RNA–Protein interactions for RNA: ENST00000526510.5

PPP1CA-204, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best)

Gene PPP1CA, Length 1,677 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-204ENST00000526510 EIF2AK4Q9P2K8 1649 aaKnown RBP28.95■■■□□ 2.23
PPP1CA-204ENST00000526510 MYT1LQ9UL68 1186 aa28.94■■■□□ 2.22
PPP1CA-204ENST00000526510 ANKRD30BQ9BXX2 1392 aa28.93■■■□□ 2.22
PPP1CA-204ENST00000526510 DHX29Q7Z478 1369 aaKnown RBP28.92■■■□□ 2.22
PPP1CA-204ENST00000526510 PKD2Q13563 968 aa28.89■■■□□ 2.21
PPP1CA-204ENST00000526510 DIP2CQ9Y2E4 1556 aa28.88■■■□□ 2.21
PPP1CA-204ENST00000526510 ZMYM4Q5VZL5 1548 aa28.88■■■□□ 2.21
PPP1CA-204ENST00000526510 A2MP01023 1474 aa28.87■■■□□ 2.21
PPP1CA-204ENST00000526510 MROH1Q8NDA8 1641 aa28.86■■■□□ 2.21
PPP1CA-204ENST00000526510 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.85■■■□□ 2.21
PPP1CA-204ENST00000526510 BCORL1Q5H9F3 1711 aa28.84■■■□□ 2.21
PPP1CA-204ENST00000526510 TIMELESSQ9UNS1 1208 aa28.83■■■□□ 2.21
PPP1CA-204ENST00000526510 VWDEQ8N2E2 1590 aa28.82■■■□□ 2.2
PPP1CA-204ENST00000526510 RNF17Q9BXT8 1623 aaKnown RBP28.82■■■□□ 2.2
PPP1CA-204ENST00000526510 PRDM15P57071 1507 aaPredicted RBP28.8■■■□□ 2.2
PPP1CA-204ENST00000526510 YEATS2Q9ULM3 1422 aa28.8■■■□□ 2.2
PPP1CA-204ENST00000526510 RPRD2Q5VT52 1461 aaKnown RBP28.8■■■□□ 2.2
PPP1CA-204ENST00000526510 COL17A1Q9UMD9 1497 aaPredicted RBP28.8■■■□□ 2.2
PPP1CA-204ENST00000526510 KIF3BO15066 747 aa28.78■■■□□ 2.2
PPP1CA-204ENST00000526510 TONSLQ96HA7 1378 aa28.77■■■□□ 2.2
PPP1CA-204ENST00000526510 E9PCH4 1651 aa28.76■■■□□ 2.19
PPP1CA-204ENST00000526510 TET3O43151 1660 aa28.75■■■□□ 2.19
PPP1CA-204ENST00000526510 CEP152O94986 1710 aa28.72■■■□□ 2.19
PPP1CA-204ENST00000526510 PPP1R15AO75807 674 aaPredicted RBP28.7■■■□□ 2.19
PPP1CA-204ENST00000526510 PLA2R1Q13018 1463 aa28.69■■■□□ 2.18
PPP1CA-204ENST00000526510 KANK1Q14678 1352 aa28.67■■■□□ 2.18
PPP1CA-204ENST00000526510 REREQ9P2R6 1566 aa28.65■■■□□ 2.18
PPP1CA-204ENST00000526510 SIGLEC1Q9BZZ2 1709 aa28.64■■■□□ 2.18
PPP1CA-204ENST00000526510 ATP10AO60312 1499 aa28.64■■■□□ 2.18
PPP1CA-204ENST00000526510 LMTK2Q8IWU2 1503 aa28.64■■■□□ 2.18
PPP1CA-204ENST00000526510 SPHKAPQ2M3C7 1700 aa28.64■■■□□ 2.17
PPP1CA-204ENST00000526510 ARHGEF40Q8TER5 1519 aa28.63■■■□□ 2.17
PPP1CA-204ENST00000526510 L3MBTL2Q969R5 705 aa28.61■■■□□ 2.17
PPP1CA-204ENST00000526510 EFCAB6Q5THR3 1501 aa28.61■■■□□ 2.17
PPP1CA-204ENST00000526510 TRHP20396 242 aaPredicted RBP28.61■■■□□ 2.17
PPP1CA-204ENST00000526510 GGT6Q6P531 493 aa28.57■■■□□ 2.16
PPP1CA-204ENST00000526510 ABCC3O15438 1527 aa28.56■■■□□ 2.16
PPP1CA-204ENST00000526510 CCDC144AA2RUR9 1427 aa28.55■■■□□ 2.16
PPP1CA-204ENST00000526510 TRPM2O94759 1503 aa28.55■■■□□ 2.16
PPP1CA-204ENST00000526510 ZNF316A6NFI3 1004 aaPredicted RBP28.54■■■□□ 2.16
PPP1CA-204ENST00000526510 AGLP35573 1532 aa28.54■■■□□ 2.16
PPP1CA-204ENST00000526510 CAMSAP1Q5T5Y3 1602 aa28.54■■■□□ 2.16
PPP1CA-204ENST00000526510 PTPRTO14522 1441 aa28.54■■■□□ 2.16
PPP1CA-204ENST00000526510 ZC3H13Q5T200 1668 aaKnown RBP28.54■■■□□ 2.16
PPP1CA-204ENST00000526510 CFAP65Q6ZU64 1925 aaKnown RBP28.53■■■□□ 2.16
PPP1CA-204ENST00000526510 CLTCL1P53675 1640 aa28.5■■■□□ 2.15
PPP1CA-204ENST00000526510 WASHC2CQ9Y4E1 1318 aa28.46■■■□□ 2.15
PPP1CA-204ENST00000526510 NPATQ14207 1427 aa28.45■■■□□ 2.14
PPP1CA-204ENST00000526510 NBPF8Q3BBV2 869 aa28.42■■■□□ 2.14
PPP1CA-204ENST00000526510 UGGT1Q9NYU2 1555 aa28.41■■■□□ 2.14
PPP1CA-204ENST00000526510 KIF1BO60333 1816 aa28.39■■■□□ 2.13
PPP1CA-204ENST00000526510 SPATA31E1Q6ZUB1 1445 aa28.39■■■□□ 2.13
PPP1CA-204ENST00000526510 CLTCQ00610 1675 aaKnown RBP28.38■■■□□ 2.13
PPP1CA-204ENST00000526510 ARHGAP31Q2M1Z3 1444 aa28.37■■■□□ 2.13
PPP1CA-204ENST00000526510 UHRF1BP1Q6BDS2 1440 aa28.36■■■□□ 2.13
PPP1CA-204ENST00000526510 MROH2AA6NES4 1674 aa28.33■■■□□ 2.13
PPP1CA-204ENST00000526510 PREX1Q8TCU6 1659 aa28.33■■■□□ 2.13
PPP1CA-204ENST00000526510 RGL3Q3MIN7 710 aa28.32■■■□□ 2.12
PPP1CA-204ENST00000526510 SYNMO15061 1565 aa28.32■■■□□ 2.12
PPP1CA-204ENST00000526510 NEURL4Q96JN8 1562 aa28.32■■■□□ 2.12
PPP1CA-204ENST00000526510 NOS1P29475 1434 aa28.32■■■□□ 2.12
PPP1CA-204ENST00000526510 DCAF11Q8TEB1 546 aa28.32■■■□□ 2.12
PPP1CA-204ENST00000526510 CNTLNQ9NXG0 1405 aa28.31■■■□□ 2.12
PPP1CA-204ENST00000526510 PIK3C2BO00750 1634 aa28.3■■■□□ 2.12
PPP1CA-204ENST00000526510 PPP6R1Q9UPN7 881 aa28.29■■■□□ 2.12
PPP1CA-204ENST00000526510 KDM2AQ9Y2K7 1162 aa28.29■■■□□ 2.12
PPP1CA-204ENST00000526510 MLECQ14165 292 aa28.26■■■□□ 2.12
PPP1CA-204ENST00000526510 IFT172Q9UG01 1749 aa28.26■■■□□ 2.11
PPP1CA-204ENST00000526510 TRPM1Q7Z4N2 1603 aa28.26■■■□□ 2.11
PPP1CA-204ENST00000526510 ZNF326Q5BKZ1 582 aaKnown RBP28.26■■■□□ 2.11
PPP1CA-204ENST00000526510 RALGAPBQ86X10 1494 aa28.24■■■□□ 2.11
PPP1CA-204ENST00000526510 PRAG1Q86YV5 1406 aa28.24■■■□□ 2.11
PPP1CA-204ENST00000526510 ADGRB3O60242 1522 aa28.23■■■□□ 2.11
PPP1CA-204ENST00000526510 HIRIP3Q9BW71 556 aaPredicted RBP28.23■■■□□ 2.11
PPP1CA-204ENST00000526510 MADDQ8WXG6 1647 aa28.2■■■□□ 2.1
PPP1CA-204ENST00000526510 DIEXFQ68CQ4 756 aaKnown RBP28.19■■■□□ 2.1
PPP1CA-204ENST00000526510 ARID4BQ4LE39 1312 aaPredicted RBP28.19■■■□□ 2.1
PPP1CA-204ENST00000526510 ERVK-7P63135 1459 aa28.18■■■□□ 2.1
PPP1CA-204ENST00000526510 MYO5BQ9ULV0 1848 aa28.18■■■□□ 2.1
PPP1CA-204ENST00000526510 PPLO60437 1756 aa28.16■■■□□ 2.1
PPP1CA-204ENST00000526510 HSPA5P11021 654 aaKnown RBP28.16■■■□□ 2.1
PPP1CA-204ENST00000526510 FBXO31Q5XUX0 539 aaPredicted RBP28.15■■■□□ 2.1
PPP1CA-204ENST00000526510 SPATA31D1Q6ZQQ2 1576 aa28.14■■■□□ 2.1
PPP1CA-204ENST00000526510 EIF4G2P78344 907 aaKnown RBP eCLIP28.13■■■□□ 2.09
PPP1CA-204ENST00000526510 TMEM131LA2VDJ0 1609 aa28.1■■■□□ 2.09
PPP1CA-204ENST00000526510 FER1L4A9Z1Z3 1794 aa28.1■■■□□ 2.09
PPP1CA-204ENST00000526510 MYOM2P54296 1465 aa28.09■■■□□ 2.09
PPP1CA-204ENST00000526510 LAMC1P11047 1609 aa28.09■■■□□ 2.09
PPP1CA-204ENST00000526510 IDI1Q13907 227 aa28.09■■■□□ 2.09
PPP1CA-204ENST00000526510 ZMYM3Q14202 1370 aa28.09■■■□□ 2.09
PPP1CA-204ENST00000526510 STAC3Q96MF2 364 aa28.07■■■□□ 2.08
PPP1CA-204ENST00000526510 SLC52A1Q9NWF4 448 aa28.07■■■□□ 2.08
PPP1CA-204ENST00000526510 CHGAP10645 457 aaKnown RBP28.07■■■□□ 2.08
PPP1CA-204ENST00000526510 KIAA1210Q9ULL0 1709 aa28.06■■■□□ 2.08
PPP1CA-204ENST00000526510 ESF1Q9H501 851 aaKnown RBP28.06■■■□□ 2.08
PPP1CA-204ENST00000526510 POLR1AO95602 1720 aaPredicted RBP28.05■■■□□ 2.08
PPP1CA-204ENST00000526510 ROCK2O75116 1388 aaKnown RBP28.05■■■□□ 2.08
PPP1CA-204ENST00000526510 USP47Q96K76 1375 aa28.05■■■□□ 2.08
PPP1CA-204ENST00000526510 GPRASP1Q5JY77 1395 aa28.04■■■□□ 2.08
PPP1CA-204ENST00000526510 NBPF1Q3BBV0 1214 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms