RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 MYBBP1AQ9BQG0 1328 aaKnown RBP10.02□□□□□ -0.8
C11orf54-207ENST00000528288 FANCIQ9NVI1 1328 aa10.02□□□□□ -0.81
C11orf54-207ENST00000528288 UHRF1BP1Q6BDS2 1440 aa10.02□□□□□ -0.81
C11orf54-207ENST00000528288 PLIN1O60240 522 aa10.02□□□□□ -0.81
C11orf54-207ENST00000528288 PANK3Q9H999 370 aa10.02□□□□□ -0.81
C11orf54-207ENST00000528288 EXOC6Q8TAG9 804 aa10.01□□□□□ -0.81
C11orf54-207ENST00000528288 PLEKHH2Q8IVE3 1493 aa10.01□□□□□ -0.81
C11orf54-207ENST00000528288 SKAP1Q86WV1 359 aa10.01□□□□□ -0.81
C11orf54-207ENST00000528288 SYCP2Q9BX26 1530 aa10.01□□□□□ -0.81
C11orf54-207ENST00000528288 FAM135AQ9P2D6 1515 aa10.01□□□□□ -0.81
C11orf54-207ENST00000528288 SAMD9LQ8IVG5 1584 aa10.01□□□□□ -0.81
C11orf54-207ENST00000528288 POLR1AO95602 1720 aaPredicted RBP10.01□□□□□ -0.81
C11orf54-207ENST00000528288 MYT1LQ9UL68 1186 aa10.01□□□□□ -0.81
C11orf54-207ENST00000528288 ARHGAP5Q13017 1502 aa10.01□□□□□ -0.81
C11orf54-207ENST00000528288 DISP3Q9P2K9 1392 aa10□□□□□ -0.81
C11orf54-207ENST00000528288 CCDC141Q6ZP82 1450 aa10□□□□□ -0.81
C11orf54-207ENST00000528288 PAK3O75914 559 aaPredicted RBP9.99□□□□□ -0.81
C11orf54-207ENST00000528288 ERCC6L2Q5T890 1561 aa9.99□□□□□ -0.81
C11orf54-207ENST00000528288 PLA2R1Q13018 1463 aa9.99□□□□□ -0.81
C11orf54-207ENST00000528288 NBR1Q14596 966 aa9.99□□□□□ -0.81
C11orf54-207ENST00000528288 RALBP1Q15311 655 aa9.99□□□□□ -0.81
C11orf54-207ENST00000528288 ARID4BQ4LE39 1312 aaPredicted RBP9.99□□□□□ -0.81
C11orf54-207ENST00000528288 SHANK2Q9UPX8 1470 aa9.99□□□□□ -0.81
C11orf54-207ENST00000528288 NPM2Q86SE8 214 aaKnown RBP9.99□□□□□ -0.81
C11orf54-207ENST00000528288 AFAP1Q8N556 730 aa9.98□□□□□ -0.81
C11orf54-207ENST00000528288 KTN1Q86UP2 1357 aaKnown RBP9.98□□□□□ -0.81
C11orf54-207ENST00000528288 PRAG1Q86YV5 1406 aa9.98□□□□□ -0.81
C11orf54-207ENST00000528288 CDC42BPBQ9Y5S2 1711 aa9.98□□□□□ -0.81
C11orf54-207ENST00000528288 PER1O15534 1290 aaPredicted RBP9.97□□□□□ -0.81
C11orf54-207ENST00000528288 RCAN3Q9UKA8 241 aa9.97□□□□□ -0.81
C11orf54-207ENST00000528288 NLRP13Q86W25 1043 aa9.97□□□□□ -0.81
C11orf54-207ENST00000528288 TESK2Q96S53 571 aa9.97□□□□□ -0.81
C11orf54-207ENST00000528288 TTC37Q6PGP7 1564 aa9.97□□□□□ -0.81
C11orf54-207ENST00000528288 A2MP01023 1474 aa9.97□□□□□ -0.81
C11orf54-207ENST00000528288 BRD4O60885 1362 aaPredicted RBP9.97□□□□□ -0.81
C11orf54-207ENST00000528288 RRP1P56182 461 aaKnown RBP9.96□□□□□ -0.81
C11orf54-207ENST00000528288 KDM5DQ9BY66 1539 aa9.96□□□□□ -0.82
C11orf54-207ENST00000528288 ARHGEF12Q9NZN5 1544 aa9.96□□□□□ -0.82
C11orf54-207ENST00000528288 LRPPRCP42704 1394 aaKnown RBP9.95□□□□□ -0.82
C11orf54-207ENST00000528288 RNF123Q5XPI4 1314 aa9.95□□□□□ -0.82
C11orf54-207ENST00000528288 SENP3Q9H4L4 574 aaPredicted RBP9.95□□□□□ -0.82
C11orf54-207ENST00000528288 RSPH4AQ5TD94 716 aa9.94□□□□□ -0.82
C11orf54-207ENST00000528288 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.94□□□□□ -0.82
C11orf54-207ENST00000528288 TMF1P82094 1093 aa9.93□□□□□ -0.82
C11orf54-207ENST00000528288 ARHGEF5Q12774 1597 aa9.93□□□□□ -0.82
C11orf54-207ENST00000528288 PARD3Q8TEW0 1356 aa9.93□□□□□ -0.82
C11orf54-207ENST00000528288 ADAMTS8Q9UP79 889 aa9.93□□□□□ -0.82
C11orf54-207ENST00000528288 BCL11AQ9H165 835 aa9.92□□□□□ -0.82
C11orf54-207ENST00000528288 NOP58Q9Y2X3 529 aaKnown RBP9.92□□□□□ -0.82
C11orf54-207ENST00000528288 TRAPPC8Q9Y2L5 1435 aa9.92□□□□□ -0.82
C11orf54-207ENST00000528288 PREX2Q70Z35 1606 aa9.92□□□□□ -0.82
C11orf54-207ENST00000528288 EFCAB2Q5VUJ9 269 aa9.92□□□□□ -0.82
C11orf54-207ENST00000528288 ERBINQ96RT1 1412 aa9.92□□□□□ -0.82
C11orf54-207ENST00000528288 CHD1O14646 1710 aa9.92□□□□□ -0.82
C11orf54-207ENST00000528288 C20orf194Q5TEA3 1177 aa9.92□□□□□ -0.82
C11orf54-207ENST00000528288 CCDC146Q8IYE0 955 aa9.91□□□□□ -0.82
C11orf54-207ENST00000528288 TRPM1Q7Z4N2 1603 aa9.91□□□□□ -0.82
C11orf54-207ENST00000528288 CRBNQ96SW2 442 aa9.91□□□□□ -0.82
C11orf54-207ENST00000528288 SPAG9O60271 1321 aaKnown RBP9.9□□□□□ -0.82
C11orf54-207ENST00000528288 KNSTRNQ9Y448 316 aa9.9□□□□□ -0.82
C11orf54-207ENST00000528288 ANP32AP39687 249 aaKnown RBP9.89□□□□□ -0.83
C11orf54-207ENST00000528288 KIF3BO15066 747 aa9.89□□□□□ -0.83
C11orf54-207ENST00000528288 CHGAP10645 457 aaKnown RBP9.89□□□□□ -0.83
C11orf54-207ENST00000528288 COL17A1Q9UMD9 1497 aaPredicted RBP9.89□□□□□ -0.83
C11orf54-207ENST00000528288 PPP2R1AP30153 589 aa9.87□□□□□ -0.83
C11orf54-207ENST00000528288 WDR43Q15061 677 aaKnown RBP eCLIP9.87□□□□□ -0.83
C11orf54-207ENST00000528288 CFAP70Q5T0N1 1121 aa9.87□□□□□ -0.83
C11orf54-207ENST00000528288 GPRASP1Q5JY77 1395 aa9.87□□□□□ -0.83
C11orf54-207ENST00000528288 TNNT2P45379 298 aaPredicted RBP9.87□□□□□ -0.83
C11orf54-207ENST00000528288 E9PCH4 1651 aa9.86□□□□□ -0.83
C11orf54-207ENST00000528288 ZBTB47Q9UFB7 747 aaPredicted RBP9.86□□□□□ -0.83
C11orf54-207ENST00000528288 MAGI2Q86UL8 1455 aa9.86□□□□□ -0.83
C11orf54-207ENST00000528288 IPO9Q96P70 1041 aaKnown RBP9.86□□□□□ -0.83
C11orf54-207ENST00000528288 PLCH2O75038 1416 aa9.86□□□□□ -0.83
C11orf54-207ENST00000528288 ABCC2Q92887 1545 aa9.85□□□□□ -0.83
C11orf54-207ENST00000528288 PDE4AP27815 886 aa9.85□□□□□ -0.83
C11orf54-207ENST00000528288 LAS1LQ9Y4W2 734 aaKnown RBP9.85□□□□□ -0.83
C11orf54-207ENST00000528288 DEKP35659 375 aaKnown RBP9.85□□□□□ -0.83
C11orf54-207ENST00000528288 NUTM2DQ5VT03 806 aaPredicted RBP9.85□□□□□ -0.83
C11orf54-207ENST00000528288 MYO5CQ9NQX4 1742 aa9.85□□□□□ -0.83
C11orf54-207ENST00000528288 UNC13BO14795 1591 aa9.85□□□□□ -0.83
C11orf54-207ENST00000528288 PLEKHH1Q9ULM0 1364 aa9.84□□□□□ -0.83
C11orf54-207ENST00000528288 PRDM15P57071 1507 aaPredicted RBP9.84□□□□□ -0.83
C11orf54-207ENST00000528288 DUOX2Q9NRD8 1548 aa9.84□□□□□ -0.83
C11orf54-207ENST00000528288 PDE3BQ13370 1112 aa9.84□□□□□ -0.83
C11orf54-207ENST00000528288 AMER1Q5JTC6 1135 aaPredicted RBP9.84□□□□□ -0.83
C11orf54-207ENST00000528288 SPINK5Q9NQ38 1064 aaPredicted RBP9.83□□□□□ -0.84
C11orf54-207ENST00000528288 ADGRF5Q8IZF2 1346 aa9.83□□□□□ -0.84
C11orf54-207ENST00000528288 SCAPERQ9BY12 1400 aa9.83□□□□□ -0.84
C11orf54-207ENST00000528288 IQGAP3Q86VI3 1631 aa9.83□□□□□ -0.84
C11orf54-207ENST00000528288 APAF1O14727 1248 aa9.82□□□□□ -0.84
C11orf54-207ENST00000528288 NEUROD2Q15784 382 aa9.82□□□□□ -0.84
C11orf54-207ENST00000528288 WDR7Q9Y4E6 1490 aa9.82□□□□□ -0.84
C11orf54-207ENST00000528288 UGGT1Q9NYU2 1555 aa9.82□□□□□ -0.84
C11orf54-207ENST00000528288 MAST1Q9Y2H9 1570 aa9.81□□□□□ -0.84
C11orf54-207ENST00000528288 SLC4A3P48751 1232 aa9.81□□□□□ -0.84
C11orf54-207ENST00000528288 DMRT2Q9Y5R5 561 aa9.81□□□□□ -0.84
C11orf54-207ENST00000528288 ZCCHC11Q5TAX3 1644 aaKnown RBP9.81□□□□□ -0.84
C11orf54-207ENST00000528288 ATP10AO60312 1499 aa9.81□□□□□ -0.84
C11orf54-207ENST00000528288 DUSP27Q5VZP5 1158 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms