RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 OS9Q13438 667 aaPredicted RBP22.02■■□□□ 1.12
BEST1-203ENST00000524877 TXNDC2Q86VQ3 553 aa22.01■■□□□ 1.11
BEST1-203ENST00000524877 DHX57Q6P158 1386 aaKnown RBP22.01■■□□□ 1.11
BEST1-203ENST00000524877 CHMP4AQ9BY43 222 aa22.01■■□□□ 1.11
BEST1-203ENST00000524877 U2AF1L5P0DN76 240 aaPredicted RBP22.01■■□□□ 1.11
BEST1-203ENST00000524877 U2AF1Q01081 240 aaKnown RBP eCLIP22.01■■□□□ 1.11
BEST1-203ENST00000524877 STAC3Q96MF2 364 aa22.01■■□□□ 1.11
BEST1-203ENST00000524877 CDK11BP21127 795 aaKnown RBP22.01■■□□□ 1.11
BEST1-203ENST00000524877 LTV1Q96GA3 475 aaPredicted RBP22■■□□□ 1.11
BEST1-203ENST00000524877 COG3Q96JB2 828 aa22■■□□□ 1.11
BEST1-203ENST00000524877 ZNF330Q9Y3S2 320 aaPredicted RBP21.98■■□□□ 1.11
BEST1-203ENST00000524877 SENP3-EIF4A1A0A087X0R7 540 aa21.98■■□□□ 1.11
BEST1-203ENST00000524877 RALBP1Q15311 655 aa21.98■■□□□ 1.11
BEST1-203ENST00000524877 C9orf84Q5VXU9 1444 aa21.97■■□□□ 1.11
BEST1-203ENST00000524877 ARAP1Q96P48 1450 aa21.96■■□□□ 1.11
BEST1-203ENST00000524877 PROSER2Q86WR7 435 aaPredicted RBP21.96■■□□□ 1.11
BEST1-203ENST00000524877 PHLDB1Q86UU1 1377 aa21.96■■□□□ 1.11
BEST1-203ENST00000524877 CASC1Q6TDU7 716 aa21.95■■□□□ 1.1
BEST1-203ENST00000524877 ANKLE2Q86XL3 938 aa21.95■■□□□ 1.1
BEST1-203ENST00000524877 FRAT1Q92837 279 aaPredicted RBP21.95■■□□□ 1.1
BEST1-203ENST00000524877 MIA2Q96PC5 1412 aa21.93■■□□□ 1.1
BEST1-203ENST00000524877 KIF14Q15058 1648 aa21.91■■□□□ 1.1
BEST1-203ENST00000524877 RRBP1Q9P2E9 1410 aaKnown RBP21.91■■□□□ 1.1
BEST1-203ENST00000524877 PLB1Q6P1J6 1458 aa21.91■■□□□ 1.1
BEST1-203ENST00000524877 EPRSP07814 1512 aaKnown RBP21.91■■□□□ 1.1
BEST1-203ENST00000524877 SUPT6HQ7KZ85 1726 aaKnown RBP21.9■■□□□ 1.1
BEST1-203ENST00000524877 BIVM-ERCC5R4GMW8 1640 aa21.89■■□□□ 1.1
BEST1-203ENST00000524877 CDK13Q14004 1512 aaKnown RBP21.88■■□□□ 1.09
BEST1-203ENST00000524877 CGNL1Q0VF96 1302 aa21.88■■□□□ 1.09
BEST1-203ENST00000524877 LMOD3Q0VAK6 560 aa21.88■■□□□ 1.09
BEST1-203ENST00000524877 ADGRL1O94910 1474 aa21.87■■□□□ 1.09
BEST1-203ENST00000524877 C1orf141Q5JVX7 400 aa21.87■■□□□ 1.09
BEST1-203ENST00000524877 RTN4Q9NQC3 1192 aaKnown RBP21.86■■□□□ 1.09
BEST1-203ENST00000524877 SLC52A1Q9NWF4 448 aa21.85■■□□□ 1.09
BEST1-203ENST00000524877 PHF23Q9BUL5 403 aaPredicted RBP21.85■■□□□ 1.09
BEST1-203ENST00000524877 AKNAQ7Z591 1439 aa21.84■■□□□ 1.09
BEST1-203ENST00000524877 NCLP19338 710 aaKnown RBP21.84■■□□□ 1.09
BEST1-203ENST00000524877 TEX14Q8IWB6 1497 aa21.84■■□□□ 1.09
BEST1-203ENST00000524877 CENPJQ9HC77 1338 aaPredicted RBP21.84■■□□□ 1.09
BEST1-203ENST00000524877 ARHGEF11O15085 1522 aa21.83■■□□□ 1.09
BEST1-203ENST00000524877 GPRASP1Q5JY77 1395 aa21.83■■□□□ 1.09
BEST1-203ENST00000524877 ST20-MTHFSA0A0A6YYL1 179 aa21.83■■□□□ 1.08
BEST1-203ENST00000524877 KIF21AQ7Z4S6 1674 aa21.82■■□□□ 1.08
BEST1-203ENST00000524877 ERICH6BQ5W0A0 696 aa21.82■■□□□ 1.08
BEST1-203ENST00000524877 IRX6P78412 446 aaPredicted RBP21.82■■□□□ 1.08
BEST1-203ENST00000524877 STK31Q9BXU1 1019 aa21.82■■□□□ 1.08
BEST1-203ENST00000524877 DENND4BO75064 1496 aaPredicted RBP21.81■■□□□ 1.08
BEST1-203ENST00000524877 IPO8O15397 1037 aaKnown RBP21.79■■□□□ 1.08
BEST1-203ENST00000524877 TRIM44Q96DX7 344 aaPredicted RBP21.78■■□□□ 1.08
BEST1-203ENST00000524877 ESCO1Q5FWF5 840 aa21.78■■□□□ 1.08
BEST1-203ENST00000524877 TIAM1Q13009 1591 aa21.78■■□□□ 1.08
BEST1-203ENST00000524877 CCDC141Q6ZP82 1450 aa21.77■■□□□ 1.08
BEST1-203ENST00000524877 MSH5O43196 834 aa21.77■■□□□ 1.08
BEST1-203ENST00000524877 PANK3Q9H999 370 aa21.76■■□□□ 1.07
BEST1-203ENST00000524877 WDR62O43379 1518 aa21.76■■□□□ 1.07
BEST1-203ENST00000524877 USP47Q96K76 1375 aa21.76■■□□□ 1.07
BEST1-203ENST00000524877 PRKCSHP14314 528 aaPredicted RBP21.75■■□□□ 1.07
BEST1-203ENST00000524877 HFM1A2PYH4 1435 aa21.75■■□□□ 1.07
BEST1-203ENST00000524877 DAPK1P53355 1430 aa21.75■■□□□ 1.07
BEST1-203ENST00000524877 CCER2I3L3R5 266 aa21.74■■□□□ 1.07
BEST1-203ENST00000524877 NAP1L5Q96NT1 182 aaPredicted RBP21.74■■□□□ 1.07
BEST1-203ENST00000524877 G3V3G9 751 aa21.73■■□□□ 1.07
BEST1-203ENST00000524877 DCAF8Q5TAQ9 597 aa21.73■■□□□ 1.07
BEST1-203ENST00000524877 GTF2E1P29083 439 aaPredicted RBP21.73■■□□□ 1.07
BEST1-203ENST00000524877 DMRT2Q9Y5R5 561 aa21.73■■□□□ 1.07
BEST1-203ENST00000524877 HDAC5Q9UQL6 1122 aa21.73■■□□□ 1.07
BEST1-203ENST00000524877 PIP4K2BP78356 416 aa21.72■■□□□ 1.07
BEST1-203ENST00000524877 FANCAO15360 1455 aa21.72■■□□□ 1.07
BEST1-203ENST00000524877 TMEM132EQ6IEE7 984 aa21.71■■□□□ 1.07
BEST1-203ENST00000524877 PCF11O94913 1555 aaKnown RBP21.71■■□□□ 1.07
BEST1-203ENST00000524877 TTC5Q8N0Z6 440 aa21.7■■□□□ 1.07
BEST1-203ENST00000524877 RPGRIP1LQ68CZ1 1315 aa21.7■■□□□ 1.06
BEST1-203ENST00000524877 TAF7LQ5H9L4 462 aa21.7■■□□□ 1.06
BEST1-203ENST00000524877 ASXL2Q76L83 1435 aa21.69■■□□□ 1.06
BEST1-203ENST00000524877 PPP6R1Q9UPN7 881 aa21.68■■□□□ 1.06
BEST1-203ENST00000524877 SYTL4Q96C24 671 aaPredicted RBP21.68■■□□□ 1.06
BEST1-203ENST00000524877 EIF4G3O43432 1585 aaKnown RBP21.67■■□□□ 1.06
BEST1-203ENST00000524877 NLRP13Q86W25 1043 aa21.67■■□□□ 1.06
BEST1-203ENST00000524877 CAMSAP2Q08AD1 1489 aa21.67■■□□□ 1.06
BEST1-203ENST00000524877 TEFQ10587 303 aa21.67■■□□□ 1.06
BEST1-203ENST00000524877 RAPGEF4Q8WZA2 1011 aa21.66■■□□□ 1.06
BEST1-203ENST00000524877 CHMP3Q9Y3E7 222 aa21.66■■□□□ 1.06
BEST1-203ENST00000524877 ADAMTS12P58397 1594 aa21.65■■□□□ 1.06
BEST1-203ENST00000524877 CABP2Q9NPB3 220 aa21.65■■□□□ 1.06
BEST1-203ENST00000524877 ERBINQ96RT1 1412 aa21.64■■□□□ 1.05
BEST1-203ENST00000524877 KCNJ4P48050 445 aa21.64■■□□□ 1.05
BEST1-203ENST00000524877 NLRP6P59044 892 aa21.63■■□□□ 1.05
BEST1-203ENST00000524877 NUTM2BA6NNL0 878 aaPredicted RBP21.63■■□□□ 1.05
BEST1-203ENST00000524877 NUTM2EB1AL46 878 aaPredicted RBP21.63■■□□□ 1.05
BEST1-203ENST00000524877 NUTM2AQ8IVF1 878 aaPredicted RBP21.63■■□□□ 1.05
BEST1-203ENST00000524877 PRAM1Q96QH2 718 aa21.63■■□□□ 1.05
BEST1-203ENST00000524877 ABTB2Q8N961 1025 aa21.62■■□□□ 1.05
BEST1-203ENST00000524877 NLRP2Q9NX02 1062 aa21.62■■□□□ 1.05
BEST1-203ENST00000524877 NUTM2GQ5VZR2 741 aa21.62■■□□□ 1.05
BEST1-203ENST00000524877 SF3B2Q13435 895 aaKnown RBP21.62■■□□□ 1.05
BEST1-203ENST00000524877 CCDC146Q8IYE0 955 aa21.62■■□□□ 1.05
BEST1-203ENST00000524877 SLC26A8Q96RN1 970 aa21.62■■□□□ 1.05
BEST1-203ENST00000524877 KIAA1107Q9UPP5 1409 aa21.62■■□□□ 1.05
BEST1-203ENST00000524877 CFAP70Q5T0N1 1121 aa21.61■■□□□ 1.05
BEST1-203ENST00000524877 DIAPH1O60610 1272 aaKnown RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms