RNA–Protein interactions for RNA: ENST00000530342.2

KDM2A-212, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-212ENST00000530342 TSPY10P0CW01 314 aa13.91□□□□□ -0.18
KDM2A-212ENST00000530342 HNRNPUQ00839 825 aaKnown RBP eCLIP13.91□□□□□ -0.18
KDM2A-212ENST00000530342 AFAP1Q8N556 730 aa13.91□□□□□ -0.18
KDM2A-212ENST00000530342 RNF17Q9BXT8 1623 aaKnown RBP13.9□□□□□ -0.18
KDM2A-212ENST00000530342 ANO8Q9HCE9 1232 aaPredicted RBP13.89□□□□□ -0.19
KDM2A-212ENST00000530342 FOXD1Q16676 465 aa13.89□□□□□ -0.19
KDM2A-212ENST00000530342 ARHGEF5Q12774 1597 aa13.89□□□□□ -0.19
KDM2A-212ENST00000530342 ARHGAP5Q13017 1502 aa13.89□□□□□ -0.19
KDM2A-212ENST00000530342 UNC13BO14795 1591 aa13.89□□□□□ -0.19
KDM2A-212ENST00000530342 PLPPR3Q6T4P5 718 aa13.88□□□□□ -0.19
KDM2A-212ENST00000530342 EIF4G2P78344 907 aaKnown RBP eCLIP13.88□□□□□ -0.19
KDM2A-212ENST00000530342 LRPPRCP42704 1394 aaKnown RBP13.88□□□□□ -0.19
KDM2A-212ENST00000530342 IRX6P78412 446 aaPredicted RBP13.87□□□□□ -0.19
KDM2A-212ENST00000530342 KIAA1107Q9UPP5 1409 aa13.87□□□□□ -0.19
KDM2A-212ENST00000530342 PREX2Q70Z35 1606 aa13.86□□□□□ -0.19
KDM2A-212ENST00000530342 NEFLP07196 543 aa13.86□□□□□ -0.19
KDM2A-212ENST00000530342 PPP4R2Q9NY27 417 aa13.85□□□□□ -0.19
KDM2A-212ENST00000530342 TSPOAP1O95153 1857 aa13.85□□□□□ -0.19
KDM2A-212ENST00000530342 SAMD9LQ8IVG5 1584 aa13.84□□□□□ -0.19
KDM2A-212ENST00000530342 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.84□□□□□ -0.194e-7■■■■□ 25.2
KDM2A-212ENST00000530342 MLECQ14165 292 aa13.83□□□□□ -0.2
KDM2A-212ENST00000530342 MAST1Q9Y2H9 1570 aa13.83□□□□□ -0.2
KDM2A-212ENST00000530342 ARID4BQ4LE39 1312 aaPredicted RBP13.82□□□□□ -0.2
KDM2A-212ENST00000530342 PRDM15P57071 1507 aaPredicted RBP13.82□□□□□ -0.2
KDM2A-212ENST00000530342 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.81□□□□□ -0.2
KDM2A-212ENST00000530342 VIRMAQ69YN4 1812 aaKnown RBP13.81□□□□□ -0.2
KDM2A-212ENST00000530342 SCAPERQ9BY12 1400 aa13.81□□□□□ -0.2
KDM2A-212ENST00000530342 FANCAO15360 1455 aa13.81□□□□□ -0.2
KDM2A-212ENST00000530342 SPAG9O60271 1321 aaKnown RBP13.8□□□□□ -0.2
KDM2A-212ENST00000530342 MYOM1P52179 1685 aa13.8□□□□□ -0.2
KDM2A-212ENST00000530342 IQGAP3Q86VI3 1631 aa13.8□□□□□ -0.2
KDM2A-212ENST00000530342 TTC37Q6PGP7 1564 aa13.8□□□□□ -0.2
KDM2A-212ENST00000530342 ZMYM4Q5VZL5 1548 aa13.8□□□□□ -0.2
KDM2A-212ENST00000530342 PLCH2O75038 1416 aa13.79□□□□□ -0.2
KDM2A-212ENST00000530342 USP47Q96K76 1375 aa13.79□□□□□ -0.2
KDM2A-212ENST00000530342 IQGAP1P46940 1657 aa13.79□□□□□ -0.2
KDM2A-212ENST00000530342 PLXNC1O60486 1568 aa13.77□□□□□ -0.21
KDM2A-212ENST00000530342 ADGRL1O94910 1474 aa13.77□□□□□ -0.21
KDM2A-212ENST00000530342 MAGI2Q86UL8 1455 aa13.77□□□□□ -0.21
KDM2A-212ENST00000530342 GGT6Q6P531 493 aa13.75□□□□□ -0.21
KDM2A-212ENST00000530342 FAM135AQ9P2D6 1515 aa13.74□□□□□ -0.21
KDM2A-212ENST00000530342 B4GALNT3Q6L9W6 998 aa13.74□□□□□ -0.21
KDM2A-212ENST00000530342 PNISRQ8TF01 805 aaKnown RBP13.73□□□□□ -0.21
KDM2A-212ENST00000530342 PLA2R1Q13018 1463 aa13.73□□□□□ -0.21
KDM2A-212ENST00000530342 MRS2Q9HD23 443 aa13.72□□□□□ -0.21
KDM2A-212ENST00000530342 TRAPPC8Q9Y2L5 1435 aa13.72□□□□□ -0.21
KDM2A-212ENST00000530342 SPHKAPQ2M3C7 1700 aa13.71□□□□□ -0.21
KDM2A-212ENST00000530342 CEP152O94986 1710 aa13.71□□□□□ -0.21
KDM2A-212ENST00000530342 KIF3BO15066 747 aa13.71□□□□□ -0.21
KDM2A-212ENST00000530342 DIP2BQ9P265 1576 aa13.71□□□□□ -0.21
KDM2A-212ENST00000530342 SYCP2Q9BX26 1530 aa13.71□□□□□ -0.21
KDM2A-212ENST00000530342 BLMP54132 1417 aaPredicted RBP13.71□□□□□ -0.22
KDM2A-212ENST00000530342 ANKRD50Q9ULJ7 1429 aa13.71□□□□□ -0.22
KDM2A-212ENST00000530342 PARD3Q8TEW0 1356 aa13.7□□□□□ -0.22
KDM2A-212ENST00000530342 NUDCQ9Y266 331 aa13.7□□□□□ -0.22
KDM2A-212ENST00000530342 COL17A1Q9UMD9 1497 aaPredicted RBP13.7□□□□□ -0.22
KDM2A-212ENST00000530342 PAK3O75914 559 aaPredicted RBP13.7□□□□□ -0.22
KDM2A-212ENST00000530342 C9orf84Q5VXU9 1444 aa13.7□□□□□ -0.22
KDM2A-212ENST00000530342 MADDQ8WXG6 1647 aa13.7□□□□□ -0.22
KDM2A-212ENST00000530342 FAM9BQ8IZU0 186 aa13.69□□□□□ -0.22
KDM2A-212ENST00000530342 PRAG1Q86YV5 1406 aa13.69□□□□□ -0.22
KDM2A-212ENST00000530342 GPRASP1Q5JY77 1395 aa13.69□□□□□ -0.22
KDM2A-212ENST00000530342 ESF1Q9H501 851 aaKnown RBP13.69□□□□□ -0.22
KDM2A-212ENST00000530342 EIF2AK4Q9P2K8 1649 aaKnown RBP13.68□□□□□ -0.22
KDM2A-212ENST00000530342 RSPH4AQ5TD94 716 aa13.68□□□□□ -0.22
KDM2A-212ENST00000530342 INSRP06213 1382 aa13.68□□□□□ -0.22
KDM2A-212ENST00000530342 CCDC136Q96JN2 1154 aa13.67□□□□□ -0.22
KDM2A-212ENST00000530342 ROCK2O75116 1388 aaKnown RBP13.67□□□□□ -0.22
KDM2A-212ENST00000530342 KTN1Q86UP2 1357 aaKnown RBP13.67□□□□□ -0.22
KDM2A-212ENST00000530342 ANKRD30AQ9BXX3 1397 aa13.67□□□□□ -0.22
KDM2A-212ENST00000530342 A2MP01023 1474 aa13.67□□□□□ -0.22
KDM2A-212ENST00000530342 IFT172Q9UG01 1749 aa13.67□□□□□ -0.22
KDM2A-212ENST00000530342 DEPDC5O75140 1603 aa13.66□□□□□ -0.22
KDM2A-212ENST00000530342 ATP10AO60312 1499 aa13.66□□□□□ -0.22
KDM2A-212ENST00000530342 SLC4A1APQ9BWU0 796 aaKnown RBP13.66□□□□□ -0.22
KDM2A-212ENST00000530342 BRD4O60885 1362 aaPredicted RBP13.66□□□□□ -0.22
KDM2A-212ENST00000530342 ABCA9Q8IUA7 1624 aa13.65□□□□□ -0.22
KDM2A-212ENST00000530342 KIF15Q9NS87 1388 aa13.65□□□□□ -0.22
KDM2A-212ENST00000530342 CCDC141Q6ZP82 1450 aa13.64□□□□□ -0.23
KDM2A-212ENST00000530342 PLEKHH2Q8IVE3 1493 aa13.63□□□□□ -0.23
KDM2A-212ENST00000530342 SENP3Q9H4L4 574 aaPredicted RBP13.62□□□□□ -0.23
KDM2A-212ENST00000530342 KIAA1210Q9ULL0 1709 aa13.62□□□□□ -0.23
KDM2A-212ENST00000530342 PODXL2Q9NZ53 605 aa13.61□□□□□ -0.23
KDM2A-212ENST00000530342 PER1O15534 1290 aaPredicted RBP13.61□□□□□ -0.23
KDM2A-212ENST00000530342 ZC3H13Q5T200 1668 aaKnown RBP13.6□□□□□ -0.23
KDM2A-212ENST00000530342 YEATS2Q9ULM3 1422 aa13.6□□□□□ -0.23
KDM2A-212ENST00000530342 NEO1Q92859 1461 aa13.6□□□□□ -0.23
KDM2A-212ENST00000530342 SYNMO15061 1565 aa13.6□□□□□ -0.23
KDM2A-212ENST00000530342 PKD2Q13563 968 aa13.59□□□□□ -0.23
KDM2A-212ENST00000530342 KIF13AQ9H1H9 1805 aa13.59□□□□□ -0.23
KDM2A-212ENST00000530342 NOP58Q9Y2X3 529 aaKnown RBP13.59□□□□□ -0.23
KDM2A-212ENST00000530342 ZNF518AQ6AHZ1 1483 aa13.59□□□□□ -0.23
KDM2A-212ENST00000530342 NUP155O75694 1391 aa13.58□□□□□ -0.24
KDM2A-212ENST00000530342 POGZQ7Z3K3 1410 aa13.57□□□□□ -0.24
KDM2A-212ENST00000530342 SHPRHQ149N8 1683 aa13.57□□□□□ -0.24
KDM2A-212ENST00000530342 GLI2P10070 1586 aa13.57□□□□□ -0.24
KDM2A-212ENST00000530342 NEURL4Q96JN8 1562 aa13.57□□□□□ -0.24
KDM2A-212ENST00000530342 MYBBP1AQ9BQG0 1328 aaKnown RBP13.57□□□□□ -0.24
KDM2A-212ENST00000530342 CHGAP10645 457 aaKnown RBP13.57□□□□□ -0.24
KDM2A-212ENST00000530342 WASHC2CQ9Y4E1 1318 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms