RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 ADGRL2O95490 1459 aa19.13■□□□□ 0.65
CCNC-216ENST00000523961 ERBINQ96RT1 1412 aa19.1■□□□□ 0.65
CCNC-216ENST00000523961 CEBPAP49715 358 aaPredicted RBP19.1■□□□□ 0.65
CCNC-216ENST00000523961 EIF2AK4Q9P2K8 1649 aaKnown RBP19.1■□□□□ 0.65
CCNC-216ENST00000523961 PTPRKQ15262 1439 aa19.08■□□□□ 0.65
CCNC-216ENST00000523961 ITGAEP38570 1179 aa19.08■□□□□ 0.64
CCNC-216ENST00000523961 FAM135AQ9P2D6 1515 aa19.07■□□□□ 0.64
CCNC-216ENST00000523961 ROCK1Q13464 1354 aa19.06■□□□□ 0.64
CCNC-216ENST00000523961 ZMYM3Q14202 1370 aa19.06■□□□□ 0.64
CCNC-216ENST00000523961 MROH2AA6NES4 1674 aa19.06■□□□□ 0.64
CCNC-216ENST00000523961 RNF17Q9BXT8 1623 aaKnown RBP19.06■□□□□ 0.64
CCNC-216ENST00000523961 WASHC2CQ9Y4E1 1318 aa19.05■□□□□ 0.64
CCNC-216ENST00000523961 CLTCQ00610 1675 aaKnown RBP19.05■□□□□ 0.64
CCNC-216ENST00000523961 C3P01024 1663 aa19.04■□□□□ 0.64
CCNC-216ENST00000523961 KDM5DQ9BY66 1539 aa19.04■□□□□ 0.64
CCNC-216ENST00000523961 ANKRD50Q9ULJ7 1429 aa19.02■□□□□ 0.64
CCNC-216ENST00000523961 NPATQ14207 1427 aa19■□□□□ 0.63
CCNC-216ENST00000523961 MROH1Q8NDA8 1641 aa19■□□□□ 0.63
CCNC-216ENST00000523961 SETD1BQ9UPS6 1966 aaKnown RBP18.99■□□□□ 0.63
CCNC-216ENST00000523961 KANK1Q14678 1352 aa18.98■□□□□ 0.63
CCNC-216ENST00000523961 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.98■□□□□ 0.63
CCNC-216ENST00000523961 ABCC3O15438 1527 aa18.98■□□□□ 0.63
CCNC-216ENST00000523961 PRDM15P57071 1507 aaPredicted RBP18.98■□□□□ 0.63
CCNC-216ENST00000523961 LMTK3Q96Q04 1460 aa18.97■□□□□ 0.63
CCNC-216ENST00000523961 ZC3H13Q5T200 1668 aaKnown RBP18.97■□□□□ 0.63
CCNC-216ENST00000523961 DEPDC5O75140 1603 aa18.96■□□□□ 0.63
CCNC-216ENST00000523961 UHRF1BP1Q6BDS2 1440 aa18.96■□□□□ 0.63
CCNC-216ENST00000523961 PZPP20742 1482 aa18.96■□□□□ 0.63
CCNC-216ENST00000523961 PREX1Q8TCU6 1659 aa18.95■□□□□ 0.62
CCNC-216ENST00000523961 FBXO31Q5XUX0 539 aaPredicted RBP18.91■□□□□ 0.62
CCNC-216ENST00000523961 CEP152O94986 1710 aa18.91■□□□□ 0.62
CCNC-216ENST00000523961 VWDEQ8N2E2 1590 aa18.9■□□□□ 0.62
CCNC-216ENST00000523961 HSPA2P54652 639 aa18.89■□□□□ 0.61
CCNC-216ENST00000523961 TNRQ92752 1358 aa18.89■□□□□ 0.61
CCNC-216ENST00000523961 ARHGAP31Q2M1Z3 1444 aa18.89■□□□□ 0.61
CCNC-216ENST00000523961 LMTK2Q8IWU2 1503 aa18.89■□□□□ 0.61
CCNC-216ENST00000523961 CAMSAP1Q5T5Y3 1602 aa18.89■□□□□ 0.61
CCNC-216ENST00000523961 NAIPQ13075 1403 aa18.88■□□□□ 0.61
CCNC-216ENST00000523961 HFM1A2PYH4 1435 aa18.87■□□□□ 0.61
CCNC-216ENST00000523961 UNC13BO14795 1591 aa18.87■□□□□ 0.61
CCNC-216ENST00000523961 ERVK-7P63135 1459 aa18.85■□□□□ 0.61
CCNC-216ENST00000523961 MYO3AQ8NEV4 1616 aa18.84■□□□□ 0.61
CCNC-216ENST00000523961 SPATA31D1Q6ZQQ2 1576 aa18.84■□□□□ 0.61
CCNC-216ENST00000523961 NUP155O75694 1391 aa18.83■□□□□ 0.61
CCNC-216ENST00000523961 GCC2Q8IWJ2 1684 aa18.83■□□□□ 0.61
CCNC-216ENST00000523961 EFCAB6Q5THR3 1501 aa18.82■□□□□ 0.6
CCNC-216ENST00000523961 A2ML1A8K2U0 1454 aa18.82■□□□□ 0.6
CCNC-216ENST00000523961 NLRP1Q9C000 1473 aa18.82■□□□□ 0.6
CCNC-216ENST00000523961 CEP170BQ9Y4F5 1589 aaPredicted RBP18.81■□□□□ 0.6
CCNC-216ENST00000523961 ZNF142P52746 1687 aaPredicted RBP18.81■□□□□ 0.6
CCNC-216ENST00000523961 TET3O43151 1660 aa18.79■□□□□ 0.6
CCNC-216ENST00000523961 RPRD2Q5VT52 1461 aaKnown RBP18.79■□□□□ 0.6
CCNC-216ENST00000523961 IQGAP3Q86VI3 1631 aa18.79■□□□□ 0.6
CCNC-216ENST00000523961 CFAP65Q6ZU64 1925 aaKnown RBP18.78■□□□□ 0.6
CCNC-216ENST00000523961 NOS1P29475 1434 aa18.75■□□□□ 0.59
CCNC-216ENST00000523961 THEMISQ8N1K5 641 aaPredicted RBP18.75■□□□□ 0.59
CCNC-216ENST00000523961 TRIM52Q96A61 297 aa18.75■□□□□ 0.59
CCNC-216ENST00000523961 UGGT1Q9NYU2 1555 aa18.74■□□□□ 0.59
CCNC-216ENST00000523961 PLA2R1Q13018 1463 aa18.74■□□□□ 0.59
CCNC-216ENST00000523961 DMRT2Q9Y5R5 561 aa18.74■□□□□ 0.59
CCNC-216ENST00000523961 SETD5Q9C0A6 1442 aa18.72■□□□□ 0.59
CCNC-216ENST00000523961 ACIN1Q9UKV3 1341 aaKnown RBP18.72■□□□□ 0.59
CCNC-216ENST00000523961 PKD2Q13563 968 aa18.71■□□□□ 0.59
CCNC-216ENST00000523961 SLC52A1Q9NWF4 448 aa18.71■□□□□ 0.59
CCNC-216ENST00000523961 STRCQ7RTU9 1775 aa18.7■□□□□ 0.58
CCNC-216ENST00000523961 E9PCH4 1651 aa18.7■□□□□ 0.58
CCNC-216ENST00000523961 SYNMO15061 1565 aa18.7■□□□□ 0.58
CCNC-216ENST00000523961 IDI1Q13907 227 aa18.7■□□□□ 0.58
CCNC-216ENST00000523961 STAG3Q9UJ98 1225 aa18.68■□□□□ 0.58
CCNC-216ENST00000523961 NCKAP5LQ9HCH0 1330 aa18.68■□□□□ 0.58
CCNC-216ENST00000523961 PTPRTO14522 1441 aa18.67■□□□□ 0.58
CCNC-216ENST00000523961 ANKLE2Q86XL3 938 aa18.67■□□□□ 0.58
CCNC-216ENST00000523961 SLC4A1APQ9BWU0 796 aaKnown RBP18.67■□□□□ 0.58
CCNC-216ENST00000523961 PIK3C2BO00750 1634 aa18.65■□□□□ 0.58
CCNC-216ENST00000523961 UBR1Q8IWV7 1749 aa18.65■□□□□ 0.58
CCNC-216ENST00000523961 RAB3GAP2Q9H2M9 1393 aa18.64■□□□□ 0.57
CCNC-216ENST00000523961 KDM5AP29375 1690 aaKnown RBP18.63■□□□□ 0.57
CCNC-216ENST00000523961 MSH5O43196 834 aa18.62■□□□□ 0.57
CCNC-216ENST00000523961 ADGRB3O60242 1522 aa18.61■□□□□ 0.57
CCNC-216ENST00000523961 SLIT1O75093 1534 aa18.6■□□□□ 0.57
CCNC-216ENST00000523961 ARHGAP23Q9P227 1491 aa18.6■□□□□ 0.57
CCNC-216ENST00000523961 TMEM2Q9UHN6 1383 aa18.6■□□□□ 0.57
CCNC-216ENST00000523961 HRCP23327 699 aa18.6■□□□□ 0.57
CCNC-216ENST00000523961 MPHOSPH9Q99550 1183 aa18.6■□□□□ 0.57
CCNC-216ENST00000523961 EID1Q9Y6B2 187 aa18.6■□□□□ 0.57
CCNC-216ENST00000523961 PIAS4Q8N2W9 510 aaPredicted RBP18.59■□□□□ 0.57
CCNC-216ENST00000523961 POLR1AO95602 1720 aaPredicted RBP18.59■□□□□ 0.57
CCNC-216ENST00000523961 SPHKAPQ2M3C7 1700 aa18.59■□□□□ 0.57
CCNC-216ENST00000523961 CHGAP10645 457 aaKnown RBP18.58■□□□□ 0.56
CCNC-216ENST00000523961 TXNDC2Q86VQ3 553 aa18.58■□□□□ 0.56
CCNC-216ENST00000523961 MED14O60244 1454 aa18.58■□□□□ 0.56
CCNC-216ENST00000523961 SCAF11Q99590 1463 aaKnown RBP18.58■□□□□ 0.56
CCNC-216ENST00000523961 NEURL4Q96JN8 1562 aa18.57■□□□□ 0.56
CCNC-216ENST00000523961 ADRA2BP18089 450 aa18.57■□□□□ 0.56
CCNC-216ENST00000523961 NPHP4O75161 1426 aaPredicted RBP18.57■□□□□ 0.56
CCNC-216ENST00000523961 TRPM2O94759 1503 aa18.56■□□□□ 0.56
CCNC-216ENST00000523961 LTKP29376 864 aa18.56■□□□□ 0.56
CCNC-216ENST00000523961 TMEM131LA2VDJ0 1609 aa18.55■□□□□ 0.56
CCNC-216ENST00000523961 HDGFP51858 240 aaKnown RBP18.54■□□□□ 0.56
CCNC-216ENST00000523961 RIMS2Q9UQ26 1411 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms