RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 RGL3Q3MIN7 710 aa21.36■■□□□ 1.01
SRPRA-206ENST00000532259 DCAF11Q8TEB1 546 aa21.36■■□□□ 1.01
SRPRA-206ENST00000532259 CD109Q6YHK3 1445 aa21.34■■□□□ 1.01
SRPRA-206ENST00000532259 RTEL1-TNFRSF6BF6WH68 1400 aa21.34■■□□□ 1.01
SRPRA-206ENST00000532259 IQGAP3Q86VI3 1631 aa21.33■■□□□ 1.01
SRPRA-206ENST00000532259 ATP7AQ04656 1500 aa21.33■■□□□ 1
SRPRA-206ENST00000532259 ANP32CO43423 234 aa21.33■■□□□ 1
SRPRA-206ENST00000532259 CCDC144AA2RUR9 1427 aa21.32■■□□□ 1
SRPRA-206ENST00000532259 SPATA31E1Q6ZUB1 1445 aa21.32■■□□□ 1
SRPRA-206ENST00000532259 MAGI2Q86UL8 1455 aa21.32■■□□□ 1
SRPRA-206ENST00000532259 INO80Q9ULG1 1556 aaPredicted RBP21.3■■□□□ 1
SRPRA-206ENST00000532259 KIF3BO15066 747 aa21.3■■□□□ 1
SRPRA-206ENST00000532259 POLR3GLQ9BT43 218 aa21.28■■□□□ 1
SRPRA-206ENST00000532259 USP47Q96K76 1375 aa21.25■□□□□ 0.99
SRPRA-206ENST00000532259 CCDC7Q96M83 1385 aa21.25■□□□□ 0.99
SRPRA-206ENST00000532259 UHRF1BP1Q6BDS2 1440 aa21.25■□□□□ 0.99
SRPRA-206ENST00000532259 RAPGEF3O95398 923 aa21.24■□□□□ 0.99
SRPRA-206ENST00000532259 KIF7Q2M1P5 1343 aa21.24■□□□□ 0.99
SRPRA-206ENST00000532259 KIDINS220Q9ULH0 1771 aa21.23■□□□□ 0.99
SRPRA-206ENST00000532259 CARD11Q9BXL7 1154 aa21.23■□□□□ 0.99
SRPRA-206ENST00000532259 DHX29Q7Z478 1369 aaKnown RBP21.22■□□□□ 0.99
SRPRA-206ENST00000532259 CNGB1Q14028 1251 aaPredicted RBP21.21■□□□□ 0.99
SRPRA-206ENST00000532259 ZNF518AQ6AHZ1 1483 aa21.21■□□□□ 0.99
SRPRA-206ENST00000532259 E9PCH4 1651 aa21.21■□□□□ 0.99
SRPRA-206ENST00000532259 A2MP01023 1474 aa21.2■□□□□ 0.98
SRPRA-206ENST00000532259 RALGAPBQ86X10 1494 aa21.2■□□□□ 0.98
SRPRA-206ENST00000532259 NBPF1Q3BBV0 1214 aa21.19■□□□□ 0.98
SRPRA-206ENST00000532259 POGZQ7Z3K3 1410 aa21.18■□□□□ 0.98
SRPRA-206ENST00000532259 BCORL1Q5H9F3 1711 aa21.18■□□□□ 0.98
SRPRA-206ENST00000532259 KDM5CP41229 1560 aa21.18■□□□□ 0.98
SRPRA-206ENST00000532259 DEPDC5O75140 1603 aa21.18■□□□□ 0.98
SRPRA-206ENST00000532259 ATP10AO60312 1499 aa21.16■□□□□ 0.98
SRPRA-206ENST00000532259 PRAG1Q86YV5 1406 aa21.16■□□□□ 0.98
SRPRA-206ENST00000532259 ST20-MTHFSA0A0A6YYL1 179 aa21.15■□□□□ 0.98
SRPRA-206ENST00000532259 ROCK2O75116 1388 aaKnown RBP21.15■□□□□ 0.98
SRPRA-206ENST00000532259 CNTLNQ9NXG0 1405 aa21.15■□□□□ 0.98
SRPRA-206ENST00000532259 MROH1Q8NDA8 1641 aa21.15■□□□□ 0.98
SRPRA-206ENST00000532259 KANK1Q14678 1352 aa21.13■□□□□ 0.97
SRPRA-206ENST00000532259 CCER2I3L3R5 266 aa21.12■□□□□ 0.97
SRPRA-206ENST00000532259 GGT6Q6P531 493 aa21.12■□□□□ 0.97
SRPRA-206ENST00000532259 VWDEQ8N2E2 1590 aa21.11■□□□□ 0.97
SRPRA-206ENST00000532259 FAM69CQ0P6D2 419 aa21.11■□□□□ 0.97
SRPRA-206ENST00000532259 CFAP74Q9C0B2 1584 aa21.11■□□□□ 0.97
SRPRA-206ENST00000532259 FRMPD1Q5SYB0 1578 aa21.1■□□□□ 0.97
SRPRA-206ENST00000532259 PRDM15P57071 1507 aaPredicted RBP21.1■□□□□ 0.97
SRPRA-206ENST00000532259 CCDC184Q52MB2 194 aa21.09■□□□□ 0.97
SRPRA-206ENST00000532259 TET3O43151 1660 aa21.09■□□□□ 0.97
SRPRA-206ENST00000532259 MLH3Q9UHC1 1453 aa21.09■□□□□ 0.97
SRPRA-206ENST00000532259 UGGT1Q9NYU2 1555 aa21.08■□□□□ 0.97
SRPRA-206ENST00000532259 TRPM1Q7Z4N2 1603 aa21.08■□□□□ 0.97
SRPRA-206ENST00000532259 PTPRTO14522 1441 aa21.08■□□□□ 0.97
SRPRA-206ENST00000532259 EIF2AK4Q9P2K8 1649 aaKnown RBP21.08■□□□□ 0.96
SRPRA-206ENST00000532259 CLTCL1P53675 1640 aa21.07■□□□□ 0.96
SRPRA-206ENST00000532259 TRPM2O94759 1503 aa21.07■□□□□ 0.96
SRPRA-206ENST00000532259 HECW2Q9P2P5 1572 aa21.07■□□□□ 0.96
SRPRA-206ENST00000532259 NEO1Q92859 1461 aa21.07■□□□□ 0.96
SRPRA-206ENST00000532259 SPHKAPQ2M3C7 1700 aa21.07■□□□□ 0.96
SRPRA-206ENST00000532259 ABCA6Q8N139 1617 aa21.07■□□□□ 0.96
SRPRA-206ENST00000532259 POLR1AO95602 1720 aaPredicted RBP21.06■□□□□ 0.96
SRPRA-206ENST00000532259 MAP3K4Q9Y6R4 1608 aa21.06■□□□□ 0.96
SRPRA-206ENST00000532259 PRKRIP1Q9H875 184 aaPredicted RBP21.04■□□□□ 0.96
SRPRA-206ENST00000532259 CEP152O94986 1710 aa21.03■□□□□ 0.96
SRPRA-206ENST00000532259 CFAP65Q6ZU64 1925 aaKnown RBP21.03■□□□□ 0.96
SRPRA-206ENST00000532259 PPRC1Q5VV67 1664 aaKnown RBP21.03■□□□□ 0.96
SRPRA-206ENST00000532259 YEATS2Q9ULM3 1422 aa21.02■□□□□ 0.96
SRPRA-206ENST00000532259 EFCAB6Q5THR3 1501 aa21■□□□□ 0.95
SRPRA-206ENST00000532259 TSPOAP1O95153 1857 aa21■□□□□ 0.95
SRPRA-206ENST00000532259 GPRASP1Q5JY77 1395 aa20.99■□□□□ 0.95
SRPRA-206ENST00000532259 RICTORQ6R327 1708 aa20.98■□□□□ 0.95
SRPRA-206ENST00000532259 DIP2BQ9P265 1576 aa20.98■□□□□ 0.95
SRPRA-206ENST00000532259 WASHC2CQ9Y4E1 1318 aa20.98■□□□□ 0.95
SRPRA-206ENST00000532259 RNF17Q9BXT8 1623 aaKnown RBP20.98■□□□□ 0.95
SRPRA-206ENST00000532259 DIP2CQ9Y2E4 1556 aa20.97■□□□□ 0.95
SRPRA-206ENST00000532259 GLI2P10070 1586 aa20.97■□□□□ 0.95
SRPRA-206ENST00000532259 NPATQ14207 1427 aa20.96■□□□□ 0.95
SRPRA-206ENST00000532259 CHGAP10645 457 aaKnown RBP20.95■□□□□ 0.94
SRPRA-206ENST00000532259 MADDQ8WXG6 1647 aa20.94■□□□□ 0.94
SRPRA-206ENST00000532259 TESK2Q96S53 571 aa20.94■□□□□ 0.94
SRPRA-206ENST00000532259 FAM9BQ8IZU0 186 aa20.94■□□□□ 0.94
SRPRA-206ENST00000532259 MRS2Q9HD23 443 aa20.93■□□□□ 0.94
SRPRA-206ENST00000532259 LMTK2Q8IWU2 1503 aa20.93■□□□□ 0.94
SRPRA-206ENST00000532259 HNRNPUQ00839 825 aaKnown RBP eCLIP20.93■□□□□ 0.94
SRPRA-206ENST00000532259 ARID4BQ4LE39 1312 aaPredicted RBP20.92■□□□□ 0.94
SRPRA-206ENST00000532259 ADGRF5Q8IZF2 1346 aa20.92■□□□□ 0.94
SRPRA-206ENST00000532259 DISP3Q9P2K9 1392 aa20.92■□□□□ 0.94
SRPRA-206ENST00000532259 KIF13AQ9H1H9 1805 aa20.91■□□□□ 0.94
SRPRA-206ENST00000532259 ABCC3O15438 1527 aa20.91■□□□□ 0.94
SRPRA-206ENST00000532259 MROH2AA6NES4 1674 aa20.89■□□□□ 0.94
SRPRA-206ENST00000532259 CFAP70Q5T0N1 1121 aa20.89■□□□□ 0.93
SRPRA-206ENST00000532259 LAMC1P11047 1609 aa20.86■□□□□ 0.93
SRPRA-206ENST00000532259 KIF1BO60333 1816 aa20.86■□□□□ 0.93
SRPRA-206ENST00000532259 NUTM2DQ5VT03 806 aaPredicted RBP20.85■□□□□ 0.93
SRPRA-206ENST00000532259 SIGLEC1Q9BZZ2 1709 aa20.85■□□□□ 0.93
SRPRA-206ENST00000532259 SENP3-EIF4A1A0A087X0R7 540 aa20.84■□□□□ 0.93
SRPRA-206ENST00000532259 SENP3Q9H4L4 574 aaPredicted RBP20.83■□□□□ 0.93
SRPRA-206ENST00000532259 CAMSAP1Q5T5Y3 1602 aa20.83■□□□□ 0.92
SRPRA-206ENST00000532259 COL17A1Q9UMD9 1497 aaPredicted RBP20.83■□□□□ 0.92
SRPRA-206ENST00000532259 NOS1P29475 1434 aa20.82■□□□□ 0.92
SRPRA-206ENST00000532259 TMF1P82094 1093 aa20.8■□□□□ 0.92
SRPRA-206ENST00000532259 ADGRB3O60242 1522 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms