RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 UNC13BO14795 1591 aa18.18■□□□□ 0.5
SCARB1-204ENST00000535005 DEPDC5O75140 1603 aa18.18■□□□□ 0.5
SCARB1-204ENST00000535005 RNF17Q9BXT8 1623 aaKnown RBP18.18■□□□□ 0.5
SCARB1-204ENST00000535005 SIGLEC1Q9BZZ2 1709 aa18.17■□□□□ 0.5
SCARB1-204ENST00000535005 KDM5DQ9BY66 1539 aa18.16■□□□□ 0.5
SCARB1-204ENST00000535005 MROH1Q8NDA8 1641 aa18.15■□□□□ 0.5
SCARB1-204ENST00000535005 NUP155O75694 1391 aa18.15■□□□□ 0.5
SCARB1-204ENST00000535005 TRIM52Q96A61 297 aa18.14■□□□□ 0.5
SCARB1-204ENST00000535005 PPP6R1Q9UPN7 881 aa18.14■□□□□ 0.5
SCARB1-204ENST00000535005 PRDM15P57071 1507 aaPredicted RBP18.14■□□□□ 0.49
SCARB1-204ENST00000535005 VWDEQ8N2E2 1590 aa18.13■□□□□ 0.49
SCARB1-204ENST00000535005 KANK1Q14678 1352 aa18.13■□□□□ 0.49
SCARB1-204ENST00000535005 GGT6Q6P531 493 aa18.12■□□□□ 0.49
SCARB1-204ENST00000535005 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.12■□□□□ 0.49
SCARB1-204ENST00000535005 ARID4BQ4LE39 1312 aaPredicted RBP18.11■□□□□ 0.49
SCARB1-204ENST00000535005 IQGAP3Q86VI3 1631 aa18.11■□□□□ 0.49
SCARB1-204ENST00000535005 PZPP20742 1482 aa18.1■□□□□ 0.49
SCARB1-204ENST00000535005 FAM135AQ9P2D6 1515 aa18.1■□□□□ 0.49
SCARB1-204ENST00000535005 LMTK2Q8IWU2 1503 aa18.09■□□□□ 0.49
SCARB1-204ENST00000535005 MPHOSPH9Q99550 1183 aa18.09■□□□□ 0.49
SCARB1-204ENST00000535005 DHX57Q6P158 1386 aaKnown RBP18.07■□□□□ 0.48
SCARB1-204ENST00000535005 SLC4A1APQ9BWU0 796 aaKnown RBP18.07■□□□□ 0.48
SCARB1-204ENST00000535005 WASHC2CQ9Y4E1 1318 aa18.06■□□□□ 0.48
SCARB1-204ENST00000535005 ABCC3O15438 1527 aa18.05■□□□□ 0.48
SCARB1-204ENST00000535005 MLECQ14165 292 aa18.05■□□□□ 0.48
SCARB1-204ENST00000535005 ZC3H13Q5T200 1668 aaKnown RBP18.04■□□□□ 0.48
SCARB1-204ENST00000535005 TET3O43151 1660 aa18.03■□□□□ 0.48
SCARB1-204ENST00000535005 PKD2Q13563 968 aa18.02■□□□□ 0.47
SCARB1-204ENST00000535005 CNTLNQ9NXG0 1405 aa18.02■□□□□ 0.47
SCARB1-204ENST00000535005 ARHGAP31Q2M1Z3 1444 aa18.01■□□□□ 0.47
SCARB1-204ENST00000535005 EFCAB6Q5THR3 1501 aa18■□□□□ 0.47
SCARB1-204ENST00000535005 CEP152O94986 1710 aa18■□□□□ 0.47
SCARB1-204ENST00000535005 ESF1Q9H501 851 aaKnown RBP18■□□□□ 0.47
SCARB1-204ENST00000535005 ADAMTSL3P82987 1691 aa17.98■□□□□ 0.47
SCARB1-204ENST00000535005 RPRD2Q5VT52 1461 aaKnown RBP17.98■□□□□ 0.47
SCARB1-204ENST00000535005 CLSPNQ9HAW4 1339 aa17.98■□□□□ 0.47
SCARB1-204ENST00000535005 CAMSAP1Q5T5Y3 1602 aa17.97■□□□□ 0.47
SCARB1-204ENST00000535005 CLTCQ00610 1675 aaKnown RBP17.96■□□□□ 0.47
SCARB1-204ENST00000535005 CCER1Q8TC90 406 aaPredicted RBP17.96■□□□□ 0.47
SCARB1-204ENST00000535005 NPATQ14207 1427 aa17.96■□□□□ 0.47
SCARB1-204ENST00000535005 E9PCH4 1651 aa17.96■□□□□ 0.47
SCARB1-204ENST00000535005 MROH2AA6NES4 1674 aa17.95■□□□□ 0.46
SCARB1-204ENST00000535005 ZMYM3Q14202 1370 aa17.95■□□□□ 0.46
SCARB1-204ENST00000535005 ANKRD30BQ9BXX2 1392 aa17.94■□□□□ 0.46
SCARB1-204ENST00000535005 FOXD1Q16676 465 aa17.94■□□□□ 0.46
SCARB1-204ENST00000535005 FER1L4A9Z1Z3 1794 aa17.94■□□□□ 0.46
SCARB1-204ENST00000535005 PTPRTO14522 1441 aa17.93■□□□□ 0.46
SCARB1-204ENST00000535005 MYT1Q01538 1121 aa17.93■□□□□ 0.46
SCARB1-204ENST00000535005 MADDQ8WXG6 1647 aa17.92■□□□□ 0.46
SCARB1-204ENST00000535005 PLA2R1Q13018 1463 aa17.92■□□□□ 0.46
SCARB1-204ENST00000535005 SCAF1Q9H7N4 1312 aaKnown RBP17.91■□□□□ 0.46
SCARB1-204ENST00000535005 NOS1P29475 1434 aa17.91■□□□□ 0.46
SCARB1-204ENST00000535005 ERVK-7P63135 1459 aa17.88■□□□□ 0.45
SCARB1-204ENST00000535005 TRPM2O94759 1503 aa17.87■□□□□ 0.45
SCARB1-204ENST00000535005 RIMS1Q86UR5 1692 aaKnown RBP17.87■□□□□ 0.45
SCARB1-204ENST00000535005 SPHKAPQ2M3C7 1700 aa17.87■□□□□ 0.45
SCARB1-204ENST00000535005 SPATA31D1Q6ZQQ2 1576 aa17.87■□□□□ 0.45
SCARB1-204ENST00000535005 FBXO31Q5XUX0 539 aaPredicted RBP17.86■□□□□ 0.45
SCARB1-204ENST00000535005 C3P01024 1663 aa17.86■□□□□ 0.45
SCARB1-204ENST00000535005 PREX1Q8TCU6 1659 aa17.86■□□□□ 0.45
SCARB1-204ENST00000535005 KDM4FA0A1W2PPD8 638 aa17.84■□□□□ 0.45
SCARB1-204ENST00000535005 CEBPAP49715 358 aaPredicted RBP17.84■□□□□ 0.45
SCARB1-204ENST00000535005 SYNMO15061 1565 aa17.83■□□□□ 0.45
SCARB1-204ENST00000535005 SLC52A1Q9NWF4 448 aa17.83■□□□□ 0.44
SCARB1-204ENST00000535005 CCDC144AA2RUR9 1427 aa17.83■□□□□ 0.44
SCARB1-204ENST00000535005 PTPRMP28827 1452 aa17.83■□□□□ 0.44
SCARB1-204ENST00000535005 SIN3AQ96ST3 1273 aa17.82■□□□□ 0.44
SCARB1-204ENST00000535005 CFAP65Q6ZU64 1925 aaKnown RBP17.82■□□□□ 0.44
SCARB1-204ENST00000535005 TNRQ92752 1358 aa17.81■□□□□ 0.44
SCARB1-204ENST00000535005 PIK3C2BO00750 1634 aa17.8■□□□□ 0.44
SCARB1-204ENST00000535005 CLTCL1P53675 1640 aa17.79■□□□□ 0.44
SCARB1-204ENST00000535005 IDI1Q13907 227 aa17.78■□□□□ 0.44
SCARB1-204ENST00000535005 UGGT1Q9NYU2 1555 aa17.77■□□□□ 0.44
SCARB1-204ENST00000535005 NEUROD1Q13562 356 aa17.77■□□□□ 0.43
SCARB1-204ENST00000535005 TIMELESSQ9UNS1 1208 aa17.77■□□□□ 0.43
SCARB1-204ENST00000535005 NLRP1Q9C000 1473 aa17.76■□□□□ 0.43
SCARB1-204ENST00000535005 NEURL4Q96JN8 1562 aa17.76■□□□□ 0.43
SCARB1-204ENST00000535005 SPATA31E1Q6ZUB1 1445 aa17.75■□□□□ 0.43
SCARB1-204ENST00000535005 SETD1BQ9UPS6 1966 aaKnown RBP17.73■□□□□ 0.43
SCARB1-204ENST00000535005 PLPPR3Q6T4P5 718 aa17.73■□□□□ 0.43
SCARB1-204ENST00000535005 ADGRB3O60242 1522 aa17.71■□□□□ 0.43
SCARB1-204ENST00000535005 KIF1BO60333 1816 aa17.71■□□□□ 0.43
SCARB1-204ENST00000535005 TMEM131LA2VDJ0 1609 aa17.69■□□□□ 0.42
SCARB1-204ENST00000535005 KDM5AP29375 1690 aaKnown RBP17.69■□□□□ 0.42
SCARB1-204ENST00000535005 TONSLQ96HA7 1378 aa17.69■□□□□ 0.42
SCARB1-204ENST00000535005 A2ML1A8K2U0 1454 aa17.69■□□□□ 0.42
SCARB1-204ENST00000535005 MYO3AQ8NEV4 1616 aa17.68■□□□□ 0.42
SCARB1-204ENST00000535005 CHGAP10645 457 aaKnown RBP17.68■□□□□ 0.42
SCARB1-204ENST00000535005 L3MBTL2Q969R5 705 aa17.68■□□□□ 0.42
SCARB1-204ENST00000535005 RPGRIP1LQ68CZ1 1315 aa17.67■□□□□ 0.42
SCARB1-204ENST00000535005 RGL3Q3MIN7 710 aa17.66■□□□□ 0.42
SCARB1-204ENST00000535005 STAC3Q96MF2 364 aa17.66■□□□□ 0.42
SCARB1-204ENST00000535005 STAG3Q9UJ98 1225 aa17.66■□□□□ 0.42
SCARB1-204ENST00000535005 CENPBP07199 599 aaPredicted RBP17.65■□□□□ 0.42
SCARB1-204ENST00000535005 UHRF1BP1Q6BDS2 1440 aa17.65■□□□□ 0.42
SCARB1-204ENST00000535005 CEP170BQ9Y4F5 1589 aaPredicted RBP17.65■□□□□ 0.42
SCARB1-204ENST00000535005 ZNF142P52746 1687 aaPredicted RBP17.64■□□□□ 0.42
SCARB1-204ENST00000535005 UBR1Q8IWV7 1749 aa17.64■□□□□ 0.42
SCARB1-204ENST00000535005 THEMISQ8N1K5 641 aaPredicted RBP17.63■□□□□ 0.41
SCARB1-204ENST00000535005 ZNF326Q5BKZ1 582 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms