RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 PCDHGA10Q9Y5H3 936 aa9.13□□□□□ -0.95
PCM1-220ENST00000523896 PDIA6Q15084 440 aa9.12□□□□□ -0.95
PCM1-220ENST00000523896 DDX12PQ92771 950 aa9.12□□□□□ -0.95
PCM1-220ENST00000523896 SLC4A5Q9BY07 1137 aa9.1□□□□□ -0.95
PCM1-220ENST00000523896 PPP1R3GB7ZBB8 358 aa9.09□□□□□ -0.95
PCM1-220ENST00000523896 NBR1Q14596 966 aa9.09□□□□□ -0.95
PCM1-220ENST00000523896 VPS9D1Q9Y2B5 631 aa9.09□□□□□ -0.95
PCM1-220ENST00000523896 ARIH1Q9Y4X5 557 aaPredicted RBP9.09□□□□□ -0.95
PCM1-220ENST00000523896 GOLGA8CPA6NN73 597 aa9.08□□□□□ -0.96
PCM1-220ENST00000523896 RBM33Q96EV2 1170 aaKnown RBP9.08□□□□□ -0.96
PCM1-220ENST00000523896 P3H3Q8IVL6 736 aa9.07□□□□□ -0.96
PCM1-220ENST00000523896 ZBED2Q9BTP6 218 aa9.07□□□□□ -0.96
PCM1-220ENST00000523896 NBPF3Q9H094 633 aa9.07□□□□□ -0.96
PCM1-220ENST00000523896 MAP3K7O43318 606 aa9.06□□□□□ -0.96
PCM1-220ENST00000523896 HRO43593 1189 aa9.06□□□□□ -0.96
PCM1-220ENST00000523896 GRXCR2A6NFK2 248 aa9.05□□□□□ -0.96
PCM1-220ENST00000523896 MRPL50Q8N5N7 158 aaKnown RBP9.05□□□□□ -0.96
PCM1-220ENST00000523896 C6orf132Q5T0Z8 1188 aa9.04□□□□□ -0.96
PCM1-220ENST00000523896 EN1Q05925 392 aaPredicted RBP9.03□□□□□ -0.96
PCM1-220ENST00000523896 ARHGEF1Q92888 912 aaKnown RBP9.03□□□□□ -0.96
PCM1-220ENST00000523896 KCTD12Q96CX2 325 aaKnown RBP9.03□□□□□ -0.96
PCM1-220ENST00000523896 HCSTQ9UBK5 93 aa9.03□□□□□ -0.96
PCM1-220ENST00000523896 COL9A1P20849 921 aa9□□□□□ -0.97
PCM1-220ENST00000523896 KCNV2Q8TDN2 545 aa9□□□□□ -0.97
PCM1-220ENST00000523896 RABGEF1Q9UJ41 708 aa9□□□□□ -0.97
PCM1-220ENST00000523896 PROX2Q3B8N5 592 aa8.99□□□□□ -0.97
PCM1-220ENST00000523896 ONECUT3O60422 494 aaPredicted RBP8.98□□□□□ -0.97
PCM1-220ENST00000523896 CERKQ8TCT0 537 aa8.98□□□□□ -0.97
PCM1-220ENST00000523896 WNT2BQ93097 391 aa8.97□□□□□ -0.97
PCM1-220ENST00000523896 TRIM6-TRIM34B2RNG4 842 aa8.96□□□□□ -0.98
PCM1-220ENST00000523896 BHMG1C9JSJ3 638 aaPredicted RBP8.96□□□□□ -0.98
PCM1-220ENST00000523896 TSR1Q2NL82 804 aaKnown RBP8.96□□□□□ -0.98
PCM1-220ENST00000523896 PACS2Q86VP3 889 aa8.96□□□□□ -0.98
PCM1-220ENST00000523896 KIAA1468Q9P260 1216 aa8.96□□□□□ -0.98
PCM1-220ENST00000523896 LAPTM4BQ86VI4 370 aa8.95□□□□□ -0.98
PCM1-220ENST00000523896 ANKK1Q8NFD2 765 aa8.95□□□□□ -0.98
PCM1-220ENST00000523896 PTPN5P54829 565 aa8.94□□□□□ -0.98
PCM1-220ENST00000523896 OSBPP22059 807 aa8.92□□□□□ -0.98
PCM1-220ENST00000523896 THSD4Q6ZMP0 1018 aa8.92□□□□□ -0.98
PCM1-220ENST00000523896 NBPF26B4DH59 902 aa8.9□□□□□ -0.98
PCM1-220ENST00000523896 PRSS12P56730 875 aa8.9□□□□□ -0.98
PCM1-220ENST00000523896 FAM98CQ17RN3 349 aaKnown RBP8.9□□□□□ -0.98
PCM1-220ENST00000523896 CDCA7LQ96GN5 454 aa8.9□□□□□ -0.98
PCM1-220ENST00000523896 SEPT9Q9UHD8 586 aaPredicted RBP8.9□□□□□ -0.98
PCM1-220ENST00000523896 MLLT3P42568 568 aaPredicted RBP8.88□□□□□ -0.99
PCM1-220ENST00000523896 SMYD5Q6GMV2 418 aa8.88□□□□□ -0.99
PCM1-220ENST00000523896 ZFRQ96KR1 1074 aaKnown RBP8.88□□□□□ -0.99
PCM1-220ENST00000523896 PRIM1P49642 420 aaKnown RBP8.87□□□□□ -0.99
PCM1-220ENST00000523896 CDHR5Q9HBB8 845 aa8.87□□□□□ -0.99
PCM1-220ENST00000523896 PLA2G2EQ9NZK7 142 aa8.87□□□□□ -0.99
PCM1-220ENST00000523896 RBM27Q9P2N5 1060 aaKnown RBP8.87□□□□□ -0.99
PCM1-220ENST00000523896 TSKSQ9UJT2 592 aa8.87□□□□□ -0.99
PCM1-220ENST00000523896 LRCH3Q96II8 777 aa8.86□□□□□ -0.99
PCM1-220ENST00000523896 NUTM2FA1L443 756 aa8.85□□□□□ -0.99
PCM1-220ENST00000523896 HDGFP51858 240 aaKnown RBP8.85□□□□□ -0.99
PCM1-220ENST00000523896 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.85□□□□□ -0.99
PCM1-220ENST00000523896 PNMA3Q9UL41 463 aa8.85□□□□□ -0.99
PCM1-220ENST00000523896 SOWAHBA6NEL2 793 aa8.84□□□□□ -0.99
PCM1-220ENST00000523896 SEMA3EO15041 775 aa8.84□□□□□ -0.99
PCM1-220ENST00000523896 BCAMP50895 628 aa8.83□□□□□ -1
PCM1-220ENST00000523896 NYAP1Q6ZVC0 841 aa8.83□□□□□ -1
PCM1-220ENST00000523896 TATDN2Q93075 761 aa8.83□□□□□ -1
PCM1-220ENST00000523896 SLC4A3P48751 1232 aa8.82□□□□□ -1
PCM1-220ENST00000523896 PADI6Q6TGC4 694 aa8.82□□□□□ -1
PCM1-220ENST00000523896 SMAPO00193 183 aa8.81□□□□□ -1
PCM1-220ENST00000523896 TULP1O00294 542 aaPredicted RBP8.81□□□□□ -1
PCM1-220ENST00000523896 NUDT18Q6ZVK8 323 aa8.8□□□□□ -1
PCM1-220ENST00000523896 TSR3Q9UJK0 312 aaKnown RBP8.8□□□□□ -1
PCM1-220ENST00000523896 HPS5Q9UPZ3 1129 aa8.8□□□□□ -1
PCM1-220ENST00000523896 FCHSD2O94868 740 aa8.79□□□□□ -1
PCM1-220ENST00000523896 TPRNQ4KMQ1 711 aa8.79□□□□□ -1
PCM1-220ENST00000523896 RNF40O75150 1001 aa8.78□□□□□ -1
PCM1-220ENST00000523896 PPP4CP60510 307 aa8.78□□□□□ -1
PCM1-220ENST00000523896 NPDC1Q9NQX5 325 aaPredicted RBP8.78□□□□□ -1
PCM1-220ENST00000523896 FAM198AQ9UFP1 575 aa8.78□□□□□ -1
PCM1-220ENST00000523896 TESPA1A2RU30 521 aaPredicted RBP8.77□□□□□ -1.01
PCM1-220ENST00000523896 PRKCSHP14314 528 aaPredicted RBP8.77□□□□□ -1.01
PCM1-220ENST00000523896 PTGDRQ13258 359 aa8.77□□□□□ -1.01
PCM1-220ENST00000523896 SAMD7Q7Z3H4 446 aa8.77□□□□□ -1.01
PCM1-220ENST00000523896 NECTIN2Q92692 538 aa8.77□□□□□ -1.01
PCM1-220ENST00000523896 RBM46Q8TBY0 533 aaKnown RBP8.76□□□□□ -1.01
PCM1-220ENST00000523896 WBP1LQ9NX94 342 aa8.76□□□□□ -1.01
PCM1-220ENST00000523896 TTC13Q8NBP0 860 aa8.75□□□□□ -1.01
PCM1-220ENST00000523896 SLF2Q8IX21 1173 aa8.73□□□□□ -1.01
PCM1-220ENST00000523896 HIC1Q14526 733 aa8.72□□□□□ -1.01
PCM1-220ENST00000523896 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.72□□□□□ -1.01
PCM1-220ENST00000523896 C3orf80F5H4A9 247 aa8.71□□□□□ -1.02
PCM1-220ENST00000523896 RBM26Q5T8P6 1007 aaKnown RBP8.71□□□□□ -1.02
PCM1-220ENST00000523896 LMOD2Q6P5Q4 547 aa8.71□□□□□ -1.02
PCM1-220ENST00000523896 DNAJB2P25686 324 aa8.7□□□□□ -1.02
PCM1-220ENST00000523896 SWT1Q5T5J6 900 aaKnown RBP8.7□□□□□ -1.02
PCM1-220ENST00000523896 IFFO2Q5TF58 517 aa8.7□□□□□ -1.02
PCM1-220ENST00000523896 KCNC4Q03721 635 aa8.69□□□□□ -1.02
PCM1-220ENST00000523896 GPIHBP1Q8IV16 184 aa8.69□□□□□ -1.02
PCM1-220ENST00000523896 OATP04181 439 aa8.68□□□□□ -1.02
PCM1-220ENST00000523896 EYA1Q99502 592 aa8.68□□□□□ -1.02
PCM1-220ENST00000523896 ADGRG1Q9Y653 693 aa8.68□□□□□ -1.02
PCM1-220ENST00000523896 GNPATO15228 680 aa8.67□□□□□ -1.02
PCM1-220ENST00000523896 ITGBL1O95965 494 aaPredicted RBP8.67□□□□□ -1.02
PCM1-220ENST00000523896 PRR14Q9BWN1 585 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms