RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 FBXO31Q5XUX0 539 aaPredicted RBP12.26□□□□□ -0.45
VPS26B-204ENST00000527586 ARHGAP5Q13017 1502 aa12.25□□□□□ -0.45
VPS26B-204ENST00000527586 DEPDC5O75140 1603 aa12.25□□□□□ -0.45
VPS26B-204ENST00000527586 IQGAP1P46940 1657 aa12.25□□□□□ -0.45
VPS26B-204ENST00000527586 SENP3-EIF4A1A0A087X0R7 540 aa12.24□□□□□ -0.45
VPS26B-204ENST00000527586 AFF2P51816 1311 aa12.24□□□□□ -0.45
VPS26B-204ENST00000527586 RBM6P78332 1123 aaKnown RBP12.24□□□□□ -0.45
VPS26B-204ENST00000527586 FAM135AQ9P2D6 1515 aa12.22□□□□□ -0.45
VPS26B-204ENST00000527586 QTRT2Q9H974 415 aaKnown RBP12.22□□□□□ -0.45
VPS26B-204ENST00000527586 LRP5O75197 1615 aa12.22□□□□□ -0.45
VPS26B-204ENST00000527586 PHLPP1O60346 1717 aa12.21□□□□□ -0.45
VPS26B-204ENST00000527586 MYO5CQ9NQX4 1742 aa12.21□□□□□ -0.45
VPS26B-204ENST00000527586 KDM5DQ9BY66 1539 aa12.21□□□□□ -0.46
VPS26B-204ENST00000527586 KIDINS220Q9ULH0 1771 aa12.2□□□□□ -0.46
VPS26B-204ENST00000527586 TMEM94Q12767 1356 aa12.2□□□□□ -0.46
VPS26B-204ENST00000527586 ITSN2Q9NZM3 1697 aa12.2□□□□□ -0.46
VPS26B-204ENST00000527586 SAMD9Q5K651 1589 aa12.2□□□□□ -0.46
VPS26B-204ENST00000527586 LRRC9Q6ZRR7 1453 aa12.2□□□□□ -0.46
VPS26B-204ENST00000527586 UGGT1Q9NYU2 1555 aa12.19□□□□□ -0.46
VPS26B-204ENST00000527586 XIRP1Q702N8 1843 aaKnown RBP12.19□□□□□ -0.46
VPS26B-204ENST00000527586 CCDC125Q86Z20 511 aa12.19□□□□□ -0.46
VPS26B-204ENST00000527586 FGD6Q6ZV73 1430 aa12.19□□□□□ -0.46
VPS26B-204ENST00000527586 SLAIN2Q9P270 581 aa12.18□□□□□ -0.46
VPS26B-204ENST00000527586 RANGAP1P46060 587 aaPredicted RBP12.17□□□□□ -0.46
VPS26B-204ENST00000527586 NGLY1Q96IV0 654 aa12.16□□□□□ -0.46
VPS26B-204ENST00000527586 MIA2Q96PC5 1412 aa12.15□□□□□ -0.46
VPS26B-204ENST00000527586 COL16A1Q07092 1604 aaPredicted RBP12.15□□□□□ -0.47
VPS26B-204ENST00000527586 NLRP1Q9C000 1473 aa12.14□□□□□ -0.47
VPS26B-204ENST00000527586 SPAG9O60271 1321 aaKnown RBP12.14□□□□□ -0.47
VPS26B-204ENST00000527586 PROSER2Q86WR7 435 aaPredicted RBP12.14□□□□□ -0.47
VPS26B-204ENST00000527586 ATP7AQ04656 1500 aa12.13□□□□□ -0.47
VPS26B-204ENST00000527586 A2MP01023 1474 aa12.13□□□□□ -0.47
VPS26B-204ENST00000527586 HRCP23327 699 aa12.12□□□□□ -0.47
VPS26B-204ENST00000527586 C8orf37Q96NL8 207 aa12.12□□□□□ -0.47
VPS26B-204ENST00000527586 PRXQ9BXM0 1461 aa12.12□□□□□ -0.47
VPS26B-204ENST00000527586 ZC3H13Q5T200 1668 aaKnown RBP12.11□□□□□ -0.47
VPS26B-204ENST00000527586 PZPP20742 1482 aa12.11□□□□□ -0.47
VPS26B-204ENST00000527586 PSDA5PKW4 1024 aaPredicted RBP12.11□□□□□ -0.47
VPS26B-204ENST00000527586 KIF14Q15058 1648 aa12.11□□□□□ -0.47
VPS26B-204ENST00000527586 MAP3K1Q13233 1512 aa12.11□□□□□ -0.47
VPS26B-204ENST00000527586 CDK11AQ9UQ88 783 aaPredicted RBP12.1□□□□□ -0.47
VPS26B-204ENST00000527586 PLXNC1O60486 1568 aa12.09□□□□□ -0.47
VPS26B-204ENST00000527586 MSH6P52701 1360 aa12.09□□□□□ -0.47
VPS26B-204ENST00000527586 DEFB132Q7Z7B7 95 aa12.09□□□□□ -0.47
VPS26B-204ENST00000527586 ATP1B4Q9UN42 357 aaPredicted RBP12.09□□□□□ -0.47
VPS26B-204ENST00000527586 SAMD9LQ8IVG5 1584 aa12.09□□□□□ -0.47
VPS26B-204ENST00000527586 KCNA6P17658 529 aa12.08□□□□□ -0.48
VPS26B-204ENST00000527586 LTKP29376 864 aa12.08□□□□□ -0.48
VPS26B-204ENST00000527586 SCAF11Q99590 1463 aaKnown RBP12.08□□□□□ -0.48
VPS26B-204ENST00000527586 TXNDC2Q86VQ3 553 aa12.07□□□□□ -0.48
VPS26B-204ENST00000527586 NHSL1Q5SYE7 1610 aa12.07□□□□□ -0.48
VPS26B-204ENST00000527586 SHPRHQ149N8 1683 aa12.06□□□□□ -0.48
VPS26B-204ENST00000527586 NWD1Q149M9 1564 aa12.06□□□□□ -0.48
VPS26B-204ENST00000527586 EP400Q96L91 3159 aa12.06□□□□□ -0.48
VPS26B-204ENST00000527586 C1QTNF8P60827 252 aa12.05□□□□□ -0.48
VPS26B-204ENST00000527586 TROQ12816 1431 aaPredicted RBP12.04□□□□□ -0.48
VPS26B-204ENST00000527586 HNRNPMP52272 730 aaKnown RBP eCLIP12.04□□□□□ -0.481e-6■■■■□ 22.8
VPS26B-204ENST00000527586 ZNF777Q9ULD5 760 aaPredicted RBP12.04□□□□□ -0.48
VPS26B-204ENST00000527586 CDC42BPBQ9Y5S2 1711 aa12.03□□□□□ -0.48
VPS26B-204ENST00000527586 CHIC1Q5VXU3 224 aa12.03□□□□□ -0.48
VPS26B-204ENST00000527586 WASHC2CQ9Y4E1 1318 aa12.03□□□□□ -0.48
VPS26B-204ENST00000527586 CLIP1P30622 1438 aa12.03□□□□□ -0.48
VPS26B-204ENST00000527586 BLMP54132 1417 aaPredicted RBP12.03□□□□□ -0.48
VPS26B-204ENST00000527586 ZNF784Q8NCA9 323 aaPredicted RBP12.02□□□□□ -0.49
VPS26B-204ENST00000527586 PRDM15P57071 1507 aaPredicted RBP12.01□□□□□ -0.49
VPS26B-204ENST00000527586 TRPC5Q9UL62 973 aaPredicted RBP12.01□□□□□ -0.49
VPS26B-204ENST00000527586 EID1Q9Y6B2 187 aa12.01□□□□□ -0.49
VPS26B-204ENST00000527586 SF3B2Q13435 895 aaKnown RBP12□□□□□ -0.49
VPS26B-204ENST00000527586 TIAM1Q13009 1591 aa12□□□□□ -0.49
VPS26B-204ENST00000527586 AHDC1Q5TGY3 1603 aaPredicted RBP12□□□□□ -0.49
VPS26B-204ENST00000527586 USP21Q9UK80 565 aa11.99□□□□□ -0.49
VPS26B-204ENST00000527586 BCL9LQ86UU0 1499 aa11.99□□□□□ -0.49
VPS26B-204ENST00000527586 DIP2AQ14689 1571 aa11.98□□□□□ -0.49
VPS26B-204ENST00000527586 NCOA2Q15596 1464 aa11.98□□□□□ -0.49
VPS26B-204ENST00000527586 DCAF8L1A6NGE4 600 aa11.98□□□□□ -0.49
VPS26B-204ENST00000527586 KIF3BO15066 747 aa11.98□□□□□ -0.49
VPS26B-204ENST00000527586 ADAMTS2O95450 1211 aa11.98□□□□□ -0.49
VPS26B-204ENST00000527586 EHMT2Q96KQ7 1210 aa11.98□□□□□ -0.49
VPS26B-204ENST00000527586 PREX2Q70Z35 1606 aa11.97□□□□□ -0.49
VPS26B-204ENST00000527586 ABCC3O15438 1527 aa11.97□□□□□ -0.49
VPS26B-204ENST00000527586 SLC26A8Q96RN1 970 aa11.97□□□□□ -0.49
VPS26B-204ENST00000527586 SYCP2Q9BX26 1530 aa11.96□□□□□ -0.49
VPS26B-204ENST00000527586 ARHGAP23Q9P227 1491 aa11.95□□□□□ -0.5
VPS26B-204ENST00000527586 INO80Q9ULG1 1556 aaPredicted RBP11.95□□□□□ -0.5
VPS26B-204ENST00000527586 NKTRP30414 1462 aaKnown RBP11.95□□□□□ -0.5
VPS26B-204ENST00000527586 DHX29Q7Z478 1369 aaKnown RBP11.93□□□□□ -0.5
VPS26B-204ENST00000527586 SLIT1O75093 1534 aa11.93□□□□□ -0.5
VPS26B-204ENST00000527586 R3HDM1Q15032 1099 aaKnown RBP11.93□□□□□ -0.5
VPS26B-204ENST00000527586 BRINP3Q76B58 766 aa11.93□□□□□ -0.5
VPS26B-204ENST00000527586 C14orf37Q86TY3 774 aa11.92□□□□□ -0.5
VPS26B-204ENST00000527586 LRRC59Q96AG4 307 aaKnown RBP11.92□□□□□ -0.5
VPS26B-204ENST00000527586 ATRNO75882 1429 aa11.92□□□□□ -0.5
VPS26B-204ENST00000527586 SETD5Q9C0A6 1442 aa11.92□□□□□ -0.5
VPS26B-204ENST00000527586 CADPS2Q86UW7 1296 aa11.91□□□□□ -0.5
VPS26B-204ENST00000527586 CEP350Q5VT06 3117 aa11.91□□□□□ -0.5
VPS26B-204ENST00000527586 KDM5AP29375 1690 aaKnown RBP11.91□□□□□ -0.5
VPS26B-204ENST00000527586 SLC34A2O95436 690 aa11.9□□□□□ -0.5
VPS26B-204ENST00000527586 ATF3P18847 181 aa11.9□□□□□ -0.5
VPS26B-204ENST00000527586 PNPLA6Q8IY17 1366 aa11.9□□□□□ -0.5
VPS26B-204ENST00000527586 UBR1Q8IWV7 1749 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms