RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 CC2D1BQ5T0F9 858 aaKnown RBP11.26□□□□□ -0.61
ABCA4-207ENST00000536513 ADGRL1O94910 1474 aa11.26□□□□□ -0.61
ABCA4-207ENST00000536513 KANK1Q14678 1352 aa11.26□□□□□ -0.61
ABCA4-207ENST00000536513 FKBP8Q14318 412 aa11.26□□□□□ -0.61
ABCA4-207ENST00000536513 CCDC144AA2RUR9 1427 aa11.25□□□□□ -0.61
ABCA4-207ENST00000536513 HNRNPUQ00839 825 aaKnown RBP eCLIP11.25□□□□□ -0.61
ABCA4-207ENST00000536513 ABCA8O94911 1581 aa11.25□□□□□ -0.61
ABCA4-207ENST00000536513 NUTM2FA1L443 756 aa11.25□□□□□ -0.61
ABCA4-207ENST00000536513 C11orf95C9JLR9 678 aaPredicted RBP11.25□□□□□ -0.61
ABCA4-207ENST00000536513 TRAK1Q9UPV9 953 aa11.25□□□□□ -0.61
ABCA4-207ENST00000536513 FBXO31Q5XUX0 539 aaPredicted RBP11.25□□□□□ -0.61
ABCA4-207ENST00000536513 ROCK2O75116 1388 aaKnown RBP11.25□□□□□ -0.61
ABCA4-207ENST00000536513 MRS2Q9HD23 443 aa11.24□□□□□ -0.61
ABCA4-207ENST00000536513 CCDC141Q6ZP82 1450 aa11.24□□□□□ -0.61
ABCA4-207ENST00000536513 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.24□□□□□ -0.61
ABCA4-207ENST00000536513 CFAP65Q6ZU64 1925 aaKnown RBP11.23□□□□□ -0.61
ABCA4-207ENST00000536513 CEBPAP49715 358 aaPredicted RBP11.23□□□□□ -0.61
ABCA4-207ENST00000536513 WDR7Q9Y4E6 1490 aa11.23□□□□□ -0.61
ABCA4-207ENST00000536513 PLCH2O75038 1416 aa11.22□□□□□ -0.61
ABCA4-207ENST00000536513 IRX6P78412 446 aaPredicted RBP11.22□□□□□ -0.61
ABCA4-207ENST00000536513 PLCB2Q00722 1185 aa11.22□□□□□ -0.61
ABCA4-207ENST00000536513 CFAP70Q5T0N1 1121 aa11.22□□□□□ -0.61
ABCA4-207ENST00000536513 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.22□□□□□ -0.61
ABCA4-207ENST00000536513 TTC37Q6PGP7 1564 aa11.21□□□□□ -0.61
ABCA4-207ENST00000536513 SUPT16HQ9Y5B9 1047 aaKnown RBP11.21□□□□□ -0.61
ABCA4-207ENST00000536513 ANKRD30BQ9BXX2 1392 aa11.21□□□□□ -0.61
ABCA4-207ENST00000536513 ABCC10Q5T3U5 1492 aa11.2□□□□□ -0.62
ABCA4-207ENST00000536513 WASHC2AQ641Q2 1341 aa11.2□□□□□ -0.62
ABCA4-207ENST00000536513 ROCK1Q13464 1354 aa11.19□□□□□ -0.62
ABCA4-207ENST00000536513 KIAA1107Q9UPP5 1409 aa11.18□□□□□ -0.62
ABCA4-207ENST00000536513 TCOF1Q13428 1488 aaKnown RBP11.18□□□□□ -0.62
ABCA4-207ENST00000536513 ARHGEF12Q9NZN5 1544 aa11.17□□□□□ -0.62
ABCA4-207ENST00000536513 USP47Q96K76 1375 aa11.17□□□□□ -0.62
ABCA4-207ENST00000536513 HAP1P54257 671 aaPredicted RBP11.17□□□□□ -0.62
ABCA4-207ENST00000536513 TSHZ2Q9NRE2 1034 aa11.17□□□□□ -0.62
ABCA4-207ENST00000536513 SOX12O15370 315 aa11.16□□□□□ -0.62
ABCA4-207ENST00000536513 ZCCHC11Q5TAX3 1644 aaKnown RBP11.16□□□□□ -0.62
ABCA4-207ENST00000536513 CCDC184Q52MB2 194 aa11.16□□□□□ -0.62
ABCA4-207ENST00000536513 POGKQ9P215 609 aa11.15□□□□□ -0.62
ABCA4-207ENST00000536513 MBD5Q9P267 1494 aa11.15□□□□□ -0.62
ABCA4-207ENST00000536513 TSPOAP1O95153 1857 aa11.14□□□□□ -0.63
ABCA4-207ENST00000536513 KIF7Q2M1P5 1343 aa11.14□□□□□ -0.63
ABCA4-207ENST00000536513 RTL5Q5HYW3 569 aaPredicted RBP11.14□□□□□ -0.63
ABCA4-207ENST00000536513 CLASP1Q7Z460 1538 aa11.14□□□□□ -0.63
ABCA4-207ENST00000536513 PPM1GO15355 546 aaPredicted RBP11.14□□□□□ -0.63
ABCA4-207ENST00000536513 KDM5BQ9UGL1 1544 aa11.14□□□□□ -0.63
ABCA4-207ENST00000536513 RBM33Q96EV2 1170 aaKnown RBP11.13□□□□□ -0.63
ABCA4-207ENST00000536513 SAMD9LQ8IVG5 1584 aa11.13□□□□□ -0.63
ABCA4-207ENST00000536513 SRPK2P78362 688 aaKnown RBP11.12□□□□□ -0.63
ABCA4-207ENST00000536513 DNMT1P26358 1616 aaKnown RBP11.12□□□□□ -0.63
ABCA4-207ENST00000536513 ADCY10Q96PN6 1610 aa11.12□□□□□ -0.63
ABCA4-207ENST00000536513 ADGRF5Q8IZF2 1346 aa11.12□□□□□ -0.63
ABCA4-207ENST00000536513 PZPP20742 1482 aa11.12□□□□□ -0.63
ABCA4-207ENST00000536513 IDI1Q13907 227 aa11.11□□□□□ -0.63
ABCA4-207ENST00000536513 CDC42BPAQ5VT25 1732 aa11.11□□□□□ -0.63
ABCA4-207ENST00000536513 ITSN2Q9NZM3 1697 aa11.11□□□□□ -0.63
ABCA4-207ENST00000536513 MINK1Q8N4C8 1332 aaPredicted RBP11.11□□□□□ -0.63
ABCA4-207ENST00000536513 NBR1Q14596 966 aa11.1□□□□□ -0.63
ABCA4-207ENST00000536513 NEUROD2Q15784 382 aa11.1□□□□□ -0.63
ABCA4-207ENST00000536513 PANK3Q9H999 370 aa11.1□□□□□ -0.63
ABCA4-207ENST00000536513 YEATS2Q9ULM3 1422 aa11.1□□□□□ -0.63
ABCA4-207ENST00000536513 TMF1P82094 1093 aa11.09□□□□□ -0.63
ABCA4-207ENST00000536513 C14orf37Q86TY3 774 aa11.09□□□□□ -0.63
ABCA4-207ENST00000536513 ZBTB7CA1YPR0 619 aa11.09□□□□□ -0.63
ABCA4-207ENST00000536513 DENND4BO75064 1496 aaPredicted RBP11.08□□□□□ -0.64
ABCA4-207ENST00000536513 KNSTRNQ9Y448 316 aa11.08□□□□□ -0.64
ABCA4-207ENST00000536513 SLC26A8Q96RN1 970 aa11.08□□□□□ -0.64
ABCA4-207ENST00000536513 DHX29Q7Z478 1369 aaKnown RBP11.08□□□□□ -0.64
ABCA4-207ENST00000536513 RPRD2Q5VT52 1461 aaKnown RBP11.06□□□□□ -0.64
ABCA4-207ENST00000536513 CABP2Q9NPB3 220 aa11.06□□□□□ -0.64
ABCA4-207ENST00000536513 CDC42BPBQ9Y5S2 1711 aa11.06□□□□□ -0.64
ABCA4-207ENST00000536513 FAM135AQ9P2D6 1515 aa11.05□□□□□ -0.64
ABCA4-207ENST00000536513 CCDC7Q96M83 1385 aa11.05□□□□□ -0.64
ABCA4-207ENST00000536513 ERBINQ96RT1 1412 aa11.05□□□□□ -0.64
ABCA4-207ENST00000536513 NPM2Q86SE8 214 aaKnown RBP11.05□□□□□ -0.64
ABCA4-207ENST00000536513 LMOD2Q6P5Q4 547 aa11.04□□□□□ -0.64
ABCA4-207ENST00000536513 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.04□□□□□ -0.64
ABCA4-207ENST00000536513 PRKRIP1Q9H875 184 aaPredicted RBP11.04□□□□□ -0.64
ABCA4-207ENST00000536513 MYO5CQ9NQX4 1742 aa11.04□□□□□ -0.64
ABCA4-207ENST00000536513 RBM19Q9Y4C8 960 aaKnown RBP11.04□□□□□ -0.64
ABCA4-207ENST00000536513 SHROOM2Q13796 1616 aa11.04□□□□□ -0.64
ABCA4-207ENST00000536513 WAPLQ7Z5K2 1190 aa11.03□□□□□ -0.64
ABCA4-207ENST00000536513 TXNDC2Q86VQ3 553 aa11.03□□□□□ -0.64
ABCA4-207ENST00000536513 UHRF1BP1LA0JNW5 1464 aa11.03□□□□□ -0.64
ABCA4-207ENST00000536513 A2MP01023 1474 aa11.03□□□□□ -0.64
ABCA4-207ENST00000536513 UGGT1Q9NYU2 1555 aa11.02□□□□□ -0.64
ABCA4-207ENST00000536513 SLC12A5Q9H2X9 1139 aa11.02□□□□□ -0.65
ABCA4-207ENST00000536513 ZNF518AQ6AHZ1 1483 aa11.02□□□□□ -0.65
ABCA4-207ENST00000536513 VGFO15240 615 aaPredicted RBP11.01□□□□□ -0.65
ABCA4-207ENST00000536513 PREX2Q70Z35 1606 aa11.01□□□□□ -0.65
ABCA4-207ENST00000536513 RIMBP3CA6NJZ7 1639 aa11□□□□□ -0.65
ABCA4-207ENST00000536513 RIMBP3BA6NNM3 1639 aa11□□□□□ -0.65
ABCA4-207ENST00000536513 ATP7AQ04656 1500 aa11□□□□□ -0.65
ABCA4-207ENST00000536513 CCDC146Q8IYE0 955 aa11□□□□□ -0.65
ABCA4-207ENST00000536513 RIMBP3Q9UFD9 1639 aa11□□□□□ -0.65
ABCA4-207ENST00000536513 PRAM1Q96QH2 718 aa10.99□□□□□ -0.65
ABCA4-207ENST00000536513 ADGRL2O95490 1459 aa10.99□□□□□ -0.65
ABCA4-207ENST00000536513 DUOX2Q9NRD8 1548 aa10.98□□□□□ -0.65
ABCA4-207ENST00000536513 NOS1P29475 1434 aa10.98□□□□□ -0.65
ABCA4-207ENST00000536513 WDR43Q15061 677 aaKnown RBP eCLIP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms