RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 MLH3Q9UHC1 1453 aa34.24■■■■□ 3.07
PTPMT1-205ENST00000534775 DEPDC5O75140 1603 aa34.2■■■■□ 3.07
PTPMT1-205ENST00000534775 DHX29Q7Z478 1369 aaKnown RBP34.2■■■■□ 3.06
PTPMT1-205ENST00000534775 TEX14Q8IWB6 1497 aa34.19■■■■□ 3.06
PTPMT1-205ENST00000534775 RICTORQ6R327 1708 aa34.18■■■■□ 3.06
PTPMT1-205ENST00000534775 PPRC1Q5VV67 1664 aaKnown RBP34.17■■■■□ 3.06
PTPMT1-205ENST00000534775 TSPOAP1O95153 1857 aa34.16■■■■□ 3.06
PTPMT1-205ENST00000534775 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.16■■■■□ 3.06
PTPMT1-205ENST00000534775 A2MP01023 1474 aa34.11■■■■□ 3.05
PTPMT1-205ENST00000534775 ABCA6Q8N139 1617 aa34.07■■■■□ 3.05
PTPMT1-205ENST00000534775 KANK1Q14678 1352 aa34.06■■■■□ 3.04
PTPMT1-205ENST00000534775 RAPGEF3O95398 923 aa34.06■■■■□ 3.04
PTPMT1-205ENST00000534775 PRDM15P57071 1507 aaPredicted RBP34.06■■■■□ 3.04
PTPMT1-205ENST00000534775 VWDEQ8N2E2 1590 aa34.04■■■■□ 3.04
PTPMT1-205ENST00000534775 KIF3BO15066 747 aa34.04■■■■□ 3.04
PTPMT1-205ENST00000534775 FRMPD1Q5SYB0 1578 aa34.03■■■■□ 3.04
PTPMT1-205ENST00000534775 BCORL1Q5H9F3 1711 aa34.03■■■■□ 3.04
PTPMT1-205ENST00000534775 L3MBTL2Q969R5 705 aa34.03■■■■□ 3.04
PTPMT1-205ENST00000534775 RNF17Q9BXT8 1623 aaKnown RBP34.02■■■■□ 3.04
PTPMT1-205ENST00000534775 TET3O43151 1660 aa34.01■■■■□ 3.04
PTPMT1-205ENST00000534775 ZMYM4Q5VZL5 1548 aa34.01■■■■□ 3.04
PTPMT1-205ENST00000534775 MROH1Q8NDA8 1641 aa34■■■■□ 3.03
PTPMT1-205ENST00000534775 DIP2CQ9Y2E4 1556 aa34■■■■□ 3.03
PTPMT1-205ENST00000534775 ATP10AO60312 1499 aa33.98■■■■□ 3.03
PTPMT1-205ENST00000534775 DIEXFQ68CQ4 756 aaKnown RBP33.97■■■■□ 3.03
PTPMT1-205ENST00000534775 E9PCH4 1651 aa33.95■■■■□ 3.03
PTPMT1-205ENST00000534775 CCDC144AA2RUR9 1427 aa33.95■■■■□ 3.03
PTPMT1-205ENST00000534775 PLA2R1Q13018 1463 aa33.91■■■■□ 3.02
PTPMT1-205ENST00000534775 LMTK2Q8IWU2 1503 aa33.88■■■■□ 3.01
PTPMT1-205ENST00000534775 SPHKAPQ2M3C7 1700 aa33.86■■■■□ 3.01
PTPMT1-205ENST00000534775 YEATS2Q9ULM3 1422 aa33.84■■■■□ 3.01
PTPMT1-205ENST00000534775 TRPM2O94759 1503 aa33.83■■■■□ 3.01
PTPMT1-205ENST00000534775 EFCAB6Q5THR3 1501 aa33.83■■■■□ 3.01
PTPMT1-205ENST00000534775 CEP152O94986 1710 aa33.82■■■■□ 3
PTPMT1-205ENST00000534775 PTPRTO14522 1441 aa33.81■■■■□ 3
PTPMT1-205ENST00000534775 REREQ9P2R6 1566 aa33.78■■■■□ 3
PTPMT1-205ENST00000534775 TRHP20396 242 aaPredicted RBP33.77■■■■□ 3
PTPMT1-205ENST00000534775 UHRF1BP1Q6BDS2 1440 aa33.75■■■□□ 2.99
PTPMT1-205ENST00000534775 NBPF8Q3BBV2 869 aa33.75■■■□□ 2.99
PTPMT1-205ENST00000534775 GGT6Q6P531 493 aa33.74■■■□□ 2.99
PTPMT1-205ENST00000534775 ZC3H13Q5T200 1668 aaKnown RBP33.73■■■□□ 2.99
PTPMT1-205ENST00000534775 COL17A1Q9UMD9 1497 aaPredicted RBP33.72■■■□□ 2.99
PTPMT1-205ENST00000534775 ABCC3O15438 1527 aa33.72■■■□□ 2.99
PTPMT1-205ENST00000534775 CLTCL1P53675 1640 aa33.67■■■□□ 2.98
PTPMT1-205ENST00000534775 ARHGEF40Q8TER5 1519 aa33.67■■■□□ 2.98
PTPMT1-205ENST00000534775 CAMSAP1Q5T5Y3 1602 aa33.67■■■□□ 2.98
PTPMT1-205ENST00000534775 WASHC2CQ9Y4E1 1318 aa33.67■■■□□ 2.98
PTPMT1-205ENST00000534775 AGLP35573 1532 aa33.67■■■□□ 2.98
PTPMT1-205ENST00000534775 DCAF11Q8TEB1 546 aa33.66■■■□□ 2.98
PTPMT1-205ENST00000534775 EIF4G2P78344 907 aaKnown RBP eCLIP33.64■■■□□ 2.98
PTPMT1-205ENST00000534775 NEURL4Q96JN8 1562 aa33.63■■■□□ 2.97
PTPMT1-205ENST00000534775 RALGAPBQ86X10 1494 aa33.63■■■□□ 2.97
PTPMT1-205ENST00000534775 SPATA31E1Q6ZUB1 1445 aa33.62■■■□□ 2.97
PTPMT1-205ENST00000534775 ZNF326Q5BKZ1 582 aaKnown RBP33.61■■■□□ 2.97
PTPMT1-205ENST00000534775 NPATQ14207 1427 aa33.6■■■□□ 2.97
PTPMT1-205ENST00000534775 RGL3Q3MIN7 710 aa33.59■■■□□ 2.97
PTPMT1-205ENST00000534775 KDM2AQ9Y2K7 1162 aa33.59■■■□□ 2.97
PTPMT1-205ENST00000534775 HSPA5P11021 654 aaKnown RBP33.57■■■□□ 2.97
PTPMT1-205ENST00000534775 KIF1BO60333 1816 aa33.56■■■□□ 2.96
PTPMT1-205ENST00000534775 HIRIP3Q9BW71 556 aaPredicted RBP33.56■■■□□ 2.96
PTPMT1-205ENST00000534775 ARHGAP31Q2M1Z3 1444 aa33.56■■■□□ 2.96
PTPMT1-205ENST00000534775 CNTLNQ9NXG0 1405 aa33.56■■■□□ 2.96
PTPMT1-205ENST00000534775 PRAG1Q86YV5 1406 aa33.55■■■□□ 2.96
PTPMT1-205ENST00000534775 PPP6R1Q9UPN7 881 aa33.53■■■□□ 2.96
PTPMT1-205ENST00000534775 STAC3Q96MF2 364 aa33.52■■■□□ 2.96
PTPMT1-205ENST00000534775 TRPM1Q7Z4N2 1603 aa33.51■■■□□ 2.96
PTPMT1-205ENST00000534775 UGGT1Q9NYU2 1555 aa33.48■■■□□ 2.95
PTPMT1-205ENST00000534775 NOS1P29475 1434 aa33.47■■■□□ 2.95
PTPMT1-205ENST00000534775 CFAP65Q6ZU64 1925 aaKnown RBP33.46■■■□□ 2.95
PTPMT1-205ENST00000534775 SIGLEC1Q9BZZ2 1709 aa33.46■■■□□ 2.95
PTPMT1-205ENST00000534775 USP47Q96K76 1375 aa33.42■■■□□ 2.94
PTPMT1-205ENST00000534775 LAMC1P11047 1609 aa33.42■■■□□ 2.94
PTPMT1-205ENST00000534775 ADGRB3O60242 1522 aa33.41■■■□□ 2.94
PTPMT1-205ENST00000534775 ROCK2O75116 1388 aaKnown RBP33.41■■■□□ 2.94
PTPMT1-205ENST00000534775 CARD11Q9BXL7 1154 aa33.41■■■□□ 2.94
PTPMT1-205ENST00000534775 MADDQ8WXG6 1647 aa33.4■■■□□ 2.94
PTPMT1-205ENST00000534775 PIK3C2BO00750 1634 aa33.4■■■□□ 2.94
PTPMT1-205ENST00000534775 MROH2AA6NES4 1674 aa33.39■■■□□ 2.94
PTPMT1-205ENST00000534775 POLR1AO95602 1720 aaPredicted RBP33.39■■■□□ 2.94
PTPMT1-205ENST00000534775 PREX1Q8TCU6 1659 aa33.39■■■□□ 2.94
PTPMT1-205ENST00000534775 SYNMO15061 1565 aa33.38■■■□□ 2.93
PTPMT1-205ENST00000534775 DDX10Q13206 875 aaKnown RBP33.37■■■□□ 2.93
PTPMT1-205ENST00000534775 IFT172Q9UG01 1749 aa33.37■■■□□ 2.93
PTPMT1-205ENST00000534775 CLTCQ00610 1675 aaKnown RBP33.37■■■□□ 2.93
PTPMT1-205ENST00000534775 MIER1Q8N108 512 aa33.36■■■□□ 2.93
PTPMT1-205ENST00000534775 GPRASP1Q5JY77 1395 aa33.36■■■□□ 2.93
PTPMT1-205ENST00000534775 MYOM2P54296 1465 aa33.35■■■□□ 2.93
PTPMT1-205ENST00000534775 KIAA1210Q9ULL0 1709 aa33.29■■■□□ 2.92
PTPMT1-205ENST00000534775 WASHC2AQ641Q2 1341 aa33.29■■■□□ 2.92
PTPMT1-205ENST00000534775 SLC52A1Q9NWF4 448 aa33.28■■■□□ 2.92
PTPMT1-205ENST00000534775 ERVK-7P63135 1459 aa33.26■■■□□ 2.91
PTPMT1-205ENST00000534775 CCDC7Q96M83 1385 aa33.26■■■□□ 2.91
PTPMT1-205ENST00000534775 PPLO60437 1756 aa33.25■■■□□ 2.91
PTPMT1-205ENST00000534775 CHGAP10645 457 aaKnown RBP33.25■■■□□ 2.91
PTPMT1-205ENST00000534775 MLECQ14165 292 aa33.25■■■□□ 2.91
PTPMT1-205ENST00000534775 RPGRIP1LQ68CZ1 1315 aa33.25■■■□□ 2.91
PTPMT1-205ENST00000534775 NBPF1Q3BBV0 1214 aa33.23■■■□□ 2.91
PTPMT1-205ENST00000534775 ESF1Q9H501 851 aaKnown RBP33.23■■■□□ 2.91
PTPMT1-205ENST00000534775 ARID4BQ4LE39 1312 aaPredicted RBP33.22■■■□□ 2.91
PTPMT1-205ENST00000534775 NRXN1Q9ULB1 1477 aa33.21■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 216.5 ms