RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 ACIN1Q9UKV3 1341 aaKnown RBP18.86■□□□□ 0.61
CDK5RAP3-202ENST00000536708 KDM5DQ9BY66 1539 aa18.86■□□□□ 0.61
CDK5RAP3-202ENST00000536708 SIGLEC1Q9BZZ2 1709 aa18.85■□□□□ 0.61
CDK5RAP3-202ENST00000536708 MAGI2Q86UL8 1455 aa18.84■□□□□ 0.61
CDK5RAP3-202ENST00000536708 MROH1Q8NDA8 1641 aa18.84■□□□□ 0.61
CDK5RAP3-202ENST00000536708 A2MP01023 1474 aa18.84■□□□□ 0.61
CDK5RAP3-202ENST00000536708 IQGAP3Q86VI3 1631 aa18.83■□□□□ 0.61
CDK5RAP3-202ENST00000536708 FAM135AQ9P2D6 1515 aa18.83■□□□□ 0.6
CDK5RAP3-202ENST00000536708 ARHGEF40Q8TER5 1519 aa18.82■□□□□ 0.6
CDK5RAP3-202ENST00000536708 NUP155O75694 1391 aa18.81■□□□□ 0.6
CDK5RAP3-202ENST00000536708 FOXD1Q16676 465 aa18.81■□□□□ 0.6
CDK5RAP3-202ENST00000536708 DHX29Q7Z478 1369 aaKnown RBP18.8■□□□□ 0.6
CDK5RAP3-202ENST00000536708 RNF17Q9BXT8 1623 aaKnown RBP18.8■□□□□ 0.6
CDK5RAP3-202ENST00000536708 BCORL1Q5H9F3 1711 aa18.8■□□□□ 0.6
CDK5RAP3-202ENST00000536708 PRDM15P57071 1507 aaPredicted RBP18.79■□□□□ 0.6
CDK5RAP3-202ENST00000536708 MPHOSPH9Q99550 1183 aa18.79■□□□□ 0.6
CDK5RAP3-202ENST00000536708 CEP152O94986 1710 aa18.79■□□□□ 0.6
CDK5RAP3-202ENST00000536708 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.78■□□□□ 0.62e-7■■□□□ 13.2
CDK5RAP3-202ENST00000536708 NEUROD1Q13562 356 aa18.77■□□□□ 0.59
CDK5RAP3-202ENST00000536708 SLC4A1APQ9BWU0 796 aaKnown RBP18.77■□□□□ 0.59
CDK5RAP3-202ENST00000536708 KIF3BO15066 747 aa18.75■□□□□ 0.59
CDK5RAP3-202ENST00000536708 VWDEQ8N2E2 1590 aa18.75■□□□□ 0.59
CDK5RAP3-202ENST00000536708 E9PCH4 1651 aa18.74■□□□□ 0.59
CDK5RAP3-202ENST00000536708 SIN3AQ96ST3 1273 aa18.73■□□□□ 0.59
CDK5RAP3-202ENST00000536708 REREQ9P2R6 1566 aa18.72■□□□□ 0.59
CDK5RAP3-202ENST00000536708 TET3O43151 1660 aa18.72■□□□□ 0.59
CDK5RAP3-202ENST00000536708 CENPBP07199 599 aaPredicted RBP18.72■□□□□ 0.59
CDK5RAP3-202ENST00000536708 ATP10AO60312 1499 aa18.71■□□□□ 0.59
CDK5RAP3-202ENST00000536708 PKD2Q13563 968 aa18.71■□□□□ 0.59
CDK5RAP3-202ENST00000536708 ANKRD30BQ9BXX2 1392 aa18.67■□□□□ 0.58
CDK5RAP3-202ENST00000536708 EFCAB6Q5THR3 1501 aa18.66■□□□□ 0.58
CDK5RAP3-202ENST00000536708 CAMSAP1Q5T5Y3 1602 aa18.66■□□□□ 0.58
CDK5RAP3-202ENST00000536708 CFAP65Q6ZU64 1925 aaKnown RBP18.66■□□□□ 0.58
CDK5RAP3-202ENST00000536708 ABCC3O15438 1527 aa18.65■□□□□ 0.58
CDK5RAP3-202ENST00000536708 SPHKAPQ2M3C7 1700 aa18.65■□□□□ 0.58
CDK5RAP3-202ENST00000536708 GGT6Q6P531 493 aa18.65■□□□□ 0.58
CDK5RAP3-202ENST00000536708 ZC3H13Q5T200 1668 aaKnown RBP18.64■□□□□ 0.57
CDK5RAP3-202ENST00000536708 AGLP35573 1532 aa18.64■□□□□ 0.57
CDK5RAP3-202ENST00000536708 KANK1Q14678 1352 aa18.63■□□□□ 0.57
CDK5RAP3-202ENST00000536708 LMTK2Q8IWU2 1503 aa18.62■□□□□ 0.57
CDK5RAP3-202ENST00000536708 PLA2R1Q13018 1463 aa18.61■□□□□ 0.57
CDK5RAP3-202ENST00000536708 GTF3C3Q9Y5Q9 886 aa18.61■□□□□ 0.57
CDK5RAP3-202ENST00000536708 CLTCQ00610 1675 aaKnown RBP18.6■□□□□ 0.57
CDK5RAP3-202ENST00000536708 RPRD2Q5VT52 1461 aaKnown RBP18.6■□□□□ 0.57
CDK5RAP3-202ENST00000536708 MIER1Q8N108 512 aa18.58■□□□□ 0.56
CDK5RAP3-202ENST00000536708 CLTCL1P53675 1640 aa18.57■□□□□ 0.56
CDK5RAP3-202ENST00000536708 UGGT1Q9NYU2 1555 aa18.57■□□□□ 0.56
CDK5RAP3-202ENST00000536708 TRPM2O94759 1503 aa18.56■□□□□ 0.56
CDK5RAP3-202ENST00000536708 MLECQ14165 292 aa18.55■□□□□ 0.56
CDK5RAP3-202ENST00000536708 NPATQ14207 1427 aa18.55■□□□□ 0.56
CDK5RAP3-202ENST00000536708 TONSLQ96HA7 1378 aa18.55■□□□□ 0.56
CDK5RAP3-202ENST00000536708 WASHC2CQ9Y4E1 1318 aa18.54■□□□□ 0.56
CDK5RAP3-202ENST00000536708 CCDC144AA2RUR9 1427 aa18.52■□□□□ 0.56
CDK5RAP3-202ENST00000536708 PREX1Q8TCU6 1659 aa18.52■□□□□ 0.56
CDK5RAP3-202ENST00000536708 ARID4BQ4LE39 1312 aaPredicted RBP18.51■□□□□ 0.55
CDK5RAP3-202ENST00000536708 MROH2AA6NES4 1674 aa18.5■□□□□ 0.55
CDK5RAP3-202ENST00000536708 PTPRTO14522 1441 aa18.5■□□□□ 0.55
CDK5RAP3-202ENST00000536708 SYNMO15061 1565 aa18.5■□□□□ 0.55
CDK5RAP3-202ENST00000536708 FER1L4A9Z1Z3 1794 aa18.5■□□□□ 0.55
CDK5RAP3-202ENST00000536708 KIF1BO60333 1816 aa18.47■□□□□ 0.55
CDK5RAP3-202ENST00000536708 L3MBTL2Q969R5 705 aa18.45■□□□□ 0.54
CDK5RAP3-202ENST00000536708 TIMELESSQ9UNS1 1208 aa18.45■□□□□ 0.54
CDK5RAP3-202ENST00000536708 ARHGAP31Q2M1Z3 1444 aa18.45■□□□□ 0.54
CDK5RAP3-202ENST00000536708 PIK3C2BO00750 1634 aa18.45■□□□□ 0.54
CDK5RAP3-202ENST00000536708 MYT1Q01538 1121 aa18.44■□□□□ 0.54
CDK5RAP3-202ENST00000536708 MYO5BQ9ULV0 1848 aa18.44■□□□□ 0.54
CDK5RAP3-202ENST00000536708 NOS1P29475 1434 aa18.43■□□□□ 0.54
CDK5RAP3-202ENST00000536708 MADDQ8WXG6 1647 aa18.42■□□□□ 0.54
CDK5RAP3-202ENST00000536708 ERVK-7P63135 1459 aa18.42■□□□□ 0.54
CDK5RAP3-202ENST00000536708 CNTLNQ9NXG0 1405 aa18.41■□□□□ 0.54
CDK5RAP3-202ENST00000536708 SPATA31E1Q6ZUB1 1445 aa18.41■□□□□ 0.54
CDK5RAP3-202ENST00000536708 C3P01024 1663 aa18.41■□□□□ 0.54
CDK5RAP3-202ENST00000536708 PPP1R15AO75807 674 aaPredicted RBP18.4■□□□□ 0.54
CDK5RAP3-202ENST00000536708 RIMS1Q86UR5 1692 aaKnown RBP18.39■□□□□ 0.54
CDK5RAP3-202ENST00000536708 FBXO31Q5XUX0 539 aaPredicted RBP18.39■□□□□ 0.53
CDK5RAP3-202ENST00000536708 ADGRB3O60242 1522 aa18.39■□□□□ 0.53
CDK5RAP3-202ENST00000536708 SPATA31D1Q6ZQQ2 1576 aa18.39■□□□□ 0.53
CDK5RAP3-202ENST00000536708 IFT172Q9UG01 1749 aa18.39■□□□□ 0.53
CDK5RAP3-202ENST00000536708 RGL3Q3MIN7 710 aa18.38■□□□□ 0.53
CDK5RAP3-202ENST00000536708 PPP6R1Q9UPN7 881 aa18.36■□□□□ 0.53
CDK5RAP3-202ENST00000536708 ADAMTSL3P82987 1691 aa18.35■□□□□ 0.53
CDK5RAP3-202ENST00000536708 ZMYM3Q14202 1370 aa18.35■□□□□ 0.53
CDK5RAP3-202ENST00000536708 ESF1Q9H501 851 aaKnown RBP18.35■□□□□ 0.53
CDK5RAP3-202ENST00000536708 NBPF8Q3BBV2 869 aa18.34■□□□□ 0.53
CDK5RAP3-202ENST00000536708 ZNF326Q5BKZ1 582 aaKnown RBP18.34■□□□□ 0.53
CDK5RAP3-202ENST00000536708 YTHDC1Q96MU7 727 aaKnown RBP18.34■□□□□ 0.53
CDK5RAP3-202ENST00000536708 PPLO60437 1756 aa18.34■□□□□ 0.53
CDK5RAP3-202ENST00000536708 NEURL4Q96JN8 1562 aa18.33■□□□□ 0.52
CDK5RAP3-202ENST00000536708 DCAF11Q8TEB1 546 aa18.32■□□□□ 0.52
CDK5RAP3-202ENST00000536708 TMEM131LA2VDJ0 1609 aa18.32■□□□□ 0.52
CDK5RAP3-202ENST00000536708 KDM2AQ9Y2K7 1162 aa18.31■□□□□ 0.52
CDK5RAP3-202ENST00000536708 TRPM1Q7Z4N2 1603 aa18.31■□□□□ 0.52
CDK5RAP3-202ENST00000536708 CEBPAP49715 358 aaPredicted RBP18.3■□□□□ 0.52
CDK5RAP3-202ENST00000536708 CHGAP10645 457 aaKnown RBP18.29■□□□□ 0.52
CDK5RAP3-202ENST00000536708 PLPPR3Q6T4P5 718 aa18.29■□□□□ 0.52
CDK5RAP3-202ENST00000536708 PRAG1Q86YV5 1406 aa18.28■□□□□ 0.52
CDK5RAP3-202ENST00000536708 IDI1Q13907 227 aa18.28■□□□□ 0.52
CDK5RAP3-202ENST00000536708 UHRF1BP1Q6BDS2 1440 aa18.28■□□□□ 0.52
CDK5RAP3-202ENST00000536708 NEXMIFQ5QGS0 1516 aa18.26■□□□□ 0.51
CDK5RAP3-202ENST00000536708 RALGAPBQ86X10 1494 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms