RNA–Protein interactions for RNA: ENST00000531126.5

SNHG12-212, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 1 (best) BASIC

Gene SNHG12, Length 719 nt, Biotype antisense RNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-212ENST00000531126 KANK1Q14678 1352 aa34.23■■■■□ 3.07
SNHG12-212ENST00000531126 FAM135AQ9P2D6 1515 aa34.2■■■■□ 3.07
SNHG12-212ENST00000531126 RAB3GAP2Q9H2M9 1393 aa34.19■■■■□ 3.06
SNHG12-212ENST00000531126 DEPDC5O75140 1603 aa34.19■■■■□ 3.06
SNHG12-212ENST00000531126 GGT6Q6P531 493 aa34.18■■■■□ 3.06
SNHG12-212ENST00000531126 SIGLEC1Q9BZZ2 1709 aa34.17■■■■□ 3.06
SNHG12-212ENST00000531126 ESF1Q9H501 851 aaKnown RBP34.17■■■■□ 3.06
SNHG12-212ENST00000531126 UNC13BO14795 1591 aa34.16■■■■□ 3.06
SNHG12-212ENST00000531126 PRDM15P57071 1507 aaPredicted RBP34.15■■■■□ 3.06
SNHG12-212ENST00000531126 MLECQ14165 292 aa34.12■■■■□ 3.05
SNHG12-212ENST00000531126 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.11■■■■□ 3.055e-7■■■□□ 16.9
SNHG12-212ENST00000531126 TRIM52Q96A61 297 aa34.1■■■■□ 3.05
SNHG12-212ENST00000531126 ZC3H13Q5T200 1668 aaKnown RBP34.09■■■■□ 3.05
SNHG12-212ENST00000531126 CNTLNQ9NXG0 1405 aa34.09■■■■□ 3.05
SNHG12-212ENST00000531126 NUP155O75694 1391 aa34.09■■■■□ 3.05
SNHG12-212ENST00000531126 KDM5DQ9BY66 1539 aa34.08■■■■□ 3.05
SNHG12-212ENST00000531126 WASHC2CQ9Y4E1 1318 aa34.07■■■■□ 3.05
SNHG12-212ENST00000531126 MROH1Q8NDA8 1641 aa34.07■■■■□ 3.04
SNHG12-212ENST00000531126 IQGAP3Q86VI3 1631 aa34.03■■■■□ 3.04
SNHG12-212ENST00000531126 VWDEQ8N2E2 1590 aa34.02■■■■□ 3.04
SNHG12-212ENST00000531126 FER1L4A9Z1Z3 1794 aa34■■■■□ 3.03
SNHG12-212ENST00000531126 LMTK2Q8IWU2 1503 aa33.99■■■■□ 3.03
SNHG12-212ENST00000531126 ADAMTSL3P82987 1691 aa33.99■■■■□ 3.03
SNHG12-212ENST00000531126 ABCC3O15438 1527 aa33.99■■■■□ 3.03
SNHG12-212ENST00000531126 MROH2AA6NES4 1674 aa33.95■■■■□ 3.03
SNHG12-212ENST00000531126 TET3O43151 1660 aa33.94■■■■□ 3.02
SNHG12-212ENST00000531126 CLTCQ00610 1675 aaKnown RBP33.93■■■■□ 3.02
SNHG12-212ENST00000531126 CEP152O94986 1710 aa33.93■■■■□ 3.02
SNHG12-212ENST00000531126 SLC4A1APQ9BWU0 796 aaKnown RBP33.93■■■■□ 3.02
SNHG12-212ENST00000531126 MADDQ8WXG6 1647 aa33.92■■■■□ 3.02
SNHG12-212ENST00000531126 CAMSAP1Q5T5Y3 1602 aa33.9■■■■□ 3.02
SNHG12-212ENST00000531126 ARHGAP31Q2M1Z3 1444 aa33.88■■■■□ 3.01
SNHG12-212ENST00000531126 EFCAB6Q5THR3 1501 aa33.88■■■■□ 3.01
SNHG12-212ENST00000531126 PZPP20742 1482 aa33.88■■■■□ 3.01
SNHG12-212ENST00000531126 RPRD2Q5VT52 1461 aaKnown RBP33.88■■■■□ 3.01
SNHG12-212ENST00000531126 MPHOSPH9Q99550 1183 aa33.87■■■■□ 3.01
SNHG12-212ENST00000531126 RIMS1Q86UR5 1692 aaKnown RBP33.86■■■■□ 3.01
SNHG12-212ENST00000531126 ZMYM3Q14202 1370 aa33.85■■■■□ 3.01
SNHG12-212ENST00000531126 PKD2Q13563 968 aa33.79■■■■□ 3
SNHG12-212ENST00000531126 NPATQ14207 1427 aa33.77■■■■□ 3
SNHG12-212ENST00000531126 E9PCH4 1651 aa33.75■■■□□ 2.99
SNHG12-212ENST00000531126 PTPRMP28827 1452 aa33.75■■■□□ 2.99
SNHG12-212ENST00000531126 C3P01024 1663 aa33.74■■■□□ 2.99
SNHG12-212ENST00000531126 KDM4FA0A1W2PPD8 638 aa33.73■■■□□ 2.99
SNHG12-212ENST00000531126 DHX57Q6P158 1386 aaKnown RBP33.68■■■□□ 2.98
SNHG12-212ENST00000531126 ERVK-7P63135 1459 aa33.68■■■□□ 2.98
SNHG12-212ENST00000531126 PREX1Q8TCU6 1659 aa33.67■■■□□ 2.98
SNHG12-212ENST00000531126 SPATA31D1Q6ZQQ2 1576 aa33.66■■■□□ 2.98
SNHG12-212ENST00000531126 SPHKAPQ2M3C7 1700 aa33.64■■■□□ 2.98
SNHG12-212ENST00000531126 NOS1P29475 1434 aa33.63■■■□□ 2.97
SNHG12-212ENST00000531126 PTPRTO14522 1441 aa33.62■■■□□ 2.97
SNHG12-212ENST00000531126 CEBPAP49715 358 aaPredicted RBP33.62■■■□□ 2.97
SNHG12-212ENST00000531126 TNRQ92752 1358 aa33.61■■■□□ 2.97
SNHG12-212ENST00000531126 CFAP65Q6ZU64 1925 aaKnown RBP33.61■■■□□ 2.97
SNHG12-212ENST00000531126 PLPPR3Q6T4P5 718 aa33.6■■■□□ 2.97
SNHG12-212ENST00000531126 TRPM2O94759 1503 aa33.59■■■□□ 2.97
SNHG12-212ENST00000531126 FBXO31Q5XUX0 539 aaPredicted RBP33.59■■■□□ 2.97
SNHG12-212ENST00000531126 SLC52A1Q9NWF4 448 aa33.59■■■□□ 2.97
SNHG12-212ENST00000531126 SETD1BQ9UPS6 1966 aaKnown RBP33.58■■■□□ 2.97
SNHG12-212ENST00000531126 CLSPNQ9HAW4 1339 aa33.57■■■□□ 2.97
SNHG12-212ENST00000531126 FOXD1Q16676 465 aa33.56■■■□□ 2.96
SNHG12-212ENST00000531126 NLRP1Q9C000 1473 aa33.55■■■□□ 2.96
SNHG12-212ENST00000531126 CCDC144AA2RUR9 1427 aa33.54■■■□□ 2.96
SNHG12-212ENST00000531126 ANKRD30BQ9BXX2 1392 aa33.54■■■□□ 2.96
SNHG12-212ENST00000531126 CCER1Q8TC90 406 aaPredicted RBP33.53■■■□□ 2.96
SNHG12-212ENST00000531126 SYNMO15061 1565 aa33.51■■■□□ 2.95
SNHG12-212ENST00000531126 PLA2R1Q13018 1463 aa33.48■■■□□ 2.95
SNHG12-212ENST00000531126 PIK3C2BO00750 1634 aa33.46■■■□□ 2.95
SNHG12-212ENST00000531126 UHRF1BP1Q6BDS2 1440 aa33.46■■■□□ 2.95
SNHG12-212ENST00000531126 MYO3AQ8NEV4 1616 aa33.45■■■□□ 2.95
SNHG12-212ENST00000531126 STAG3Q9UJ98 1225 aa33.43■■■□□ 2.94
SNHG12-212ENST00000531126 IDI1Q13907 227 aa33.41■■■□□ 2.94
SNHG12-212ENST00000531126 A2ML1A8K2U0 1454 aa33.41■■■□□ 2.94
SNHG12-212ENST00000531126 CLTCL1P53675 1640 aa33.41■■■□□ 2.94
SNHG12-212ENST00000531126 KDM5AP29375 1690 aaKnown RBP33.41■■■□□ 2.94
SNHG12-212ENST00000531126 KIF1BO60333 1816 aa33.39■■■□□ 2.94
SNHG12-212ENST00000531126 ZNF142P52746 1687 aaPredicted RBP33.38■■■□□ 2.93
SNHG12-212ENST00000531126 UGGT1Q9NYU2 1555 aa33.37■■■□□ 2.93
SNHG12-212ENST00000531126 CEP170BQ9Y4F5 1589 aaPredicted RBP33.37■■■□□ 2.93
SNHG12-212ENST00000531126 ADGRB3O60242 1522 aa33.36■■■□□ 2.93
SNHG12-212ENST00000531126 NEURL4Q96JN8 1562 aa33.35■■■□□ 2.93
SNHG12-212ENST00000531126 CHGAP10645 457 aaKnown RBP33.34■■■□□ 2.93
SNHG12-212ENST00000531126 THEMISQ8N1K5 641 aaPredicted RBP33.33■■■□□ 2.93
SNHG12-212ENST00000531126 AEBP2Q6ZN18 517 aaPredicted RBP33.31■■■□□ 2.92
SNHG12-212ENST00000531126 TMEM131LA2VDJ0 1609 aa33.28■■■□□ 2.92
SNHG12-212ENST00000531126 UBR1Q8IWV7 1749 aa33.28■■■□□ 2.92
SNHG12-212ENST00000531126 HDGFP51858 240 aaKnown RBP33.28■■■□□ 2.92
SNHG12-212ENST00000531126 NEUROD1Q13562 356 aa33.25■■■□□ 2.91
SNHG12-212ENST00000531126 ZNF326Q5BKZ1 582 aaKnown RBP33.25■■■□□ 2.91
SNHG12-212ENST00000531126 RPGRIP1LQ68CZ1 1315 aa33.25■■■□□ 2.91
SNHG12-212ENST00000531126 SPATA31E1Q6ZUB1 1445 aa33.24■■■□□ 2.91
SNHG12-212ENST00000531126 SIN3AQ96ST3 1273 aa33.23■■■□□ 2.91
SNHG12-212ENST00000531126 STAC3Q96MF2 364 aa33.21■■■□□ 2.91
SNHG12-212ENST00000531126 TIMELESSQ9UNS1 1208 aa33.2■■■□□ 2.91
SNHG12-212ENST00000531126 TONSLQ96HA7 1378 aa33.2■■■□□ 2.9
SNHG12-212ENST00000531126 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.19■■■□□ 2.92e-10■■■■□ 20.6
SNHG12-212ENST00000531126 LMTK3Q96Q04 1460 aa33.18■■■□□ 2.9
SNHG12-212ENST00000531126 TMEM2Q9UHN6 1383 aa33.18■■■□□ 2.9
SNHG12-212ENST00000531126 RGL3Q3MIN7 710 aa33.17■■■□□ 2.9
SNHG12-212ENST00000531126 EID1Q9Y6B2 187 aa33.17■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms