RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 PDIA6Q15084 440 aa11.01□□□□□ -0.65
SVIP-202ENST00000525670 TSHZ2Q9NRE2 1034 aa11□□□□□ -0.65
SVIP-202ENST00000525670 PPP1R3GB7ZBB8 358 aa10.99□□□□□ -0.65
SVIP-202ENST00000525670 BHMG1C9JSJ3 638 aaPredicted RBP10.99□□□□□ -0.65
SVIP-202ENST00000525670 HCSTQ9UBK5 93 aa10.99□□□□□ -0.65
SVIP-202ENST00000525670 DDX12PQ92771 950 aa10.98□□□□□ -0.65
SVIP-202ENST00000525670 C6orf132Q5T0Z8 1188 aa10.97□□□□□ -0.65
SVIP-202ENST00000525670 COL9A1P20849 921 aa10.96□□□□□ -0.65
SVIP-202ENST00000525670 KCTD12Q96CX2 325 aaKnown RBP10.95□□□□□ -0.66
SVIP-202ENST00000525670 RBM33Q96EV2 1170 aaKnown RBP10.94□□□□□ -0.66
SVIP-202ENST00000525670 CCDC180Q9P1Z9 1646 aa10.94□□□□□ -0.66
SVIP-202ENST00000525670 MRPL50Q8N5N7 158 aaKnown RBP10.93□□□□□ -0.66
SVIP-202ENST00000525670 NBR1Q14596 966 aa10.92□□□□□ -0.66
SVIP-202ENST00000525670 NBPF3Q9H094 633 aa10.92□□□□□ -0.66
SVIP-202ENST00000525670 RABGEF1Q9UJ41 708 aa10.92□□□□□ -0.66
SVIP-202ENST00000525670 ONECUT3O60422 494 aaPredicted RBP10.91□□□□□ -0.66
SVIP-202ENST00000525670 PROX2Q3B8N5 592 aa10.91□□□□□ -0.66
SVIP-202ENST00000525670 GOLGA8CPA6NN73 597 aa10.9□□□□□ -0.66
SVIP-202ENST00000525670 EN1Q05925 392 aaPredicted RBP10.9□□□□□ -0.66
SVIP-202ENST00000525670 MAP3K7O43318 606 aa10.88□□□□□ -0.67
SVIP-202ENST00000525670 GRXCR2A6NFK2 248 aa10.87□□□□□ -0.67
SVIP-202ENST00000525670 KIAA1468Q9P260 1216 aa10.87□□□□□ -0.67
SVIP-202ENST00000525670 WNT2BQ93097 391 aa10.86□□□□□ -0.67
SVIP-202ENST00000525670 TSR1Q2NL82 804 aaKnown RBP10.85□□□□□ -0.67
SVIP-202ENST00000525670 ARHGEF1Q92888 912 aaKnown RBP10.85□□□□□ -0.67
SVIP-202ENST00000525670 TRIM6-TRIM34B2RNG4 842 aa10.84□□□□□ -0.67
SVIP-202ENST00000525670 PTPN5P54829 565 aa10.84□□□□□ -0.67
SVIP-202ENST00000525670 PLCB2Q00722 1185 aa10.84□□□□□ -0.67
SVIP-202ENST00000525670 THSD4Q6ZMP0 1018 aa10.84□□□□□ -0.67
SVIP-202ENST00000525670 LAPTM4BQ86VI4 370 aa10.84□□□□□ -0.67
SVIP-202ENST00000525670 OSBPP22059 807 aa10.83□□□□□ -0.68
SVIP-202ENST00000525670 PRIM1P49642 420 aaKnown RBP10.82□□□□□ -0.68
SVIP-202ENST00000525670 PLA2G2EQ9NZK7 142 aa10.82□□□□□ -0.68
SVIP-202ENST00000525670 KCNV2Q8TDN2 545 aa10.81□□□□□ -0.68
SVIP-202ENST00000525670 CERKQ8TCT0 537 aa10.8□□□□□ -0.68
SVIP-202ENST00000525670 PACS2Q86VP3 889 aa10.79□□□□□ -0.68
SVIP-202ENST00000525670 ANKK1Q8NFD2 765 aa10.79□□□□□ -0.68
SVIP-202ENST00000525670 ABCC9O60706 1549 aa10.79□□□□□ -0.68
SVIP-202ENST00000525670 ZFRQ96KR1 1074 aaKnown RBP10.78□□□□□ -0.68
SVIP-202ENST00000525670 PRSS12P56730 875 aa10.77□□□□□ -0.69
SVIP-202ENST00000525670 SEPT9Q9UHD8 586 aaPredicted RBP10.77□□□□□ -0.69
SVIP-202ENST00000525670 TSKSQ9UJT2 592 aa10.77□□□□□ -0.69
SVIP-202ENST00000525670 FAM98CQ17RN3 349 aaKnown RBP10.76□□□□□ -0.69
SVIP-202ENST00000525670 CDCA7LQ96GN5 454 aa10.76□□□□□ -0.69
SVIP-202ENST00000525670 P3H3Q8IVL6 736 aa10.75□□□□□ -0.69
SVIP-202ENST00000525670 SOWAHBA6NEL2 793 aa10.74□□□□□ -0.69
SVIP-202ENST00000525670 MLLT3P42568 568 aaPredicted RBP10.72□□□□□ -0.69
SVIP-202ENST00000525670 BCAMP50895 628 aa10.72□□□□□ -0.69
SVIP-202ENST00000525670 CDHR5Q9HBB8 845 aa10.72□□□□□ -0.69
SVIP-202ENST00000525670 FAM198AQ9UFP1 575 aa10.71□□□□□ -0.69
SVIP-202ENST00000525670 NPDC1Q9NQX5 325 aaPredicted RBP10.7□□□□□ -0.7
SVIP-202ENST00000525670 RBM27Q9P2N5 1060 aaKnown RBP10.7□□□□□ -0.7
SVIP-202ENST00000525670 NYAP1Q6ZVC0 841 aa10.68□□□□□ -0.7
SVIP-202ENST00000525670 TATDN2Q93075 761 aa10.68□□□□□ -0.7
SVIP-202ENST00000525670 LRCH3Q96II8 777 aa10.68□□□□□ -0.7
SVIP-202ENST00000525670 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.68□□□□□ -0.7
SVIP-202ENST00000525670 NBPF26B4DH59 902 aa10.67□□□□□ -0.7
SVIP-202ENST00000525670 IFFO2Q5TF58 517 aa10.67□□□□□ -0.7
SVIP-202ENST00000525670 SMAPO00193 183 aa10.66□□□□□ -0.7
SVIP-202ENST00000525670 HAP1P54257 671 aaPredicted RBP10.66□□□□□ -0.7
SVIP-202ENST00000525670 PNMA3Q9UL41 463 aa10.66□□□□□ -0.7
SVIP-202ENST00000525670 C3orf80F5H4A9 247 aa10.65□□□□□ -0.7
SVIP-202ENST00000525670 TTC13Q8NBP0 860 aa10.65□□□□□ -0.7
SVIP-202ENST00000525670 WBP1LQ9NX94 342 aa10.65□□□□□ -0.7
SVIP-202ENST00000525670 TSR3Q9UJK0 312 aaKnown RBP10.65□□□□□ -0.7
SVIP-202ENST00000525670 SEMA3EO15041 775 aa10.63□□□□□ -0.71
SVIP-202ENST00000525670 PADI6Q6TGC4 694 aa10.63□□□□□ -0.71
SVIP-202ENST00000525670 NUDT18Q6ZVK8 323 aa10.63□□□□□ -0.71
SVIP-202ENST00000525670 HPS5Q9UPZ3 1129 aa10.63□□□□□ -0.71
SVIP-202ENST00000525670 SAMD7Q7Z3H4 446 aa10.61□□□□□ -0.71
SVIP-202ENST00000525670 HDGFP51858 240 aaKnown RBP10.6□□□□□ -0.71
SVIP-202ENST00000525670 PPP4CP60510 307 aa10.6□□□□□ -0.71
SVIP-202ENST00000525670 PTGDRQ13258 359 aa10.6□□□□□ -0.71
SVIP-202ENST00000525670 ITGBL1O95965 494 aaPredicted RBP10.59□□□□□ -0.71
SVIP-202ENST00000525670 NUTM2FA1L443 756 aa10.57□□□□□ -0.72
SVIP-202ENST00000525670 KDM2AQ9Y2K7 1162 aa10.57□□□□□ -0.72
SVIP-202ENST00000525670 TESPA1A2RU30 521 aaPredicted RBP10.56□□□□□ -0.72
SVIP-202ENST00000525670 EYA1Q99502 592 aa10.56□□□□□ -0.72
SVIP-202ENST00000525670 SMYD5Q6GMV2 418 aa10.55□□□□□ -0.72
SVIP-202ENST00000525670 A0A0G2JS52 829 aa10.54□□□□□ -0.72
SVIP-202ENST00000525670 FCHSD2O94868 740 aa10.53□□□□□ -0.72
SVIP-202ENST00000525670 KCNC4Q03721 635 aa10.53□□□□□ -0.72
SVIP-202ENST00000525670 RGS20O76081 388 aa10.52□□□□□ -0.73
SVIP-202ENST00000525670 SWT1Q5T5J6 900 aaKnown RBP10.51□□□□□ -0.73
SVIP-202ENST00000525670 VSIG10Q8N0Z9 540 aa10.51□□□□□ -0.73
SVIP-202ENST00000525670 SLF2Q8IX21 1173 aa10.5□□□□□ -0.73
SVIP-202ENST00000525670 RBM46Q8TBY0 533 aaKnown RBP10.5□□□□□ -0.73
SVIP-202ENST00000525670 NECTIN2Q92692 538 aa10.5□□□□□ -0.73
SVIP-202ENST00000525670 RNF40O75150 1001 aa10.49□□□□□ -0.73
SVIP-202ENST00000525670 ADGRG1Q9Y653 693 aa10.49□□□□□ -0.73
SVIP-202ENST00000525670 SLC4A3P48751 1232 aa10.48□□□□□ -0.73
SVIP-202ENST00000525670 RBM26Q5T8P6 1007 aaKnown RBP10.48□□□□□ -0.73
SVIP-202ENST00000525670 DNAJB2P25686 324 aa10.46□□□□□ -0.73
SVIP-202ENST00000525670 HIC1Q14526 733 aa10.46□□□□□ -0.73
SVIP-202ENST00000525670 TJAP1Q5JTD0 557 aa10.46□□□□□ -0.73
SVIP-202ENST00000525670 APLP1P51693 650 aa10.45□□□□□ -0.74
SVIP-202ENST00000525670 FAM161AQ3B820 660 aa10.44□□□□□ -0.74
SVIP-202ENST00000525670 RCCD1A6NED2 376 aa10.43□□□□□ -0.74
SVIP-202ENST00000525670 MTRQ99707 1265 aa10.43□□□□□ -0.74
SVIP-202ENST00000525670 OATP04181 439 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms