RNA–Protein interactions for RNA: ENST00000524127.5

CTNNA1-241, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-241ENST00000524127 CFDP1Q9UEE9 299 aaPredicted RBP6.8□□□□□ -1.32
CTNNA1-241ENST00000524127 KIAA1107Q9UPP5 1409 aa6.8□□□□□ -1.32
CTNNA1-241ENST00000524127 ATP10AO60312 1499 aa6.79□□□□□ -1.32
CTNNA1-241ENST00000524127 RIMS1Q86UR5 1692 aaKnown RBP6.79□□□□□ -1.32
CTNNA1-241ENST00000524127 ADGBQ8N7X0 1667 aa6.79□□□□□ -1.32
CTNNA1-241ENST00000524127 PLXNC1O60486 1568 aa6.78□□□□□ -1.32
CTNNA1-241ENST00000524127 REREQ9P2R6 1566 aa6.78□□□□□ -1.32
CTNNA1-241ENST00000524127 CNTLNQ9NXG0 1405 aa6.78□□□□□ -1.32
CTNNA1-241ENST00000524127 FER1L4A9Z1Z3 1794 aa6.78□□□□□ -1.32
CTNNA1-241ENST00000524127 ATP7AQ04656 1500 aa6.78□□□□□ -1.32
CTNNA1-241ENST00000524127 HNRNPUQ00839 825 aaKnown RBP eCLIP6.78□□□□□ -1.32
CTNNA1-241ENST00000524127 ZBED9Q6R2W3 1325 aa6.77□□□□□ -1.32
CTNNA1-241ENST00000524127 NAIPQ13075 1403 aa6.77□□□□□ -1.33
CTNNA1-241ENST00000524127 MYOM3Q5VTT5 1437 aa6.77□□□□□ -1.33
CTNNA1-241ENST00000524127 C9orf84Q5VXU9 1444 aa6.77□□□□□ -1.33
CTNNA1-241ENST00000524127 PTPRMP28827 1452 aa6.77□□□□□ -1.33
CTNNA1-241ENST00000524127 ARHGEF5Q12774 1597 aa6.77□□□□□ -1.33
CTNNA1-241ENST00000524127 PLEKHH2Q8IVE3 1493 aa6.76□□□□□ -1.33
CTNNA1-241ENST00000524127 CROCC2H7BZ55 1655 aa6.76□□□□□ -1.33
CTNNA1-241ENST00000524127 AGLP35573 1532 aa6.76□□□□□ -1.33
CTNNA1-241ENST00000524127 NCOA1Q15788 1441 aa6.76□□□□□ -1.33
CTNNA1-241ENST00000524127 TCOF1Q13428 1488 aaKnown RBP6.75□□□□□ -1.33
CTNNA1-241ENST00000524127 CCDC141Q6ZP82 1450 aa6.75□□□□□ -1.33
CTNNA1-241ENST00000524127 DEKP35659 375 aaKnown RBP6.75□□□□□ -1.33
CTNNA1-241ENST00000524127 MLECQ14165 292 aa6.75□□□□□ -1.33
CTNNA1-241ENST00000524127 PTPRKQ15262 1439 aa6.75□□□□□ -1.33
CTNNA1-241ENST00000524127 SMG6Q86US8 1419 aaKnown RBP6.75□□□□□ -1.33
CTNNA1-241ENST00000524127 SPAG9O60271 1321 aaKnown RBP6.75□□□□□ -1.33
CTNNA1-241ENST00000524127 RNF123Q5XPI4 1314 aa6.75□□□□□ -1.33
CTNNA1-241ENST00000524127 WASHC2AQ641Q2 1341 aa6.75□□□□□ -1.33
CTNNA1-241ENST00000524127 GCC2Q8IWJ2 1684 aa6.74□□□□□ -1.33
CTNNA1-241ENST00000524127 MAST1Q9Y2H9 1570 aa6.74□□□□□ -1.33
CTNNA1-241ENST00000524127 EIF4G2P78344 907 aaKnown RBP eCLIP6.74□□□□□ -1.33
CTNNA1-241ENST00000524127 NOP58Q9Y2X3 529 aaKnown RBP6.74□□□□□ -1.33
CTNNA1-241ENST00000524127 ABCC5O15440 1437 aa6.74□□□□□ -1.33
CTNNA1-241ENST00000524127 MIA2Q96PC5 1412 aa6.74□□□□□ -1.33
CTNNA1-241ENST00000524127 C3P01024 1663 aa6.74□□□□□ -1.33
CTNNA1-241ENST00000524127 ARID4BQ4LE39 1312 aaPredicted RBP6.74□□□□□ -1.33
CTNNA1-241ENST00000524127 A2MP01023 1474 aa6.73□□□□□ -1.33
CTNNA1-241ENST00000524127 DNMT1P26358 1616 aaKnown RBP6.73□□□□□ -1.33
CTNNA1-241ENST00000524127 CCDC7Q96M83 1385 aa6.73□□□□□ -1.33
CTNNA1-241ENST00000524127 HSPA5P11021 654 aaKnown RBP6.73□□□□□ -1.33
CTNNA1-241ENST00000524127 POTEHQ6S545 545 aa6.73□□□□□ -1.33
CTNNA1-241ENST00000524127 RTEL1-TNFRSF6BF6WH68 1400 aa6.73□□□□□ -1.33
CTNNA1-241ENST00000524127 MROH1Q8NDA8 1641 aa6.72□□□□□ -1.33
CTNNA1-241ENST00000524127 CEBPAP49715 358 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-241ENST00000524127 HIRIP3Q9BW71 556 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-241ENST00000524127 PRKRIP1Q9H875 184 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-241ENST00000524127 POLR1AO95602 1720 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-241ENST00000524127 SETD1BQ9UPS6 1966 aaKnown RBP6.71□□□□□ -1.33
CTNNA1-241ENST00000524127 CLTCQ00610 1675 aaKnown RBP6.71□□□□□ -1.33
CTNNA1-241ENST00000524127 DAPK1P53355 1430 aa6.71□□□□□ -1.34
CTNNA1-241ENST00000524127 CFAP65Q6ZU64 1925 aaKnown RBP6.71□□□□□ -1.34
CTNNA1-241ENST00000524127 LMTK3Q96Q04 1460 aa6.71□□□□□ -1.34
CTNNA1-241ENST00000524127 DHX29Q7Z478 1369 aaKnown RBP6.7□□□□□ -1.34
CTNNA1-241ENST00000524127 IPO9Q96P70 1041 aaKnown RBP6.7□□□□□ -1.34
CTNNA1-241ENST00000524127 RNF17Q9BXT8 1623 aaKnown RBP6.69□□□□□ -1.34
CTNNA1-241ENST00000524127 SPATA31E1Q6ZUB1 1445 aa6.69□□□□□ -1.34
CTNNA1-241ENST00000524127 MROH2AA6NES4 1674 aa6.69□□□□□ -1.34
CTNNA1-241ENST00000524127 SHANK2Q9UPX8 1470 aa6.69□□□□□ -1.34
CTNNA1-241ENST00000524127 ANP32AP39687 249 aaKnown RBP6.69□□□□□ -1.34
CTNNA1-241ENST00000524127 ROCK1Q13464 1354 aa6.69□□□□□ -1.34
CTNNA1-241ENST00000524127 CEP152O94986 1710 aa6.68□□□□□ -1.34
CTNNA1-241ENST00000524127 IRX6P78412 446 aaPredicted RBP6.68□□□□□ -1.34
CTNNA1-241ENST00000524127 PLPPR3Q6T4P5 718 aa6.68□□□□□ -1.34
CTNNA1-241ENST00000524127 MRS2Q9HD23 443 aa6.68□□□□□ -1.34
CTNNA1-241ENST00000524127 USP35Q9P2H5 1018 aa6.68□□□□□ -1.34
CTNNA1-241ENST00000524127 NUDCQ9Y266 331 aa6.68□□□□□ -1.34
CTNNA1-241ENST00000524127 ADGRL2O95490 1459 aa6.67□□□□□ -1.34
CTNNA1-241ENST00000524127 RPRD2Q5VT52 1461 aaKnown RBP6.67□□□□□ -1.34
CTNNA1-241ENST00000524127 STRCQ7RTU9 1775 aa6.67□□□□□ -1.34
CTNNA1-241ENST00000524127 RTL5Q5HYW3 569 aaPredicted RBP6.67□□□□□ -1.34
CTNNA1-241ENST00000524127 B4GALNT3Q6L9W6 998 aa6.67□□□□□ -1.34
CTNNA1-241ENST00000524127 CHIC2Q9UKJ5 165 aa6.67□□□□□ -1.34
CTNNA1-241ENST00000524127 DEPDC5O75140 1603 aa6.67□□□□□ -1.34
CTNNA1-241ENST00000524127 PREX1Q8TCU6 1659 aa6.67□□□□□ -1.34
CTNNA1-241ENST00000524127 EIF2AK4Q9P2K8 1649 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-241ENST00000524127 KIF3BO15066 747 aa6.66□□□□□ -1.34
CTNNA1-241ENST00000524127 HSPA2P54652 639 aa6.66□□□□□ -1.34
CTNNA1-241ENST00000524127 RSPH4AQ5TD94 716 aa6.66□□□□□ -1.34
CTNNA1-241ENST00000524127 GGT6Q6P531 493 aa6.66□□□□□ -1.34
CTNNA1-241ENST00000524127 ZMYM3Q14202 1370 aa6.66□□□□□ -1.34
CTNNA1-241ENST00000524127 KTN1Q86UP2 1357 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-241ENST00000524127 ANKRD30BQ9BXX2 1392 aa6.66□□□□□ -1.34
CTNNA1-241ENST00000524127 KIF15Q9NS87 1388 aa6.66□□□□□ -1.34
CTNNA1-241ENST00000524127 ABCC3O15438 1527 aa6.66□□□□□ -1.34
CTNNA1-241ENST00000524127 DUOX2Q9NRD8 1548 aa6.66□□□□□ -1.34
CTNNA1-241ENST00000524127 VWDEQ8N2E2 1590 aa6.65□□□□□ -1.34
CTNNA1-241ENST00000524127 TCERG1O14776 1098 aaKnown RBP6.65□□□□□ -1.34
CTNNA1-241ENST00000524127 PAK3O75914 559 aaPredicted RBP6.65□□□□□ -1.34
CTNNA1-241ENST00000524127 CCDC184Q52MB2 194 aa6.65□□□□□ -1.34
CTNNA1-241ENST00000524127 MPHOSPH9Q99550 1183 aa6.65□□□□□ -1.34
CTNNA1-241ENST00000524127 RRP7BPQ9NSQ0 103 aa6.65□□□□□ -1.34
CTNNA1-241ENST00000524127 ZBTB47Q9UFB7 747 aaPredicted RBP6.65□□□□□ -1.34
CTNNA1-241ENST00000524127 ROCK2O75116 1388 aaKnown RBP6.65□□□□□ -1.35
CTNNA1-241ENST00000524127 PRDM15P57071 1507 aaPredicted RBP6.65□□□□□ -1.35
CTNNA1-241ENST00000524127 C11orf95C9JLR9 678 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-241ENST00000524127 TSPY4P0CV99 314 aa6.64□□□□□ -1.35
CTNNA1-241ENST00000524127 TSPY10P0CW01 314 aa6.64□□□□□ -1.35
CTNNA1-241ENST00000524127 MS4A1P11836 297 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms