RNA–Protein interactions for RNA: ENST00000529307.1

CAPRIN1-207, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAPRIN1, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-207ENST00000529307 HIRIP3Q9BW71 556 aaPredicted RBP23.66■■□□□ 1.38
CAPRIN1-207ENST00000529307 POGZQ7Z3K3 1410 aa23.65■■□□□ 1.38
CAPRIN1-207ENST00000529307 KIDINS220Q9ULH0 1771 aa23.64■■□□□ 1.38
CAPRIN1-207ENST00000529307 MAP3K4Q9Y6R4 1608 aa23.64■■□□□ 1.37
CAPRIN1-207ENST00000529307 NBPF8Q3BBV2 869 aa23.64■■□□□ 1.37
CAPRIN1-207ENST00000529307 MYT1LQ9UL68 1186 aa23.63■■□□□ 1.37
CAPRIN1-207ENST00000529307 NEO1Q92859 1461 aa23.63■■□□□ 1.37
CAPRIN1-207ENST00000529307 GLI2P10070 1586 aa23.62■■□□□ 1.37
CAPRIN1-207ENST00000529307 KDM5CP41229 1560 aa23.62■■□□□ 1.37
CAPRIN1-207ENST00000529307 MIER1Q8N108 512 aa23.62■■□□□ 1.37
CAPRIN1-207ENST00000529307 PLA2R1Q13018 1463 aa23.62■■□□□ 1.37
CAPRIN1-207ENST00000529307 DHX29Q7Z478 1369 aaKnown RBP23.61■■□□□ 1.37
CAPRIN1-207ENST00000529307 DEPDC5O75140 1603 aa23.58■■□□□ 1.37
CAPRIN1-207ENST00000529307 DIP2BQ9P265 1576 aa23.57■■□□□ 1.36
CAPRIN1-207ENST00000529307 FAM69CQ0P6D2 419 aa23.57■■□□□ 1.36
CAPRIN1-207ENST00000529307 MLH3Q9UHC1 1453 aa23.56■■□□□ 1.36
CAPRIN1-207ENST00000529307 RAPGEF3O95398 923 aa23.56■■□□□ 1.36
CAPRIN1-207ENST00000529307 KIF3BO15066 747 aa23.55■■□□□ 1.36
CAPRIN1-207ENST00000529307 EIF2AK4Q9P2K8 1649 aaKnown RBP23.53■■□□□ 1.36
CAPRIN1-207ENST00000529307 HECW2Q9P2P5 1572 aa23.53■■□□□ 1.36
CAPRIN1-207ENST00000529307 TSHZ2Q9NRE2 1034 aa23.53■■□□□ 1.36
CAPRIN1-207ENST00000529307 MROH1Q8NDA8 1641 aa23.52■■□□□ 1.36
CAPRIN1-207ENST00000529307 VWDEQ8N2E2 1590 aa23.52■■□□□ 1.36
CAPRIN1-207ENST00000529307 CCDC144AA2RUR9 1427 aa23.52■■□□□ 1.36
CAPRIN1-207ENST00000529307 A2MP01023 1474 aa23.52■■□□□ 1.35
CAPRIN1-207ENST00000529307 FRMPD1Q5SYB0 1578 aa23.51■■□□□ 1.35
CAPRIN1-207ENST00000529307 ATP10AO60312 1499 aa23.51■■□□□ 1.35
CAPRIN1-207ENST00000529307 HSPA5P11021 654 aaKnown RBP23.5■■□□□ 1.35
CAPRIN1-207ENST00000529307 PRDM15P57071 1507 aaPredicted RBP23.49■■□□□ 1.35
CAPRIN1-207ENST00000529307 E9PCH4 1651 aa23.49■■□□□ 1.35
CAPRIN1-207ENST00000529307 ABCA6Q8N139 1617 aa23.48■■□□□ 1.35
CAPRIN1-207ENST00000529307 RICTORQ6R327 1708 aa23.47■■□□□ 1.35
CAPRIN1-207ENST00000529307 DDX10Q13206 875 aaKnown RBP23.46■■□□□ 1.35
CAPRIN1-207ENST00000529307 UHRF1BP1Q6BDS2 1440 aa23.46■■□□□ 1.35
CAPRIN1-207ENST00000529307 EIF4G2P78344 907 aaKnown RBP eCLIP23.45■■□□□ 1.35
CAPRIN1-207ENST00000529307 ZNF326Q5BKZ1 582 aaKnown RBP23.45■■□□□ 1.35
CAPRIN1-207ENST00000529307 ERICH6Q7L0X2 663 aa23.45■■□□□ 1.35
CAPRIN1-207ENST00000529307 SUPT16HQ9Y5B9 1047 aaKnown RBP23.45■■□□□ 1.34
CAPRIN1-207ENST00000529307 KANK1Q14678 1352 aa23.45■■□□□ 1.34
CAPRIN1-207ENST00000529307 PPRC1Q5VV67 1664 aaKnown RBP23.45■■□□□ 1.34
CAPRIN1-207ENST00000529307 TET3O43151 1660 aa23.44■■□□□ 1.34
CAPRIN1-207ENST00000529307 DCAF11Q8TEB1 546 aa23.43■■□□□ 1.34
CAPRIN1-207ENST00000529307 KDM2AQ9Y2K7 1162 aa23.42■■□□□ 1.34
CAPRIN1-207ENST00000529307 RNF17Q9BXT8 1623 aaKnown RBP23.42■■□□□ 1.34
CAPRIN1-207ENST00000529307 TSPOAP1O95153 1857 aa23.41■■□□□ 1.34
CAPRIN1-207ENST00000529307 PTPRTO14522 1441 aa23.41■■□□□ 1.34
CAPRIN1-207ENST00000529307 DIP2CQ9Y2E4 1556 aa23.41■■□□□ 1.34
CAPRIN1-207ENST00000529307 RGL3Q3MIN7 710 aa23.4■■□□□ 1.34
CAPRIN1-207ENST00000529307 SPATA31E1Q6ZUB1 1445 aa23.4■■□□□ 1.34
CAPRIN1-207ENST00000529307 YEATS2Q9ULM3 1422 aa23.39■■□□□ 1.34
CAPRIN1-207ENST00000529307 TRPM2O94759 1503 aa23.38■■□□□ 1.33
CAPRIN1-207ENST00000529307 RALGAPBQ86X10 1494 aa23.36■■□□□ 1.33
CAPRIN1-207ENST00000529307 SPHKAPQ2M3C7 1700 aa23.36■■□□□ 1.33
CAPRIN1-207ENST00000529307 BCORL1Q5H9F3 1711 aa23.36■■□□□ 1.33
CAPRIN1-207ENST00000529307 LMTK2Q8IWU2 1503 aa23.36■■□□□ 1.33
CAPRIN1-207ENST00000529307 WASHC2AQ641Q2 1341 aa23.36■■□□□ 1.33
CAPRIN1-207ENST00000529307 EFCAB6Q5THR3 1501 aa23.35■■□□□ 1.33
CAPRIN1-207ENST00000529307 KIF13AQ9H1H9 1805 aa23.35■■□□□ 1.33
CAPRIN1-207ENST00000529307 C11orf95C9JLR9 678 aaPredicted RBP23.34■■□□□ 1.33
CAPRIN1-207ENST00000529307 GGT6Q6P531 493 aa23.34■■□□□ 1.33
CAPRIN1-207ENST00000529307 CEP152O94986 1710 aa23.33■■□□□ 1.33
CAPRIN1-207ENST00000529307 CLTCL1P53675 1640 aa23.33■■□□□ 1.32
CAPRIN1-207ENST00000529307 PRAG1Q86YV5 1406 aa23.33■■□□□ 1.32
CAPRIN1-207ENST00000529307 ZMYM4Q5VZL5 1548 aa23.32■■□□□ 1.32
CAPRIN1-207ENST00000529307 USP47Q96K76 1375 aa23.3■■□□□ 1.32
CAPRIN1-207ENST00000529307 UGGT1Q9NYU2 1555 aa23.27■■□□□ 1.32
CAPRIN1-207ENST00000529307 ABCC3O15438 1527 aa23.27■■□□□ 1.32
CAPRIN1-207ENST00000529307 CARD11Q9BXL7 1154 aa23.26■■□□□ 1.31
CAPRIN1-207ENST00000529307 COL17A1Q9UMD9 1497 aaPredicted RBP23.26■■□□□ 1.31
CAPRIN1-207ENST00000529307 NPATQ14207 1427 aa23.26■■□□□ 1.31
CAPRIN1-207ENST00000529307 TRPM1Q7Z4N2 1603 aa23.25■■□□□ 1.31
CAPRIN1-207ENST00000529307 CCDC7Q96M83 1385 aa23.25■■□□□ 1.31
CAPRIN1-207ENST00000529307 WASHC2CQ9Y4E1 1318 aa23.24■■□□□ 1.31
CAPRIN1-207ENST00000529307 ROCK2O75116 1388 aaKnown RBP23.23■■□□□ 1.31
CAPRIN1-207ENST00000529307 NBPF1Q3BBV0 1214 aa23.22■■□□□ 1.31
CAPRIN1-207ENST00000529307 KIF7Q2M1P5 1343 aa23.21■■□□□ 1.31
CAPRIN1-207ENST00000529307 GPRASP1Q5JY77 1395 aa23.18■■□□□ 1.3
CAPRIN1-207ENST00000529307 CAMSAP1Q5T5Y3 1602 aa23.18■■□□□ 1.3
CAPRIN1-207ENST00000529307 NEURL4Q96JN8 1562 aa23.17■■□□□ 1.3
CAPRIN1-207ENST00000529307 ST20-MTHFSA0A0A6YYL1 179 aa23.15■■□□□ 1.3
CAPRIN1-207ENST00000529307 CFAP65Q6ZU64 1925 aaKnown RBP23.15■■□□□ 1.3
CAPRIN1-207ENST00000529307 MADDQ8WXG6 1647 aa23.15■■□□□ 1.3
CAPRIN1-207ENST00000529307 POLR1AO95602 1720 aaPredicted RBP23.15■■□□□ 1.3
CAPRIN1-207ENST00000529307 SIGLEC1Q9BZZ2 1709 aa23.15■■□□□ 1.3
CAPRIN1-207ENST00000529307 CNTLNQ9NXG0 1405 aa23.13■■□□□ 1.29
CAPRIN1-207ENST00000529307 REREQ9P2R6 1566 aa23.13■■□□□ 1.29
CAPRIN1-207ENST00000529307 NOS1P29475 1434 aa23.13■■□□□ 1.29
CAPRIN1-207ENST00000529307 MROH2AA6NES4 1674 aa23.12■■□□□ 1.29
CAPRIN1-207ENST00000529307 ANP32CO43423 234 aa23.12■■□□□ 1.29
CAPRIN1-207ENST00000529307 ZC3H13Q5T200 1668 aaKnown RBP23.11■■□□□ 1.29
CAPRIN1-207ENST00000529307 ARHGAP31Q2M1Z3 1444 aa23.11■■□□□ 1.29
CAPRIN1-207ENST00000529307 KIF1BO60333 1816 aa23.11■■□□□ 1.29
CAPRIN1-207ENST00000529307 LAMC1P11047 1609 aa23.1■■□□□ 1.29
CAPRIN1-207ENST00000529307 ADGRB3O60242 1522 aa23.1■■□□□ 1.29
CAPRIN1-207ENST00000529307 AGLP35573 1532 aa23.1■■□□□ 1.29
CAPRIN1-207ENST00000529307 STAC3Q96MF2 364 aa23.09■■□□□ 1.29
CAPRIN1-207ENST00000529307 SYNMO15061 1565 aa23.08■■□□□ 1.29
CAPRIN1-207ENST00000529307 ARHGEF40Q8TER5 1519 aa23.07■■□□□ 1.28
CAPRIN1-207ENST00000529307 MYOM2P54296 1465 aa23.05■■□□□ 1.28
CAPRIN1-207ENST00000529307 ADGRF5Q8IZF2 1346 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms