RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 CENPBP07199 599 aaPredicted RBP26.08■■□□□ 1.77
TRAPPC9-210ENST00000521667 ZNF518AQ6AHZ1 1483 aa26.04■■□□□ 1.76
TRAPPC9-210ENST00000521667 CCDC144AA2RUR9 1427 aa26.03■■□□□ 1.76
TRAPPC9-210ENST00000521667 TSPOAP1O95153 1857 aa26.03■■□□□ 1.76
TRAPPC9-210ENST00000521667 PLA2R1Q13018 1463 aa26.03■■□□□ 1.76
TRAPPC9-210ENST00000521667 NEO1Q92859 1461 aa26.02■■□□□ 1.76
TRAPPC9-210ENST00000521667 YTHDC1Q96MU7 727 aaKnown RBP26.02■■□□□ 1.76
TRAPPC9-210ENST00000521667 MYT1LQ9UL68 1186 aa26.02■■□□□ 1.76
TRAPPC9-210ENST00000521667 UHRF1BP1Q6BDS2 1440 aa26.02■■□□□ 1.76
TRAPPC9-210ENST00000521667 DEPDC5O75140 1603 aa26■■□□□ 1.75
TRAPPC9-210ENST00000521667 ATP10AO60312 1499 aa25.99■■□□□ 1.75
TRAPPC9-210ENST00000521667 POGZQ7Z3K3 1410 aa25.99■■□□□ 1.75
TRAPPC9-210ENST00000521667 DHX29Q7Z478 1369 aaKnown RBP25.99■■□□□ 1.75
TRAPPC9-210ENST00000521667 KIF13AQ9H1H9 1805 aa25.98■■□□□ 1.75
TRAPPC9-210ENST00000521667 PPRC1Q5VV67 1664 aaKnown RBP25.97■■□□□ 1.75
TRAPPC9-210ENST00000521667 EIF2AK4Q9P2K8 1649 aaKnown RBP25.97■■□□□ 1.75
TRAPPC9-210ENST00000521667 ZNF326Q5BKZ1 582 aaKnown RBP25.96■■□□□ 1.75
TRAPPC9-210ENST00000521667 SPATA31E1Q6ZUB1 1445 aa25.96■■□□□ 1.75
TRAPPC9-210ENST00000521667 KIDINS220Q9ULH0 1771 aa25.96■■□□□ 1.75
TRAPPC9-210ENST00000521667 RAPGEF3O95398 923 aa25.95■■□□□ 1.75
TRAPPC9-210ENST00000521667 KDM5CP41229 1560 aa25.95■■□□□ 1.74
TRAPPC9-210ENST00000521667 WASHC2AQ641Q2 1341 aa25.94■■□□□ 1.74
TRAPPC9-210ENST00000521667 RALGAPBQ86X10 1494 aa25.92■■□□□ 1.74
TRAPPC9-210ENST00000521667 KANK1Q14678 1352 aa25.92■■□□□ 1.74
TRAPPC9-210ENST00000521667 KIF3BO15066 747 aa25.92■■□□□ 1.74
TRAPPC9-210ENST00000521667 DCAF11Q8TEB1 546 aa25.92■■□□□ 1.74
TRAPPC9-210ENST00000521667 VWDEQ8N2E2 1590 aa25.91■■□□□ 1.74
TRAPPC9-210ENST00000521667 MLH3Q9UHC1 1453 aa25.91■■□□□ 1.74
TRAPPC9-210ENST00000521667 KDM2AQ9Y2K7 1162 aa25.89■■□□□ 1.74
TRAPPC9-210ENST00000521667 PRDM15P57071 1507 aaPredicted RBP25.89■■□□□ 1.73
TRAPPC9-210ENST00000521667 E9PCH4 1651 aa25.89■■□□□ 1.73
TRAPPC9-210ENST00000521667 RICTORQ6R327 1708 aa25.88■■□□□ 1.73
TRAPPC9-210ENST00000521667 HECW2Q9P2P5 1572 aa25.88■■□□□ 1.73
TRAPPC9-210ENST00000521667 A2MP01023 1474 aa25.87■■□□□ 1.73
TRAPPC9-210ENST00000521667 TET3O43151 1660 aa25.87■■□□□ 1.73
TRAPPC9-210ENST00000521667 ANP32CO43423 234 aa25.87■■□□□ 1.73
TRAPPC9-210ENST00000521667 MROH1Q8NDA8 1641 aa25.86■■□□□ 1.73
TRAPPC9-210ENST00000521667 USP47Q96K76 1375 aa25.86■■□□□ 1.73
TRAPPC9-210ENST00000521667 CCDC7Q96M83 1385 aa25.85■■□□□ 1.73
TRAPPC9-210ENST00000521667 FRMPD1Q5SYB0 1578 aa25.84■■□□□ 1.73
TRAPPC9-210ENST00000521667 C11orf95C9JLR9 678 aaPredicted RBP25.83■■□□□ 1.73
TRAPPC9-210ENST00000521667 RGL3Q3MIN7 710 aa25.83■■□□□ 1.73
TRAPPC9-210ENST00000521667 TRPM2O94759 1503 aa25.83■■□□□ 1.73
TRAPPC9-210ENST00000521667 PTPRTO14522 1441 aa25.83■■□□□ 1.73
TRAPPC9-210ENST00000521667 ABCA6Q8N139 1617 aa25.83■■□□□ 1.73
TRAPPC9-210ENST00000521667 PRAG1Q86YV5 1406 aa25.82■■□□□ 1.72
TRAPPC9-210ENST00000521667 CARD11Q9BXL7 1154 aa25.8■■□□□ 1.72
TRAPPC9-210ENST00000521667 DNAJC5Q9H3Z4 198 aa25.8■■□□□ 1.72
TRAPPC9-210ENST00000521667 RNF17Q9BXT8 1623 aaKnown RBP25.78■■□□□ 1.72
TRAPPC9-210ENST00000521667 SPHKAPQ2M3C7 1700 aa25.78■■□□□ 1.72
TRAPPC9-210ENST00000521667 CNTLNQ9NXG0 1405 aa25.77■■□□□ 1.72
TRAPPC9-210ENST00000521667 CCER2I3L3R5 266 aa25.77■■□□□ 1.72
TRAPPC9-210ENST00000521667 KIF7Q2M1P5 1343 aa25.77■■□□□ 1.72
TRAPPC9-210ENST00000521667 POLR1AO95602 1720 aaPredicted RBP25.76■■□□□ 1.71
TRAPPC9-210ENST00000521667 LMTK2Q8IWU2 1503 aa25.76■■□□□ 1.71
TRAPPC9-210ENST00000521667 ROCK2O75116 1388 aaKnown RBP25.75■■□□□ 1.71
TRAPPC9-210ENST00000521667 DIP2CQ9Y2E4 1556 aa25.75■■□□□ 1.71
TRAPPC9-210ENST00000521667 SCAF1Q9H7N4 1312 aaKnown RBP25.75■■□□□ 1.71
TRAPPC9-210ENST00000521667 TRPM1Q7Z4N2 1603 aa25.75■■□□□ 1.71
TRAPPC9-210ENST00000521667 YEATS2Q9ULM3 1422 aa25.75■■□□□ 1.71
TRAPPC9-210ENST00000521667 EFCAB6Q5THR3 1501 aa25.74■■□□□ 1.71
TRAPPC9-210ENST00000521667 BCORL1Q5H9F3 1711 aa25.72■■□□□ 1.71
TRAPPC9-210ENST00000521667 CLTCL1P53675 1640 aa25.72■■□□□ 1.71
TRAPPC9-210ENST00000521667 COL17A1Q9UMD9 1497 aaPredicted RBP25.71■■□□□ 1.71
TRAPPC9-210ENST00000521667 CEP152O94986 1710 aa25.7■■□□□ 1.71
TRAPPC9-210ENST00000521667 ARID4BQ4LE39 1312 aaPredicted RBP25.69■■□□□ 1.7
TRAPPC9-210ENST00000521667 ZMYM4Q5VZL5 1548 aa25.69■■□□□ 1.7
TRAPPC9-210ENST00000521667 GPRASP1Q5JY77 1395 aa25.69■■□□□ 1.7
TRAPPC9-210ENST00000521667 GGT6Q6P531 493 aa25.65■■□□□ 1.7
TRAPPC9-210ENST00000521667 LAMC1P11047 1609 aa25.65■■□□□ 1.7
TRAPPC9-210ENST00000521667 NEURL4Q96JN8 1562 aa25.65■■□□□ 1.7
TRAPPC9-210ENST00000521667 TRHP20396 242 aaPredicted RBP25.64■■□□□ 1.7
TRAPPC9-210ENST00000521667 STAC3Q96MF2 364 aa25.64■■□□□ 1.7
TRAPPC9-210ENST00000521667 ST20-MTHFSA0A0A6YYL1 179 aa25.64■■□□□ 1.69
TRAPPC9-210ENST00000521667 NBPF1Q3BBV0 1214 aa25.64■■□□□ 1.69
TRAPPC9-210ENST00000521667 ABCC3O15438 1527 aa25.6■■□□□ 1.69
TRAPPC9-210ENST00000521667 MADDQ8WXG6 1647 aa25.6■■□□□ 1.69
TRAPPC9-210ENST00000521667 NPATQ14207 1427 aa25.59■■□□□ 1.69
TRAPPC9-210ENST00000521667 UGGT1Q9NYU2 1555 aa25.59■■□□□ 1.69
TRAPPC9-210ENST00000521667 WASHC2CQ9Y4E1 1318 aa25.58■■□□□ 1.69
TRAPPC9-210ENST00000521667 GTF3C3Q9Y5Q9 886 aa25.57■■□□□ 1.68
TRAPPC9-210ENST00000521667 POLR3GLQ9BT43 218 aa25.55■■□□□ 1.68
TRAPPC9-210ENST00000521667 PRKRIP1Q9H875 184 aaPredicted RBP25.53■■□□□ 1.68
TRAPPC9-210ENST00000521667 SIGLEC1Q9BZZ2 1709 aa25.52■■□□□ 1.68
TRAPPC9-210ENST00000521667 CAMSAP1Q5T5Y3 1602 aa25.52■■□□□ 1.68
TRAPPC9-210ENST00000521667 KIF1BO60333 1816 aa25.51■■□□□ 1.67
TRAPPC9-210ENST00000521667 MYOM2P54296 1465 aa25.5■■□□□ 1.67
TRAPPC9-210ENST00000521667 ARHGEF40Q8TER5 1519 aa25.49■■□□□ 1.67
TRAPPC9-210ENST00000521667 ZC3H13Q5T200 1668 aaKnown RBP25.48■■□□□ 1.67
TRAPPC9-210ENST00000521667 ADGRB3O60242 1522 aa25.48■■□□□ 1.67
TRAPPC9-210ENST00000521667 ARHGAP31Q2M1Z3 1444 aa25.46■■□□□ 1.67
TRAPPC9-210ENST00000521667 REREQ9P2R6 1566 aa25.46■■□□□ 1.67
TRAPPC9-210ENST00000521667 MROH2AA6NES4 1674 aa25.46■■□□□ 1.67
TRAPPC9-210ENST00000521667 NOS1P29475 1434 aa25.46■■□□□ 1.67
TRAPPC9-210ENST00000521667 TESK2Q96S53 571 aa25.45■■□□□ 1.66
TRAPPC9-210ENST00000521667 CFAP65Q6ZU64 1925 aaKnown RBP25.43■■□□□ 1.66
TRAPPC9-210ENST00000521667 IFT172Q9UG01 1749 aa25.43■■□□□ 1.66
TRAPPC9-210ENST00000521667 KIAA1210Q9ULL0 1709 aa25.43■■□□□ 1.66
TRAPPC9-210ENST00000521667 IQGAP1P46940 1657 aa25.42■■□□□ 1.66
TRAPPC9-210ENST00000521667 SCAF11Q99590 1463 aaKnown RBP25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms