RNA–Protein interactions for RNA: ENST00000529800.5

CPNE7-205, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-205ENST00000529800 CDK12Q9NYV4 1490 aaPredicted RBP16.56■□□□□ 0.24
CPNE7-205ENST00000529800 SYNMO15061 1565 aa16.55■□□□□ 0.24
CPNE7-205ENST00000529800 FAM135BQ49AJ0 1406 aa16.55■□□□□ 0.24
CPNE7-205ENST00000529800 YY1P25490 414 aa16.53■□□□□ 0.24
CPNE7-205ENST00000529800 DNMT1P26358 1616 aaKnown RBP16.52■□□□□ 0.24
CPNE7-205ENST00000529800 NUTM2BA6NNL0 878 aaPredicted RBP16.52■□□□□ 0.24
CPNE7-205ENST00000529800 NUTM2EB1AL46 878 aaPredicted RBP16.52■□□□□ 0.24
CPNE7-205ENST00000529800 NUTM2DQ5VT03 806 aaPredicted RBP16.52■□□□□ 0.24
CPNE7-205ENST00000529800 NUTM2AQ8IVF1 878 aaPredicted RBP16.52■□□□□ 0.24
CPNE7-205ENST00000529800 STRCP1A6NGW2 1772 aa16.51■□□□□ 0.23
CPNE7-205ENST00000529800 ANKLE2Q86XL3 938 aa16.51■□□□□ 0.23
CPNE7-205ENST00000529800 SYCP2Q9BX26 1530 aa16.5■□□□□ 0.23
CPNE7-205ENST00000529800 A2ML1A8K2U0 1454 aa16.5■□□□□ 0.23
CPNE7-205ENST00000529800 CHIC1Q5VXU3 224 aa16.5■□□□□ 0.23
CPNE7-205ENST00000529800 GPATCH8Q9UKJ3 1502 aaKnown RBP16.5■□□□□ 0.23
CPNE7-205ENST00000529800 SPAG9O60271 1321 aaKnown RBP16.49■□□□□ 0.23
CPNE7-205ENST00000529800 FYCO1Q9BQS8 1478 aa16.49■□□□□ 0.23
CPNE7-205ENST00000529800 ZNF777Q9ULD5 760 aaPredicted RBP16.49■□□□□ 0.23
CPNE7-205ENST00000529800 JCADQ9P266 1359 aa16.49■□□□□ 0.23
CPNE7-205ENST00000529800 PLXNC1O60486 1568 aa16.48■□□□□ 0.23
CPNE7-205ENST00000529800 KIAA1107Q9UPP5 1409 aa16.48■□□□□ 0.23
CPNE7-205ENST00000529800 HNRNPMP52272 730 aaKnown RBP eCLIP16.48■□□□□ 0.236e-12■■□□□ 12.6
CPNE7-205ENST00000529800 ATP7AQ04656 1500 aa16.47■□□□□ 0.23
CPNE7-205ENST00000529800 INO80Q9ULG1 1556 aaPredicted RBP16.47■□□□□ 0.23
CPNE7-205ENST00000529800 CLTCQ00610 1675 aaKnown RBP16.46■□□□□ 0.23
CPNE7-205ENST00000529800 ROBO1Q9Y6N7 1651 aa16.46■□□□□ 0.23
CPNE7-205ENST00000529800 NPHP4O75161 1426 aaPredicted RBP16.45■□□□□ 0.22
CPNE7-205ENST00000529800 LRP5O75197 1615 aa16.45■□□□□ 0.22
CPNE7-205ENST00000529800 PLEKHH2Q8IVE3 1493 aa16.45■□□□□ 0.22
CPNE7-205ENST00000529800 A2MP01023 1474 aa16.44■□□□□ 0.22
CPNE7-205ENST00000529800 SENP3-EIF4A1A0A087X0R7 540 aa16.44■□□□□ 0.22
CPNE7-205ENST00000529800 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.43■□□□□ 0.222e-6■■■■□ 22.2
CPNE7-205ENST00000529800 CFDP1Q9UEE9 299 aaPredicted RBP16.42■□□□□ 0.22
CPNE7-205ENST00000529800 ATAD2Q6PL18 1390 aa16.41■□□□□ 0.22
CPNE7-205ENST00000529800 IQGAP1P46940 1657 aa16.41■□□□□ 0.22
CPNE7-205ENST00000529800 PHLPP1O60346 1717 aa16.41■□□□□ 0.22
CPNE7-205ENST00000529800 GGT6Q6P531 493 aa16.4■□□□□ 0.22
CPNE7-205ENST00000529800 ADGBQ8N7X0 1667 aa16.4■□□□□ 0.22
CPNE7-205ENST00000529800 CCNB3Q8WWL7 1395 aa16.39■□□□□ 0.21
CPNE7-205ENST00000529800 MED14O60244 1454 aa16.39■□□□□ 0.21
CPNE7-205ENST00000529800 SPATA31A6Q5VVP1 1343 aa16.39■□□□□ 0.21
CPNE7-205ENST00000529800 XIRP1Q702N8 1843 aaKnown RBP16.38■□□□□ 0.21
CPNE7-205ENST00000529800 LRP6O75581 1613 aa16.38■□□□□ 0.21
CPNE7-205ENST00000529800 RGS12O14924 1447 aa16.38■□□□□ 0.21
CPNE7-205ENST00000529800 DEPDC5O75140 1603 aa16.37■□□□□ 0.21
CPNE7-205ENST00000529800 MBD5Q9P267 1494 aa16.35■□□□□ 0.21
CPNE7-205ENST00000529800 THEMISQ8N1K5 641 aaPredicted RBP16.35■□□□□ 0.21
CPNE7-205ENST00000529800 RTEL1-TNFRSF6BF6WH68 1400 aa16.35■□□□□ 0.21
CPNE7-205ENST00000529800 ZNF644Q9H582 1327 aaPredicted RBP16.34■□□□□ 0.21
CPNE7-205ENST00000529800 MTUS2Q5JR59 1369 aa16.34■□□□□ 0.21
CPNE7-205ENST00000529800 RBM6P78332 1123 aaKnown RBP16.33■□□□□ 0.2
CPNE7-205ENST00000529800 DHX29Q7Z478 1369 aaKnown RBP16.33■□□□□ 0.2
CPNE7-205ENST00000529800 TIAM1Q13009 1591 aa16.33■□□□□ 0.2
CPNE7-205ENST00000529800 CCDC125Q86Z20 511 aa16.31■□□□□ 0.2
CPNE7-205ENST00000529800 TNRQ92752 1358 aa16.29■□□□□ 0.2
CPNE7-205ENST00000529800 FAM135AQ9P2D6 1515 aa16.29■□□□□ 0.2
CPNE7-205ENST00000529800 LRRC9Q6ZRR7 1453 aa16.29■□□□□ 0.2
CPNE7-205ENST00000529800 AFF2P51816 1311 aa16.28■□□□□ 0.2
CPNE7-205ENST00000529800 FBXO31Q5XUX0 539 aaPredicted RBP16.28■□□□□ 0.2
CPNE7-205ENST00000529800 EHBP1L1Q8N3D4 1523 aa16.28■□□□□ 0.2
CPNE7-205ENST00000529800 PZPP20742 1482 aa16.28■□□□□ 0.2
CPNE7-205ENST00000529800 QTRT2Q9H974 415 aaKnown RBP16.27■□□□□ 0.2
CPNE7-205ENST00000529800 KDM5DQ9BY66 1539 aa16.27■□□□□ 0.2
CPNE7-205ENST00000529800 CEP162Q5TB80 1403 aa16.27■□□□□ 0.19
CPNE7-205ENST00000529800 KIF3BO15066 747 aa16.26■□□□□ 0.19
CPNE7-205ENST00000529800 FGD6Q6ZV73 1430 aa16.26■□□□□ 0.19
CPNE7-205ENST00000529800 NGLY1Q96IV0 654 aa16.25■□□□□ 0.19
CPNE7-205ENST00000529800 CCDC141Q6ZP82 1450 aa16.23■□□□□ 0.19
CPNE7-205ENST00000529800 MIA2Q96PC5 1412 aa16.23■□□□□ 0.19
CPNE7-205ENST00000529800 COL16A1Q07092 1604 aaPredicted RBP16.23■□□□□ 0.19
CPNE7-205ENST00000529800 NLRP1Q9C000 1473 aa16.22■□□□□ 0.19
CPNE7-205ENST00000529800 WASHC2CQ9Y4E1 1318 aa16.22■□□□□ 0.19
CPNE7-205ENST00000529800 UGGT1Q9NYU2 1555 aa16.22■□□□□ 0.19
CPNE7-205ENST00000529800 RSPH4AQ5TD94 716 aa16.22■□□□□ 0.19
CPNE7-205ENST00000529800 NHSL1Q5SYE7 1610 aa16.2■□□□□ 0.18
CPNE7-205ENST00000529800 CAMSAP2Q08AD1 1489 aa16.2■□□□□ 0.18
CPNE7-205ENST00000529800 SHPRHQ149N8 1683 aa16.2■□□□□ 0.18
CPNE7-205ENST00000529800 ZC3H13Q5T200 1668 aaKnown RBP16.18■□□□□ 0.18
CPNE7-205ENST00000529800 NCOA2Q15596 1464 aa16.18■□□□□ 0.18
CPNE7-205ENST00000529800 TMEM94Q12767 1356 aa16.18■□□□□ 0.18
CPNE7-205ENST00000529800 ARHGEF5Q12774 1597 aa16.17■□□□□ 0.18
CPNE7-205ENST00000529800 SLAIN2Q9P270 581 aa16.17■□□□□ 0.18
CPNE7-205ENST00000529800 DCAF8L1A6NGE4 600 aa16.15■□□□□ 0.18
CPNE7-205ENST00000529800 NWD1Q149M9 1564 aa16.15■□□□□ 0.18
CPNE7-205ENST00000529800 HRCP23327 699 aa16.14■□□□□ 0.17
CPNE7-205ENST00000529800 C1QTNF8P60827 252 aa16.14■□□□□ 0.17
CPNE7-205ENST00000529800 EP400Q96L91 3159 aa16.14■□□□□ 0.17
CPNE7-205ENST00000529800 PSDA5PKW4 1024 aaPredicted RBP16.13■□□□□ 0.17
CPNE7-205ENST00000529800 TSPY4P0CV99 314 aa16.13■□□□□ 0.17
CPNE7-205ENST00000529800 TSPY10P0CW01 314 aa16.13■□□□□ 0.17
CPNE7-205ENST00000529800 ABCC3O15438 1527 aa16.13■□□□□ 0.17
CPNE7-205ENST00000529800 C8orf37Q96NL8 207 aa16.12■□□□□ 0.17
CPNE7-205ENST00000529800 PROSER2Q86WR7 435 aaPredicted RBP16.11■□□□□ 0.17
CPNE7-205ENST00000529800 MAST1Q9Y2H9 1570 aa16.1■□□□□ 0.17
CPNE7-205ENST00000529800 MSH6P52701 1360 aa16.1■□□□□ 0.17
CPNE7-205ENST00000529800 ERVK-7P63135 1459 aa16.1■□□□□ 0.17
CPNE7-205ENST00000529800 EIF2AK4Q9P2K8 1649 aaKnown RBP16.09■□□□□ 0.17
CPNE7-205ENST00000529800 MROH1Q8NDA8 1641 aa16.08■□□□□ 0.16
CPNE7-205ENST00000529800 SF3B2Q13435 895 aaKnown RBP16.07■□□□□ 0.16
CPNE7-205ENST00000529800 DEFB132Q7Z7B7 95 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms