RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 FHAD1B1AJZ9 1412 aa11.07□□□□□ -0.64
PABPC1-220ENST00000522658 KHSRPQ92945 711 aaKnown RBP eCLIP11.06□□□□□ -0.644e-10■■□□□ 14.4
PABPC1-220ENST00000522658 NUP160Q12769 1436 aa11.06□□□□□ -0.64
PABPC1-220ENST00000522658 TOP2BQ02880 1626 aa11.05□□□□□ -0.64
PABPC1-220ENST00000522658 ERICH3Q5RHP9 1530 aa11.04□□□□□ -0.64
PABPC1-220ENST00000522658 ERCC6L2Q5T890 1561 aa11.04□□□□□ -0.64
PABPC1-220ENST00000522658 BIVM-ERCC5R4GMW8 1640 aa11.04□□□□□ -0.64
PABPC1-220ENST00000522658 HS6ST3Q8IZP7 471 aa11.03□□□□□ -0.64
PABPC1-220ENST00000522658 ZNF316A6NFI3 1004 aaPredicted RBP11.02□□□□□ -0.65
PABPC1-220ENST00000522658 SLC34A2O95436 690 aa11.02□□□□□ -0.65
PABPC1-220ENST00000522658 SHROOM2Q13796 1616 aa11.01□□□□□ -0.65
PABPC1-220ENST00000522658 PRG4Q92954 1404 aaPredicted RBP11.01□□□□□ -0.65
PABPC1-220ENST00000522658 TMC2Q8TDI7 906 aa10.97□□□□□ -0.65
PABPC1-220ENST00000522658 NUDT7P0C024 238 aa10.96□□□□□ -0.65
PABPC1-220ENST00000522658 PCDHGA4Q9Y5G9 962 aa10.96□□□□□ -0.65
PABPC1-220ENST00000522658 RUSC2Q8N2Y8 1516 aa10.95□□□□□ -0.66
PABPC1-220ENST00000522658 JPH4Q96JJ6 628 aa10.95□□□□□ -0.66
PABPC1-220ENST00000522658 KIF13AQ9H1H9 1805 aa10.94□□□□□ -0.66
PABPC1-220ENST00000522658 FAM69CQ0P6D2 419 aa10.94□□□□□ -0.66
PABPC1-220ENST00000522658 MAPKBP1O60336 1514 aa10.91□□□□□ -0.66
PABPC1-220ENST00000522658 KDM4FA0A1W2PPD8 638 aa10.91□□□□□ -0.66
PABPC1-220ENST00000522658 CHGAP10645 457 aaKnown RBP10.91□□□□□ -0.66
PABPC1-220ENST00000522658 NKX1-1Q15270 411 aaPredicted RBP10.91□□□□□ -0.66
PABPC1-220ENST00000522658 LHX6Q9UPM6 363 aa10.91□□□□□ -0.66
PABPC1-220ENST00000522658 ABCC10Q5T3U5 1492 aa10.91□□□□□ -0.66
PABPC1-220ENST00000522658 KDM6BO15054 1643 aa10.91□□□□□ -0.66
PABPC1-220ENST00000522658 FOXK1P85037 733 aa10.9□□□□□ -0.66
PABPC1-220ENST00000522658 POTEEQ6S8J3 1075 aa10.9□□□□□ -0.66
PABPC1-220ENST00000522658 RNF166Q96A37 237 aaPredicted RBP10.9□□□□□ -0.66
PABPC1-220ENST00000522658 DIP2BQ9P265 1576 aa10.9□□□□□ -0.67
PABPC1-220ENST00000522658 CUL7Q14999 1698 aa10.89□□□□□ -0.67
PABPC1-220ENST00000522658 PTCD2Q8WV60 388 aaKnown RBP10.89□□□□□ -0.67
PABPC1-220ENST00000522658 GPHNQ9NQX3 736 aaPredicted RBP10.89□□□□□ -0.67
PABPC1-220ENST00000522658 MYT1LQ9UL68 1186 aa10.89□□□□□ -0.67
PABPC1-220ENST00000522658 ADCY10Q96PN6 1610 aa10.87□□□□□ -0.67
PABPC1-220ENST00000522658 KIF27Q86VH2 1401 aa10.87□□□□□ -0.67
PABPC1-220ENST00000522658 LSM11P83369 360 aaKnown RBP eCLIP10.87□□□□□ -0.67
PABPC1-220ENST00000522658 KIAA0586Q9BVV6 1533 aa10.87□□□□□ -0.67
PABPC1-220ENST00000522658 TTBK1Q5TCY1 1321 aaPredicted RBP10.86□□□□□ -0.67
PABPC1-220ENST00000522658 PTGER2P43116 358 aa10.86□□□□□ -0.67
PABPC1-220ENST00000522658 CARMIL2Q6F5E8 1435 aa10.85□□□□□ -0.67
PABPC1-220ENST00000522658 PBX2P40425 430 aa10.85□□□□□ -0.67
PABPC1-220ENST00000522658 ANKRD13DQ6ZTN6 518 aa10.85□□□□□ -0.67
PABPC1-220ENST00000522658 PLPP6Q8IY26 295 aa10.85□□□□□ -0.67
PABPC1-220ENST00000522658 DSG2Q14126 1118 aa10.84□□□□□ -0.67
PABPC1-220ENST00000522658 TSPOAP1O95153 1857 aa10.84□□□□□ -0.67
PABPC1-220ENST00000522658 PTPRGP23470 1445 aa10.83□□□□□ -0.68
PABPC1-220ENST00000522658 AXIN2Q9Y2T1 843 aa10.81□□□□□ -0.68
PABPC1-220ENST00000522658 TNIKQ9UKE5 1360 aa10.79□□□□□ -0.68
PABPC1-220ENST00000522658 IQGAP2Q13576 1575 aa10.79□□□□□ -0.68
PABPC1-220ENST00000522658 PSDA5PKW4 1024 aaPredicted RBP10.79□□□□□ -0.68
PABPC1-220ENST00000522658 ABCC2Q92887 1545 aa10.79□□□□□ -0.68
PABPC1-220ENST00000522658 IGF1RP08069 1367 aa10.78□□□□□ -0.68
PABPC1-220ENST00000522658 CRISPLD2Q9H0B8 497 aa10.78□□□□□ -0.68
PABPC1-220ENST00000522658 RYDENQ9NUL5 291 aaKnown RBP10.78□□□□□ -0.68
PABPC1-220ENST00000522658 PLB1Q6P1J6 1458 aa10.78□□□□□ -0.68
PABPC1-220ENST00000522658 CARMIL1Q5VZK9 1371 aa10.77□□□□□ -0.68
PABPC1-220ENST00000522658 ASXL2Q76L83 1435 aa10.75□□□□□ -0.69
PABPC1-220ENST00000522658 ARHGAP33O14559 1287 aa10.75□□□□□ -0.69
PABPC1-220ENST00000522658 TEX14Q8IWB6 1497 aa10.74□□□□□ -0.69
PABPC1-220ENST00000522658 OXER1Q8TDS5 423 aa10.74□□□□□ -0.69
PABPC1-220ENST00000522658 GTPBP6O43824 516 aaPredicted RBP10.73□□□□□ -0.69
PABPC1-220ENST00000522658 TBC1D12O60347 775 aa10.73□□□□□ -0.69
PABPC1-220ENST00000522658 UACAQ9BZF9 1416 aa10.73□□□□□ -0.69
PABPC1-220ENST00000522658 NCKAP5LQ9HCH0 1330 aa10.72□□□□□ -0.69
PABPC1-220ENST00000522658 GLI2P10070 1586 aa10.72□□□□□ -0.69
PABPC1-220ENST00000522658 UHRF1BP1LA0JNW5 1464 aa10.71□□□□□ -0.69
PABPC1-220ENST00000522658 ADGRD1Q6QNK2 874 aa10.71□□□□□ -0.69
PABPC1-220ENST00000522658 ADGRL1O94910 1474 aa10.7□□□□□ -0.7
PABPC1-220ENST00000522658 PPP1R15BQ5SWA1 713 aa10.7□□□□□ -0.7
PABPC1-220ENST00000522658 DMRTA1Q5VZB9 504 aa10.69□□□□□ -0.7
PABPC1-220ENST00000522658 FAM9AQ8IZU1 332 aaPredicted RBP10.69□□□□□ -0.7
PABPC1-220ENST00000522658 RAPGEF2Q9Y4G8 1499 aa10.68□□□□□ -0.7
PABPC1-220ENST00000522658 TK2O00142 265 aa10.68□□□□□ -0.7
PABPC1-220ENST00000522658 HRO43593 1189 aa10.68□□□□□ -0.7
PABPC1-220ENST00000522658 PSEN2P49810 448 aa10.68□□□□□ -0.7
PABPC1-220ENST00000522658 PPP4R3BQ5MIZ7 849 aa10.68□□□□□ -0.7
PABPC1-220ENST00000522658 EPRSP07814 1512 aaKnown RBP10.68□□□□□ -0.7
PABPC1-220ENST00000522658 KIAA0556O60303 1618 aa10.67□□□□□ -0.7
PABPC1-220ENST00000522658 ZCCHC11Q5TAX3 1644 aaKnown RBP10.67□□□□□ -0.7
PABPC1-220ENST00000522658 PPRC1Q5VV67 1664 aaKnown RBP10.66□□□□□ -0.7
PABPC1-220ENST00000522658 PDE4AP27815 886 aa10.66□□□□□ -0.7
PABPC1-220ENST00000522658 UPF1Q92900 1129 aaKnown RBP eCLIP10.66□□□□□ -0.7
PABPC1-220ENST00000522658 DISP1Q96F81 1524 aa10.66□□□□□ -0.7
PABPC1-220ENST00000522658 MAP3K4Q9Y6R4 1608 aa10.66□□□□□ -0.7
PABPC1-220ENST00000522658 UGGT2Q9NYU1 1516 aa10.65□□□□□ -0.7
PABPC1-220ENST00000522658 KDM5BQ9UGL1 1544 aa10.65□□□□□ -0.7
PABPC1-220ENST00000522658 WDR7Q9Y4E6 1490 aa10.65□□□□□ -0.7
PABPC1-220ENST00000522658 GOLGA3Q08378 1498 aa10.64□□□□□ -0.71
PABPC1-220ENST00000522658 CTTNBP2Q8WZ74 1663 aa10.63□□□□□ -0.71
PABPC1-220ENST00000522658 MFSD10Q14728 455 aa10.62□□□□□ -0.71
PABPC1-220ENST00000522658 ANO8Q9HCE9 1232 aaPredicted RBP10.62□□□□□ -0.71
PABPC1-220ENST00000522658 HECW2Q9P2P5 1572 aa10.61□□□□□ -0.71
PABPC1-220ENST00000522658 CFAP43Q8NDM7 1665 aa10.6□□□□□ -0.71
PABPC1-220ENST00000522658 CD109Q6YHK3 1445 aa10.59□□□□□ -0.71
PABPC1-220ENST00000522658 FOSBP53539 338 aa10.59□□□□□ -0.71
PABPC1-220ENST00000522658 KCNH8Q96L42 1107 aa10.59□□□□□ -0.71
PABPC1-220ENST00000522658 LARP6Q9BRS8 491 aaKnown RBP10.59□□□□□ -0.71
PABPC1-220ENST00000522658 ZNF454Q8N9F8 522 aa10.58□□□□□ -0.72
PABPC1-220ENST00000522658 DDX27Q96GQ7 796 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms