RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 PPP4R2Q9NY27 417 aa23.35■■□□□ 1.33
TRAM1-205ENST00000521425 EIF5BO60841 1220 aaKnown RBP23.35■■□□□ 1.33
TRAM1-205ENST00000521425 CCDC146Q8IYE0 955 aa23.34■■□□□ 1.33
TRAM1-205ENST00000521425 TEX14Q8IWB6 1497 aa23.33■■□□□ 1.33
TRAM1-205ENST00000521425 PLEKHH2Q8IVE3 1493 aa23.33■■□□□ 1.32
TRAM1-205ENST00000521425 IL27Q8NEV9 243 aa23.32■■□□□ 1.32
TRAM1-205ENST00000521425 ZBED9Q6R2W3 1325 aa23.31■■□□□ 1.32
TRAM1-205ENST00000521425 NPM1P06748 294 aaKnown RBP eCLIP23.3■■□□□ 1.32
TRAM1-205ENST00000521425 PNISRQ8TF01 805 aaKnown RBP23.3■■□□□ 1.32
TRAM1-205ENST00000521425 ERCC6L2Q5T890 1561 aa23.29■■□□□ 1.32
TRAM1-205ENST00000521425 DNMT1P26358 1616 aaKnown RBP23.28■■□□□ 1.32
TRAM1-205ENST00000521425 KNSTRNQ9Y448 316 aa23.27■■□□□ 1.32
TRAM1-205ENST00000521425 NUP160Q12769 1436 aa23.27■■□□□ 1.31
TRAM1-205ENST00000521425 CFAP70Q5T0N1 1121 aa23.26■■□□□ 1.31
TRAM1-205ENST00000521425 TMF1P82094 1093 aa23.25■■□□□ 1.31
TRAM1-205ENST00000521425 TMEM132EQ6IEE7 984 aa23.25■■□□□ 1.31
TRAM1-205ENST00000521425 NUDCQ9Y266 331 aa23.25■■□□□ 1.31
TRAM1-205ENST00000521425 EXOC6Q8TAG9 804 aa23.24■■□□□ 1.31
TRAM1-205ENST00000521425 TRAK1Q9UPV9 953 aa23.24■■□□□ 1.31
TRAM1-205ENST00000521425 STK26Q9P289 416 aa23.23■■□□□ 1.31
TRAM1-205ENST00000521425 SYCP2Q9BX26 1530 aa23.21■■□□□ 1.31
TRAM1-205ENST00000521425 WDR43Q15061 677 aaKnown RBP eCLIP23.21■■□□□ 1.31
TRAM1-205ENST00000521425 RTL5Q5HYW3 569 aaPredicted RBP23.21■■□□□ 1.31
TRAM1-205ENST00000521425 GCC2Q8IWJ2 1684 aa23.21■■□□□ 1.31
TRAM1-205ENST00000521425 SPATA31E1Q6ZUB1 1445 aa23.2■■□□□ 1.3
TRAM1-205ENST00000521425 MLECQ14165 292 aa23.2■■□□□ 1.3
TRAM1-205ENST00000521425 DHX29Q7Z478 1369 aaKnown RBP23.19■■□□□ 1.3
TRAM1-205ENST00000521425 SCAPERQ9BY12 1400 aa23.19■■□□□ 1.3
TRAM1-205ENST00000521425 DISP3Q9P2K9 1392 aa23.19■■□□□ 1.3
TRAM1-205ENST00000521425 FANCIQ9NVI1 1328 aa23.19■■□□□ 1.3
TRAM1-205ENST00000521425 KTN1Q86UP2 1357 aaKnown RBP23.18■■□□□ 1.3
TRAM1-205ENST00000521425 MYBBP1AQ9BQG0 1328 aaKnown RBP23.18■■□□□ 1.3
TRAM1-205ENST00000521425 RAPGEF3O95398 923 aa23.17■■□□□ 1.3
TRAM1-205ENST00000521425 ADAMTS8Q9UP79 889 aa23.17■■□□□ 1.3
TRAM1-205ENST00000521425 NLRP13Q86W25 1043 aa23.15■■□□□ 1.3
TRAM1-205ENST00000521425 TRAPPC8Q9Y2L5 1435 aa23.15■■□□□ 1.3
TRAM1-205ENST00000521425 RCAN3Q9UKA8 241 aa23.15■■□□□ 1.3
TRAM1-205ENST00000521425 CCDC141Q6ZP82 1450 aa23.15■■□□□ 1.3
TRAM1-205ENST00000521425 RRP7AQ9Y3A4 280 aaKnown RBP23.14■■□□□ 1.3
TRAM1-205ENST00000521425 RSPH4AQ5TD94 716 aa23.14■■□□□ 1.29
TRAM1-205ENST00000521425 CYB5RLQ6IPT4 315 aa23.13■■□□□ 1.29
TRAM1-205ENST00000521425 ABCC10Q5T3U5 1492 aa23.11■■□□□ 1.29
TRAM1-205ENST00000521425 PAK3O75914 559 aaPredicted RBP23.1■■□□□ 1.29
TRAM1-205ENST00000521425 RALBP1Q15311 655 aa23.1■■□□□ 1.29
TRAM1-205ENST00000521425 MBD5Q9P267 1494 aa23.09■■□□□ 1.29
TRAM1-205ENST00000521425 TESK2Q96S53 571 aa23.07■■□□□ 1.28
TRAM1-205ENST00000521425 NOP58Q9Y2X3 529 aaKnown RBP23.06■■□□□ 1.28
TRAM1-205ENST00000521425 BCORL1Q5H9F3 1711 aa23.06■■□□□ 1.28
TRAM1-205ENST00000521425 ADGRF5Q8IZF2 1346 aa23.05■■□□□ 1.28
TRAM1-205ENST00000521425 FAM135AQ9P2D6 1515 aa23.05■■□□□ 1.28
TRAM1-205ENST00000521425 C20orf194Q5TEA3 1177 aa23.04■■□□□ 1.28
TRAM1-205ENST00000521425 PPM1GO15355 546 aaPredicted RBP23.04■■□□□ 1.28
TRAM1-205ENST00000521425 STAG3Q9UJ98 1225 aa23.03■■□□□ 1.28
TRAM1-205ENST00000521425 WASHC2CQ9Y4E1 1318 aa23.03■■□□□ 1.28
TRAM1-205ENST00000521425 APAF1O14727 1248 aa23.02■■□□□ 1.28
TRAM1-205ENST00000521425 UBE2Q2Q8WVN8 375 aa23.02■■□□□ 1.28
TRAM1-205ENST00000521425 RGS3P49796 1198 aa23.02■■□□□ 1.28
TRAM1-205ENST00000521425 LAS1LQ9Y4W2 734 aaKnown RBP23.02■■□□□ 1.28
TRAM1-205ENST00000521425 ABCA8O94911 1581 aa23.02■■□□□ 1.28
TRAM1-205ENST00000521425 BCL2L13Q9BXK5 485 aa23.01■■□□□ 1.27
TRAM1-205ENST00000521425 SLC12A5Q9H2X9 1139 aa23.01■■□□□ 1.27
TRAM1-205ENST00000521425 CDC42BPAQ5VT25 1732 aa23.01■■□□□ 1.27
TRAM1-205ENST00000521425 PER1O15534 1290 aaPredicted RBP23■■□□□ 1.27
TRAM1-205ENST00000521425 CANXP27824 592 aaKnown RBP23■■□□□ 1.27
TRAM1-205ENST00000521425 ARHGEF12Q9NZN5 1544 aa23■■□□□ 1.27
TRAM1-205ENST00000521425 RRP1P56182 461 aaKnown RBP23■■□□□ 1.27
TRAM1-205ENST00000521425 ITSN2Q9NZM3 1697 aa23■■□□□ 1.27
TRAM1-205ENST00000521425 FRAT1Q92837 279 aaPredicted RBP23■■□□□ 1.27
TRAM1-205ENST00000521425 CRBNQ96SW2 442 aa23■■□□□ 1.27
TRAM1-205ENST00000521425 TTC37Q6PGP7 1564 aa22.98■■□□□ 1.27
TRAM1-205ENST00000521425 SAMD9LQ8IVG5 1584 aa22.98■■□□□ 1.27
TRAM1-205ENST00000521425 CFAP65Q6ZU64 1925 aaKnown RBP22.97■■□□□ 1.27
TRAM1-205ENST00000521425 PLA2R1Q13018 1463 aa22.97■■□□□ 1.27
TRAM1-205ENST00000521425 ERICH6BQ5W0A0 696 aa22.97■■□□□ 1.27
TRAM1-205ENST00000521425 ADGRL2O95490 1459 aa22.97■■□□□ 1.27
TRAM1-205ENST00000521425 PRAG1Q86YV5 1406 aa22.96■■□□□ 1.27
TRAM1-205ENST00000521425 PPP2R1AP30153 589 aa22.96■■□□□ 1.27
TRAM1-205ENST00000521425 ANP32AP39687 249 aaKnown RBP22.96■■□□□ 1.27
TRAM1-205ENST00000521425 PLEKHG5O94827 1062 aa22.95■■□□□ 1.26
TRAM1-205ENST00000521425 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.95■■□□□ 1.26
TRAM1-205ENST00000521425 A2MP01023 1474 aa22.94■■□□□ 1.26
TRAM1-205ENST00000521425 KANK1Q14678 1352 aa22.94■■□□□ 1.26
TRAM1-205ENST00000521425 OSCARQ8IYS5 282 aa22.94■■□□□ 1.26
TRAM1-205ENST00000521425 ERBINQ96RT1 1412 aa22.94■■□□□ 1.26
TRAM1-205ENST00000521425 RALGAPBQ86X10 1494 aa22.92■■□□□ 1.26
TRAM1-205ENST00000521425 SLC4A3P48751 1232 aa22.92■■□□□ 1.26
TRAM1-205ENST00000521425 CHD1O14646 1710 aa22.91■■□□□ 1.26
TRAM1-205ENST00000521425 NUTM2FA1L443 756 aa22.91■■□□□ 1.26
TRAM1-205ENST00000521425 CLUAP1Q96AJ1 413 aa22.9■■□□□ 1.26
TRAM1-205ENST00000521425 CABP2Q9NPB3 220 aa22.9■■□□□ 1.26
TRAM1-205ENST00000521425 ZBTB47Q9UFB7 747 aaPredicted RBP22.9■■□□□ 1.26
TRAM1-205ENST00000521425 FBLN1P23142 703 aa22.9■■□□□ 1.26
TRAM1-205ENST00000521425 SRPK2P78362 688 aaKnown RBP22.9■■□□□ 1.26
TRAM1-205ENST00000521425 MORC1Q86VD1 984 aa22.9■■□□□ 1.26
TRAM1-205ENST00000521425 U2SURPO15042 1029 aaKnown RBP22.89■■□□□ 1.26
TRAM1-205ENST00000521425 BRD4O60885 1362 aaPredicted RBP22.88■■□□□ 1.25
TRAM1-205ENST00000521425 PLCH2O75038 1416 aa22.87■■□□□ 1.25
TRAM1-205ENST00000521425 BCAR3O75815 825 aa22.87■■□□□ 1.25
TRAM1-205ENST00000521425 SOX12O15370 315 aa22.86■■□□□ 1.25
TRAM1-205ENST00000521425 MINK1Q8N4C8 1332 aaPredicted RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms