■□□□□ 0.3
SPARC-207ENST00000537849 MLECQ14165 292 aa16.94■□□□□ 0.3
SPARC-207ENST00000537849 L3MBTL2Q969R5 705 aa16.94■□□□□ 0.3
SPARC-207ENST00000537849 TONSLQ96HA7 1378 aa16.93■□□□□ 0.3
SPARC-207ENST00000537849 ARHGAP31Q2M1Z3 1444 aa16.93■□□□□ 0.3
SPARC-207ENST00000537849 ARID4BQ4LE39 1312 aaPredicted RBP16.93■□□□□ 0.3
SPARC-207ENST00000537849 ZC3H13Q5T200 1668 aaKnown RBP16.92■□□□□ 0.3
SPARC-207ENST00000537849 NPATQ14207 1427 aa16.92■□□□□ 0.3
SPARC-207ENST00000537849 SPHKAPQ2M3C7 1700 aa16.92■□□□□ 0.3
SPARC-207ENST00000537849 CAMSAP1Q5T5Y3 1602 aa16.92■□□□□ 0.3
SPARC-207ENST00000537849 CCDC144AA2RUR9 1427 aa16.89■□□□□ 0.29
SPARC-207ENST00000537849 TRPM2O94759 1503 aa16.89■□□□□ 0.29
SPARC-207ENST00000537849 CLTCQ00610 1675 aaKnown RBP16.88■□□□□ 0.29
SPARC-207ENST00000537849 NOS1P29475 1434 aa16.87■□□□□ 0.29
SPARC-207ENST00000537849 CLTCL1P53675 1640 aa16.85■□□□□ 0.29
SPARC-207ENST00000537849 FBXO31Q5XUX0 539 aaPredicted RBP16.85■□□□□ 0.29
SPARC-207ENST00000537849 ZMYM3Q14202 1370 aa16.84■□□□□ 0.29
SPARC-207ENST00000537849 SPATA31E1Q6ZUB1 1445 aa16.84■□□□□ 0.29
SPARC-207ENST00000537849 CNTLNQ9NXG0 1405 aa16.84■□□□□ 0.29
SPARC-207ENST00000537849 RGL3Q3MIN7 710 aa16.83■□□□□ 0.28
SPARC-207ENST00000537849 NBPF8Q3BBV2 869 aa16.82■□□□□ 0.28
SPARC-207ENST00000537849 ESF1Q9H501 851 aaKnown RBP16.82■□□□□ 0.28
SPARC-207ENST00000537849 PREX1Q8TCU6 1659 aa16.81■□□□□ 0.28
SPARC-207ENST00000537849 UGGT1Q9NYU2 1555 aa16.81■□□□□ 0.28
SPARC-207ENST00000537849 SYNMO15061 1565 aa16.81■□□□□ 0.28
SPARC-207ENST00000537849 KIF1BO60333 1816 aa16.8■□□□□ 0.28
SPARC-207ENST00000537849 IDI1Q13907 227 aa16.8■□□□□ 0.28
SPARC-207ENST00000537849 DCAF11Q8TEB1 546 aa16.79■□□□□ 0.28
SPARC-207ENST00000537849 SLC52A1Q9NWF4 448 aa16.79■□□□□ 0.28
SPARC-207ENST00000537849 ERVK-7P63135 1459 aa16.79■□□□□ 0.28
SPARC-207ENST00000537849 PIK3C2BO00750 1634 aa16.78■□□□□ 0.28
SPARC-207ENST00000537849 NEURL4Q96JN8 1562 aa16.78■□□□□ 0.28
SPARC-207ENST00000537849 KDM2AQ9Y2K7 1162 aa16.78■□□□□ 0.28
SPARC-207ENST00000537849 MROH2AA6NES4 1674 aa16.78■□□□□ 0.28
SPARC-207ENST00000537849 UHRF1BP1Q6BDS2 1440 aa16.77■□□□□ 0.27
SPARC-207ENST00000537849 SPATA31D1Q6ZQQ2 1576 aa16.77■□□□□ 0.27
SPARC-207ENST00000537849 STAC3Q96MF2 364 aa16.75■□□□□ 0.27
SPARC-207ENST00000537849 FER1L4A9Z1Z3 1794 aa16.74■□□□□ 0.27
SPARC-207ENST00000537849 CEBPAP49715 358 aaPredicted RBP16.74■□□□□ 0.27
SPARC-207ENST00000537849 ADAMTSL3P82987 1691 aa16.73■□□□□ 0.27
SPARC-207ENST00000537849 CHGAP10645 457 aaKnown RBP16.72■□□□□ 0.27
SPARC-207ENST00000537849 ADGRB3O60242 1522 aa16.71■□□□□ 0.27
SPARC-207ENST00000537849 ZNF316A6NFI3 1004 aaPredicted RBP16.71■□□□□ 0.27
SPARC-207ENST00000537849 C3P01024 1663 aa16.71■□□□□ 0.27
SPARC-207ENST00000537849 RPGRIP1LQ68CZ1 1315 aa16.7■□□□□ 0.26
SPARC-207ENST00000537849 MYO5BQ9ULV0 1848 aa16.7■□□□□ 0.26
SPARC-207ENST00000537849 TMEM131LA2VDJ0 1609 aa16.7■□□□□ 0.26
SPARC-207ENST00000537849 PRAG1Q86YV5 1406 aa16.7■□□□□ 0.26
SPARC-207ENST00000537849 TNRQ92752 1358 aa16.69■□□□□ 0.26
SPARC-207ENST00000537849 ZNF326Q5BKZ1 582 aaKnown RBP16.69■□□□□ 0.26
SPARC-207ENST00000537849 IFT172Q9UG01 1749 aa16.68■□□□□ 0.26
SPARC-207ENST00000537849 MADDQ8WXG6 1647 aa16.68■□□□□ 0.26
SPARC-207ENST00000537849 RIMS1Q86UR5 1692 aaKnown RBP16.66■□□□□ 0.26
SPARC-207ENST00000537849 PPLO60437 1756 aa16.66■□□□□ 0.26
SPARC-207ENST00000537849 ADGRF5Q8IZF2 1346 aa16.66■□□□□ 0.26
SPARC-207ENST00000537849 NBPF1Q3BBV0 1214 aa16.64■□□□□ 0.25
SPARC-207ENST00000537849 RALGAPBQ86X10 1494 aa16.64■□□□□ 0.25
SPARC-207ENST00000537849 SETD1BQ9UPS6 1966 aaKnown RBP16.64■□□□□ 0.25
SPARC-207ENST00000537849 TRPM1Q7Z4N2 1603 aa16.63■□□□□ 0.25
SPARC-207ENST00000537849 A2ML1A8K2U0 1454 aa16.63■□□□□ 0.25
SPARC-207ENST00000537849 MYOM2P54296 1465 aa16.63■□□□□ 0.25
SPARC-207ENST00000537849 NRXN1Q9ULB1 1477 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms