RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 TEX35Q5T0J7 233 aa9.12□□□□□ -0.95
CTNND1-216ENST00000527467 CFAP44Q96MT7 982 aa9.12□□□□□ -0.95
CTNND1-216ENST00000527467 HMMRO75330 724 aa9.12□□□□□ -0.95
CTNND1-216ENST00000527467 PDE4CQ08493 712 aa9.11□□□□□ -0.95
CTNND1-216ENST00000527467 PROSER2Q86WR7 435 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-216ENST00000527467 GNL2Q13823 731 aaKnown RBP9.11□□□□□ -0.95
CTNND1-216ENST00000527467 CCDC34Q96HJ3 373 aa9.1□□□□□ -0.95
CTNND1-216ENST00000527467 THOC2Q8NI27 1593 aaKnown RBP9.1□□□□□ -0.95
CTNND1-216ENST00000527467 PKD2Q13563 968 aa9.09□□□□□ -0.95
CTNND1-216ENST00000527467 EIF4G3O43432 1585 aaKnown RBP9.09□□□□□ -0.95
CTNND1-216ENST00000527467 IGF1RP08069 1367 aa9.09□□□□□ -0.95
CTNND1-216ENST00000527467 MS4A1P11836 297 aa9.09□□□□□ -0.95
CTNND1-216ENST00000527467 CCDC191Q8NCU4 936 aa9.08□□□□□ -0.96
CTNND1-216ENST00000527467 GZF1Q9H116 711 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-216ENST00000527467 HSP90B1P14625 803 aaKnown RBP9.08□□□□□ -0.96
CTNND1-216ENST00000527467 SUPT16HQ9Y5B9 1047 aaKnown RBP9.08□□□□□ -0.96
CTNND1-216ENST00000527467 DISP3Q9P2K9 1392 aa9.08□□□□□ -0.96
CTNND1-216ENST00000527467 CCDC70Q6NSX1 233 aa9.08□□□□□ -0.96
CTNND1-216ENST00000527467 MIER1Q8N108 512 aa9.08□□□□□ -0.96
CTNND1-216ENST00000527467 PKNOX2Q96KN3 472 aa9.08□□□□□ -0.96
CTNND1-216ENST00000527467 UHRF1BP1Q6BDS2 1440 aa9.08□□□□□ -0.96
CTNND1-216ENST00000527467 ASXL2Q76L83 1435 aa9.08□□□□□ -0.96
CTNND1-216ENST00000527467 CHIC2Q9UKJ5 165 aa9.07□□□□□ -0.96
CTNND1-216ENST00000527467 OS9Q13438 667 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-216ENST00000527467 CUL7Q14999 1698 aa9.06□□□□□ -0.96
CTNND1-216ENST00000527467 ANKRD30AQ9BXX3 1397 aa9.06□□□□□ -0.96
CTNND1-216ENST00000527467 NEFHP12036 1026 aa9.06□□□□□ -0.96
CTNND1-216ENST00000527467 CALD1Q05682 793 aaKnown RBP9.06□□□□□ -0.96
CTNND1-216ENST00000527467 SPRYD3Q8NCJ5 442 aa9.06□□□□□ -0.96
CTNND1-216ENST00000527467 RDXP35241 583 aaKnown RBP9.05□□□□□ -0.96
CTNND1-216ENST00000527467 CFAP53Q96M91 514 aa9.05□□□□□ -0.96
CTNND1-216ENST00000527467 MAP7D2Q96T17 732 aa9.05□□□□□ -0.96
CTNND1-216ENST00000527467 CNTLNQ9NXG0 1405 aa9.05□□□□□ -0.96
CTNND1-216ENST00000527467 ARHGAP5Q13017 1502 aa9.05□□□□□ -0.96
CTNND1-216ENST00000527467 PRDM2Q13029 1718 aa9.05□□□□□ -0.96
CTNND1-216ENST00000527467 TOP2BQ02880 1626 aa9.05□□□□□ -0.96
CTNND1-216ENST00000527467 FBXO41Q8TF61 875 aa9.05□□□□□ -0.96
CTNND1-216ENST00000527467 LMTK3Q96Q04 1460 aa9.05□□□□□ -0.96
CTNND1-216ENST00000527467 PLEKHG5O94827 1062 aa9.04□□□□□ -0.96
CTNND1-216ENST00000527467 CDR1P51861 262 aa9.04□□□□□ -0.96
CTNND1-216ENST00000527467 GOLGA2Q08379 1002 aa9.04□□□□□ -0.96
CTNND1-216ENST00000527467 CSPP1Q1MSJ5 1256 aa9.03□□□□□ -0.96
CTNND1-216ENST00000527467 CCAR2Q8N163 923 aaKnown RBP9.03□□□□□ -0.96
CTNND1-216ENST00000527467 NGLY1Q96IV0 654 aa9.03□□□□□ -0.96
CTNND1-216ENST00000527467 SCAPERQ9BY12 1400 aa9.03□□□□□ -0.96
CTNND1-216ENST00000527467 IQGAP2Q13576 1575 aa9.03□□□□□ -0.96
CTNND1-216ENST00000527467 PSME1Q06323 249 aa9.03□□□□□ -0.96
CTNND1-216ENST00000527467 PHF14O94880 888 aa9.02□□□□□ -0.96
CTNND1-216ENST00000527467 RAPGEF3O95398 923 aa9.02□□□□□ -0.96
CTNND1-216ENST00000527467 TXNDC2Q86VQ3 553 aa9.02□□□□□ -0.96
CTNND1-216ENST00000527467 NPHP1O15259 732 aa9.02□□□□□ -0.97
CTNND1-216ENST00000527467 CWC15Q9P013 229 aaKnown RBP9.02□□□□□ -0.97
CTNND1-216ENST00000527467 RBM19Q9Y4C8 960 aaKnown RBP9.02□□□□□ -0.97
CTNND1-216ENST00000527467 FBXO3Q9UK99 471 aa9.02□□□□□ -0.97
CTNND1-216ENST00000527467 KDM6BO15054 1643 aa9.02□□□□□ -0.97
CTNND1-216ENST00000527467 CUX1P39880 1505 aa9.02□□□□□ -0.97
CTNND1-216ENST00000527467 WDR7Q9Y4E6 1490 aa9.02□□□□□ -0.97
CTNND1-216ENST00000527467 CCDC66A2RUB6 948 aa9.01□□□□□ -0.97
CTNND1-216ENST00000527467 NUTM2BA6NNL0 878 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-216ENST00000527467 NUTM2EB1AL46 878 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-216ENST00000527467 NUTM2DQ5VT03 806 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-216ENST00000527467 NUTM2AQ8IVF1 878 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-216ENST00000527467 EVA1CP58658 441 aa9.01□□□□□ -0.97
CTNND1-216ENST00000527467 H0YHG0 523 aa9.01□□□□□ -0.97
CTNND1-216ENST00000527467 HNRNPMP52272 730 aaKnown RBP eCLIP9.01□□□□□ -0.975e-7■■■■□ 21
CTNND1-216ENST00000527467 TMX4Q9H1E5 349 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-216ENST00000527467 PPP1R1BQ9UD71 204 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-216ENST00000527467 CSB-PGBD3P0DP91 1061 aa9□□□□□ -0.97
CTNND1-216ENST00000527467 ISY1Q9ULR0 285 aaKnown RBP9□□□□□ -0.97
CTNND1-216ENST00000527467 ABCC2Q92887 1545 aa9□□□□□ -0.97
CTNND1-216ENST00000527467 DCTN1Q14203 1278 aa9□□□□□ -0.97
CTNND1-216ENST00000527467 TSR1Q2NL82 804 aaKnown RBP9□□□□□ -0.97
CTNND1-216ENST00000527467 FRAT1Q92837 279 aaPredicted RBP9□□□□□ -0.97
CTNND1-216ENST00000527467 ACBD3Q9H3P7 528 aa9□□□□□ -0.97
CTNND1-216ENST00000527467 FAM13BQ9NYF5 915 aa8.99□□□□□ -0.97
CTNND1-216ENST00000527467 KIAA1211Q6ZU35 1233 aa8.99□□□□□ -0.97
CTNND1-216ENST00000527467 PLCD4Q9BRC7 762 aa8.99□□□□□ -0.97
CTNND1-216ENST00000527467 SLKQ9H2G2 1235 aaPredicted RBP8.99□□□□□ -0.97
CTNND1-216ENST00000527467 RIMBP3CA6NJZ7 1639 aa8.99□□□□□ -0.97
CTNND1-216ENST00000527467 RIMBP3BA6NNM3 1639 aa8.99□□□□□ -0.97
CTNND1-216ENST00000527467 RIMBP3Q9UFD9 1639 aa8.99□□□□□ -0.97
CTNND1-216ENST00000527467 EIF4G2P78344 907 aaKnown RBP eCLIP8.99□□□□□ -0.97
CTNND1-216ENST00000527467 HSP90AB3PQ58FF7 597 aa8.99□□□□□ -0.97
CTNND1-216ENST00000527467 AK7Q96M32 723 aa8.99□□□□□ -0.97
CTNND1-216ENST00000527467 RRP7BPQ9NSQ0 103 aa8.98□□□□□ -0.97
CTNND1-216ENST00000527467 B4GALNT3Q6L9W6 998 aa8.98□□□□□ -0.97
CTNND1-216ENST00000527467 NEXNQ0ZGT2 675 aa8.98□□□□□ -0.97
CTNND1-216ENST00000527467 MAPK8IP3Q9UPT6 1336 aa8.98□□□□□ -0.97
CTNND1-216ENST00000527467 FHOD3Q2V2M9 1422 aa8.98□□□□□ -0.97
CTNND1-216ENST00000527467 ADGRL1O94910 1474 aa8.98□□□□□ -0.97
CTNND1-216ENST00000527467 VGFO15240 615 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-216ENST00000527467 NUP160Q12769 1436 aa8.97□□□□□ -0.97
CTNND1-216ENST00000527467 MTERF4Q7Z6M4 381 aaKnown RBP8.97□□□□□ -0.97
CTNND1-216ENST00000527467 RUFY1Q96T51 708 aa8.97□□□□□ -0.97
CTNND1-216ENST00000527467 TIMELESSQ9UNS1 1208 aa8.97□□□□□ -0.97
CTNND1-216ENST00000527467 CERKQ8TCT0 537 aa8.97□□□□□ -0.97
CTNND1-216ENST00000527467 ARGLU1Q9NWB6 273 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-216ENST00000527467 TPM1P09493 284 aa8.97□□□□□ -0.97
CTNND1-216ENST00000527467 CDCA8Q53HL2 280 aa8.97□□□□□ -0.97
CTNND1-216ENST00000527467 HSP90B2PQ58FF3 399 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms