RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 DDX10Q13206 875 aaKnown RBP32.11■■■□□ 2.73
HMGA2-206ENST00000536545 ATP10AO60312 1499 aa32.11■■■□□ 2.73
HMGA2-206ENST00000536545 POGZQ7Z3K3 1410 aa32.1■■■□□ 2.73
HMGA2-206ENST00000536545 EIF4G2P78344 907 aaKnown RBP eCLIP32.09■■■□□ 2.73
HMGA2-206ENST00000536545 CCDC144AA2RUR9 1427 aa32.08■■■□□ 2.73
HMGA2-206ENST00000536545 VWDEQ8N2E2 1590 aa32.06■■■□□ 2.72
HMGA2-206ENST00000536545 NEO1Q92859 1461 aa32.05■■■□□ 2.72
HMGA2-206ENST00000536545 SPATA31E1Q6ZUB1 1445 aa32.04■■■□□ 2.72
HMGA2-206ENST00000536545 MAP3K4Q9Y6R4 1608 aa32.04■■■□□ 2.72
HMGA2-206ENST00000536545 PRDM15P57071 1507 aaPredicted RBP32.03■■■□□ 2.72
HMGA2-206ENST00000536545 DHX29Q7Z478 1369 aaKnown RBP32.03■■■□□ 2.72
HMGA2-206ENST00000536545 RALGAPBQ86X10 1494 aa32.03■■■□□ 2.72
HMGA2-206ENST00000536545 MROH1Q8NDA8 1641 aa32.02■■■□□ 2.72
HMGA2-206ENST00000536545 CENPBP07199 599 aaPredicted RBP32.02■■■□□ 2.72
HMGA2-206ENST00000536545 E9PCH4 1651 aa32.02■■■□□ 2.72
HMGA2-206ENST00000536545 GLI2P10070 1586 aa32.01■■■□□ 2.71
HMGA2-206ENST00000536545 TET3O43151 1660 aa32.01■■■□□ 2.71
HMGA2-206ENST00000536545 HECW2Q9P2P5 1572 aa31.99■■■□□ 2.71
HMGA2-206ENST00000536545 MLH3Q9UHC1 1453 aa31.99■■■□□ 2.71
HMGA2-206ENST00000536545 CYB5RLQ6IPT4 315 aa31.99■■■□□ 2.71
HMGA2-206ENST00000536545 WASHC2AQ641Q2 1341 aa31.95■■■□□ 2.7
HMGA2-206ENST00000536545 YTHDC1Q96MU7 727 aaKnown RBP31.94■■■□□ 2.7
HMGA2-206ENST00000536545 TRPM2O94759 1503 aa31.94■■■□□ 2.7
HMGA2-206ENST00000536545 POLR1AO95602 1720 aaPredicted RBP31.94■■■□□ 2.7
HMGA2-206ENST00000536545 RNF17Q9BXT8 1623 aaKnown RBP31.93■■■□□ 2.7
HMGA2-206ENST00000536545 A2MP01023 1474 aa31.93■■■□□ 2.7
HMGA2-206ENST00000536545 FRMPD1Q5SYB0 1578 aa31.92■■■□□ 2.7
HMGA2-206ENST00000536545 KANK1Q14678 1352 aa31.91■■■□□ 2.7
HMGA2-206ENST00000536545 SPHKAPQ2M3C7 1700 aa31.91■■■□□ 2.7
HMGA2-206ENST00000536545 MYT1LQ9UL68 1186 aa31.9■■■□□ 2.7
HMGA2-206ENST00000536545 PTPRTO14522 1441 aa31.9■■■□□ 2.7
HMGA2-206ENST00000536545 ABCA6Q8N139 1617 aa31.89■■■□□ 2.7
HMGA2-206ENST00000536545 ZNF326Q5BKZ1 582 aaKnown RBP31.89■■■□□ 2.7
HMGA2-206ENST00000536545 KIF3BO15066 747 aa31.87■■■□□ 2.69
HMGA2-206ENST00000536545 BCORL1Q5H9F3 1711 aa31.87■■■□□ 2.69
HMGA2-206ENST00000536545 USP47Q96K76 1375 aa31.87■■■□□ 2.69
HMGA2-206ENST00000536545 DIP2BQ9P265 1576 aa31.87■■■□□ 2.69
HMGA2-206ENST00000536545 PRAG1Q86YV5 1406 aa31.87■■■□□ 2.69
HMGA2-206ENST00000536545 CCDC7Q96M83 1385 aa31.86■■■□□ 2.69
HMGA2-206ENST00000536545 DCAF11Q8TEB1 546 aa31.86■■■□□ 2.69
HMGA2-206ENST00000536545 RICTORQ6R327 1708 aa31.86■■■□□ 2.69
HMGA2-206ENST00000536545 TRPM1Q7Z4N2 1603 aa31.85■■■□□ 2.69
HMGA2-206ENST00000536545 LMTK2Q8IWU2 1503 aa31.84■■■□□ 2.69
HMGA2-206ENST00000536545 EFCAB6Q5THR3 1501 aa31.83■■■□□ 2.69
HMGA2-206ENST00000536545 CEP152O94986 1710 aa31.82■■■□□ 2.68
HMGA2-206ENST00000536545 CLTCL1P53675 1640 aa31.81■■■□□ 2.68
HMGA2-206ENST00000536545 C11orf95C9JLR9 678 aaPredicted RBP31.81■■■□□ 2.68
HMGA2-206ENST00000536545 KDM2AQ9Y2K7 1162 aa31.8■■■□□ 2.68
HMGA2-206ENST00000536545 CNTLNQ9NXG0 1405 aa31.79■■■□□ 2.68
HMGA2-206ENST00000536545 DIP2CQ9Y2E4 1556 aa31.78■■■□□ 2.68
HMGA2-206ENST00000536545 PPRC1Q5VV67 1664 aaKnown RBP31.78■■■□□ 2.68
HMGA2-206ENST00000536545 ANP32CO43423 234 aa31.77■■■□□ 2.68
HMGA2-206ENST00000536545 LAMC1P11047 1609 aa31.75■■■□□ 2.67
HMGA2-206ENST00000536545 KIF7Q2M1P5 1343 aa31.75■■■□□ 2.67
HMGA2-206ENST00000536545 RGL3Q3MIN7 710 aa31.73■■■□□ 2.67
HMGA2-206ENST00000536545 NEURL4Q96JN8 1562 aa31.73■■■□□ 2.67
HMGA2-206ENST00000536545 RAPGEF3O95398 923 aa31.73■■■□□ 2.67
HMGA2-206ENST00000536545 CARD11Q9BXL7 1154 aa31.72■■■□□ 2.67
HMGA2-206ENST00000536545 GPRASP1Q5JY77 1395 aa31.72■■■□□ 2.67
HMGA2-206ENST00000536545 CCER2I3L3R5 266 aa31.71■■■□□ 2.67
HMGA2-206ENST00000536545 ROCK2O75116 1388 aaKnown RBP31.71■■■□□ 2.67
HMGA2-206ENST00000536545 SCAF1Q9H7N4 1312 aaKnown RBP31.7■■■□□ 2.66
HMGA2-206ENST00000536545 ZMYM4Q5VZL5 1548 aa31.69■■■□□ 2.66
HMGA2-206ENST00000536545 MADDQ8WXG6 1647 aa31.67■■■□□ 2.66
HMGA2-206ENST00000536545 FAM69CQ0P6D2 419 aa31.66■■■□□ 2.66
HMGA2-206ENST00000536545 ABCC3O15438 1527 aa31.64■■■□□ 2.66
HMGA2-206ENST00000536545 ARID4BQ4LE39 1312 aaPredicted RBP31.63■■■□□ 2.65
HMGA2-206ENST00000536545 UGGT1Q9NYU2 1555 aa31.61■■■□□ 2.65
HMGA2-206ENST00000536545 YEATS2Q9ULM3 1422 aa31.61■■■□□ 2.65
HMGA2-206ENST00000536545 NPATQ14207 1427 aa31.58■■■□□ 2.65
HMGA2-206ENST00000536545 TSPOAP1O95153 1857 aa31.57■■■□□ 2.64
HMGA2-206ENST00000536545 CAMSAP1Q5T5Y3 1602 aa31.57■■■□□ 2.64
HMGA2-206ENST00000536545 KIF1BO60333 1816 aa31.55■■■□□ 2.64
HMGA2-206ENST00000536545 NBPF1Q3BBV0 1214 aa31.55■■■□□ 2.64
HMGA2-206ENST00000536545 ZC3H13Q5T200 1668 aaKnown RBP31.54■■■□□ 2.64
HMGA2-206ENST00000536545 ST20-MTHFSA0A0A6YYL1 179 aa31.53■■■□□ 2.64
HMGA2-206ENST00000536545 STAC3Q96MF2 364 aa31.53■■■□□ 2.64
HMGA2-206ENST00000536545 MROH2AA6NES4 1674 aa31.53■■■□□ 2.64
HMGA2-206ENST00000536545 KIF13AQ9H1H9 1805 aa31.53■■■□□ 2.64
HMGA2-206ENST00000536545 GGT6Q6P531 493 aa31.51■■■□□ 2.64
HMGA2-206ENST00000536545 ADGRB3O60242 1522 aa31.51■■■□□ 2.63
HMGA2-206ENST00000536545 IFT172Q9UG01 1749 aa31.51■■■□□ 2.63
HMGA2-206ENST00000536545 MYOM2P54296 1465 aa31.51■■■□□ 2.63
HMGA2-206ENST00000536545 KIAA1210Q9ULL0 1709 aa31.47■■■□□ 2.63
HMGA2-206ENST00000536545 IQGAP1P46940 1657 aa31.47■■■□□ 2.63
HMGA2-206ENST00000536545 REREQ9P2R6 1566 aa31.46■■■□□ 2.63
HMGA2-206ENST00000536545 SIGLEC1Q9BZZ2 1709 aa31.45■■■□□ 2.63
HMGA2-206ENST00000536545 WASHC2CQ9Y4E1 1318 aa31.45■■■□□ 2.63
HMGA2-206ENST00000536545 NOS1P29475 1434 aa31.44■■■□□ 2.62
HMGA2-206ENST00000536545 ARHGAP31Q2M1Z3 1444 aa31.43■■■□□ 2.62
HMGA2-206ENST00000536545 COL17A1Q9UMD9 1497 aaPredicted RBP31.43■■■□□ 2.62
HMGA2-206ENST00000536545 GTF3C3Q9Y5Q9 886 aa31.42■■■□□ 2.62
HMGA2-206ENST00000536545 PRKRIP1Q9H875 184 aaPredicted RBP31.41■■■□□ 2.62
HMGA2-206ENST00000536545 PIK3C2BO00750 1634 aa31.4■■■□□ 2.62
HMGA2-206ENST00000536545 NRXN1Q9ULB1 1477 aa31.4■■■□□ 2.62
HMGA2-206ENST00000536545 SYNMO15061 1565 aa31.39■■■□□ 2.62
HMGA2-206ENST00000536545 AGLP35573 1532 aa31.37■■■□□ 2.61
HMGA2-206ENST00000536545 TESK2Q96S53 571 aa31.36■■■□□ 2.61
HMGA2-206ENST00000536545 POLR3GLQ9BT43 218 aa31.35■■■□□ 2.61
HMGA2-206ENST00000536545 SCAF11Q99590 1463 aaKnown RBP31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms