RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 MROH2AA6NES4 1674 aa21.92■■□□□ 1.1
CAPN1-216ENST00000528739 NPATQ14207 1427 aa21.92■■□□□ 1.1
CAPN1-216ENST00000528739 SETD1BQ9UPS6 1966 aaKnown RBP21.91■■□□□ 1.1
CAPN1-216ENST00000528739 ITGAEP38570 1179 aa21.91■■□□□ 1.1
CAPN1-216ENST00000528739 FBXO31Q5XUX0 539 aaPredicted RBP21.91■■□□□ 1.1
CAPN1-216ENST00000528739 DUOX2Q9NRD8 1548 aa21.9■■□□□ 1.1
CAPN1-216ENST00000528739 SHANK2Q9UPX8 1470 aa21.9■■□□□ 1.1
CAPN1-216ENST00000528739 PTPRKQ15262 1439 aa21.89■■□□□ 1.1
CAPN1-216ENST00000528739 DNMT1P26358 1616 aaKnown RBP21.89■■□□□ 1.09
CAPN1-216ENST00000528739 DMRT2Q9Y5R5 561 aa21.89■■□□□ 1.09
CAPN1-216ENST00000528739 KDM5DQ9BY66 1539 aa21.89■■□□□ 1.09
CAPN1-216ENST00000528739 CROCC2H7BZ55 1655 aa21.85■■□□□ 1.09
CAPN1-216ENST00000528739 TNRQ92752 1358 aa21.84■■□□□ 1.09
CAPN1-216ENST00000528739 ERBINQ96RT1 1412 aa21.83■■□□□ 1.09
CAPN1-216ENST00000528739 KANK1Q14678 1352 aa21.83■■□□□ 1.08
CAPN1-216ENST00000528739 NCOA1Q15788 1441 aa21.81■■□□□ 1.08
CAPN1-216ENST00000528739 EIF2AK4Q9P2K8 1649 aaKnown RBP21.81■■□□□ 1.08
CAPN1-216ENST00000528739 PZPP20742 1482 aa21.81■■□□□ 1.08
CAPN1-216ENST00000528739 NCKAP5LQ9HCH0 1330 aa21.8■■□□□ 1.08
CAPN1-216ENST00000528739 FAM135AQ9P2D6 1515 aa21.8■■□□□ 1.08
CAPN1-216ENST00000528739 ILDR1Q86SU0 546 aaPredicted RBP21.8■■□□□ 1.08
CAPN1-216ENST00000528739 RNF17Q9BXT8 1623 aaKnown RBP21.78■■□□□ 1.08
CAPN1-216ENST00000528739 ABCC3O15438 1527 aa21.78■■□□□ 1.08
CAPN1-216ENST00000528739 CAMSAP1Q5T5Y3 1602 aa21.77■■□□□ 1.07
CAPN1-216ENST00000528739 MYO3AQ8NEV4 1616 aa21.76■■□□□ 1.07
CAPN1-216ENST00000528739 CEP170BQ9Y4F5 1589 aaPredicted RBP21.74■■□□□ 1.07
CAPN1-216ENST00000528739 ADGRL2O95490 1459 aa21.74■■□□□ 1.07
CAPN1-216ENST00000528739 ANKRD50Q9ULJ7 1429 aa21.73■■□□□ 1.07
CAPN1-216ENST00000528739 A2ML1A8K2U0 1454 aa21.73■■□□□ 1.07
CAPN1-216ENST00000528739 PKD2Q13563 968 aa21.73■■□□□ 1.07
CAPN1-216ENST00000528739 THEMISQ8N1K5 641 aaPredicted RBP21.73■■□□□ 1.07
CAPN1-216ENST00000528739 ZC3H13Q5T200 1668 aaKnown RBP21.72■■□□□ 1.07
CAPN1-216ENST00000528739 MROH1Q8NDA8 1641 aa21.71■■□□□ 1.07
CAPN1-216ENST00000528739 STRCQ7RTU9 1775 aa21.71■■□□□ 1.07
CAPN1-216ENST00000528739 PTPRTO14522 1441 aa21.7■■□□□ 1.06
CAPN1-216ENST00000528739 CEP152O94986 1710 aa21.69■■□□□ 1.06
CAPN1-216ENST00000528739 CERKQ8TCT0 537 aa21.69■■□□□ 1.06
CAPN1-216ENST00000528739 STAG3Q9UJ98 1225 aa21.69■■□□□ 1.06
CAPN1-216ENST00000528739 FBXO41Q8TF61 875 aa21.68■■□□□ 1.06
CAPN1-216ENST00000528739 NLRP1Q9C000 1473 aa21.68■■□□□ 1.06
CAPN1-216ENST00000528739 PRDM15P57071 1507 aaPredicted RBP21.68■■□□□ 1.06
CAPN1-216ENST00000528739 ERVK-7P63135 1459 aa21.67■■□□□ 1.06
CAPN1-216ENST00000528739 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.67■■□□□ 1.06
CAPN1-216ENST00000528739 ANKLE2Q86XL3 938 aa21.67■■□□□ 1.06
CAPN1-216ENST00000528739 ZNF142P52746 1687 aaPredicted RBP21.66■■□□□ 1.06
CAPN1-216ENST00000528739 ROCK1Q13464 1354 aa21.66■■□□□ 1.06
CAPN1-216ENST00000528739 PLA2R1Q13018 1463 aa21.65■■□□□ 1.06
CAPN1-216ENST00000528739 UGGT1Q9NYU2 1555 aa21.65■■□□□ 1.06
CAPN1-216ENST00000528739 CFAP65Q6ZU64 1925 aaKnown RBP21.63■■□□□ 1.05
CAPN1-216ENST00000528739 ARHGAP31Q2M1Z3 1444 aa21.63■■□□□ 1.05
CAPN1-216ENST00000528739 SPATA31D1Q6ZQQ2 1576 aa21.62■■□□□ 1.05
CAPN1-216ENST00000528739 DEPDC5O75140 1603 aa21.62■■□□□ 1.05
CAPN1-216ENST00000528739 RRBP1Q9P2E9 1410 aaKnown RBP21.61■■□□□ 1.05
CAPN1-216ENST00000528739 NUP155O75694 1391 aa21.58■■□□□ 1.04
CAPN1-216ENST00000528739 ZNF335Q9H4Z2 1342 aaPredicted RBP21.57■■□□□ 1.04
CAPN1-216ENST00000528739 LMTK2Q8IWU2 1503 aa21.57■■□□□ 1.04
CAPN1-216ENST00000528739 IDI1Q13907 227 aa21.56■■□□□ 1.04
CAPN1-216ENST00000528739 TXNDC2Q86VQ3 553 aa21.55■■□□□ 1.04
CAPN1-216ENST00000528739 EID1Q9Y6B2 187 aa21.55■■□□□ 1.04
CAPN1-216ENST00000528739 VWDEQ8N2E2 1590 aa21.55■■□□□ 1.04
CAPN1-216ENST00000528739 CHGAP10645 457 aaKnown RBP21.53■■□□□ 1.04
CAPN1-216ENST00000528739 TRIM52Q96A61 297 aa21.52■■□□□ 1.04
CAPN1-216ENST00000528739 SLC52A1Q9NWF4 448 aa21.52■■□□□ 1.04
CAPN1-216ENST00000528739 EFCAB6Q5THR3 1501 aa21.51■■□□□ 1.03
CAPN1-216ENST00000528739 NPHP4O75161 1426 aaPredicted RBP21.51■■□□□ 1.03
CAPN1-216ENST00000528739 BCANQ96GW7 911 aa21.5■■□□□ 1.03
CAPN1-216ENST00000528739 UNC13BO14795 1591 aa21.48■■□□□ 1.03
CAPN1-216ENST00000528739 NOS1P29475 1434 aa21.47■■□□□ 1.03
CAPN1-216ENST00000528739 RPRD2Q5VT52 1461 aaKnown RBP21.47■■□□□ 1.03
CAPN1-216ENST00000528739 LTKP29376 864 aa21.47■■□□□ 1.03
CAPN1-216ENST00000528739 POLR1AO95602 1720 aaPredicted RBP21.46■■□□□ 1.03
CAPN1-216ENST00000528739 PIK3C2BO00750 1634 aa21.45■■□□□ 1.02
CAPN1-216ENST00000528739 TET3O43151 1660 aa21.45■■□□□ 1.02
CAPN1-216ENST00000528739 SENP3Q9H4L4 574 aaPredicted RBP21.45■■□□□ 1.02
CAPN1-216ENST00000528739 UBR1Q8IWV7 1749 aa21.45■■□□□ 1.02
CAPN1-216ENST00000528739 NEURL4Q96JN8 1562 aa21.44■■□□□ 1.02
CAPN1-216ENST00000528739 LTBP4Q8N2S1 1624 aa21.44■■□□□ 1.02
CAPN1-216ENST00000528739 TMEM2Q9UHN6 1383 aa21.44■■□□□ 1.02
CAPN1-216ENST00000528739 NAIPQ13075 1403 aa21.44■■□□□ 1.02
CAPN1-216ENST00000528739 SCAF11Q99590 1463 aaKnown RBP21.44■■□□□ 1.02
CAPN1-216ENST00000528739 PPP1R15AO75807 674 aaPredicted RBP21.43■■□□□ 1.02
CAPN1-216ENST00000528739 SYNMO15061 1565 aa21.43■■□□□ 1.02
CAPN1-216ENST00000528739 MED14O60244 1454 aa21.42■■□□□ 1.02
CAPN1-216ENST00000528739 HDGFP51858 240 aaKnown RBP21.42■■□□□ 1.02
CAPN1-216ENST00000528739 UBAP1LF5GYI3 381 aa21.4■■□□□ 1.02
CAPN1-216ENST00000528739 IQGAP3Q86VI3 1631 aa21.4■■□□□ 1.02
CAPN1-216ENST00000528739 GCC2Q8IWJ2 1684 aa21.39■■□□□ 1.01
CAPN1-216ENST00000528739 SLIT1O75093 1534 aa21.39■■□□□ 1.01
CAPN1-216ENST00000528739 IQGAP1P46940 1657 aa21.38■■□□□ 1.01
CAPN1-216ENST00000528739 ARHGAP23Q9P227 1491 aa21.38■■□□□ 1.01
CAPN1-216ENST00000528739 HFM1A2PYH4 1435 aa21.38■■□□□ 1.01
CAPN1-216ENST00000528739 SLC4A1APQ9BWU0 796 aaKnown RBP21.37■■□□□ 1.01
CAPN1-216ENST00000528739 SCAF1Q9H7N4 1312 aaKnown RBP21.36■■□□□ 1.01
CAPN1-216ENST00000528739 ADGRB3O60242 1522 aa21.36■■□□□ 1.01
CAPN1-216ENST00000528739 NUTM2DQ5VT03 806 aaPredicted RBP21.36■■□□□ 1.01
CAPN1-216ENST00000528739 SLC26A8Q96RN1 970 aa21.36■■□□□ 1.01
CAPN1-216ENST00000528739 E9PCH4 1651 aa21.36■■□□□ 1.01
CAPN1-216ENST00000528739 ZNF326Q5BKZ1 582 aaKnown RBP21.35■■□□□ 1.01
CAPN1-216ENST00000528739 IQSEC2Q5JU85 1478 aa21.33■■□□□ 1.01
CAPN1-216ENST00000528739 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms