RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 SLC4A1APQ9BWU0 796 aaKnown RBP22.14■■□□□ 1.13
SREK1-209ENST00000520953 SIGLEC1Q9BZZ2 1709 aa22.14■■□□□ 1.13
SREK1-209ENST00000520953 MAGI2Q86UL8 1455 aa22.13■■□□□ 1.13
SREK1-209ENST00000520953 KDM5DQ9BY66 1539 aa22.12■■□□□ 1.13
SREK1-209ENST00000520953 MROH1Q8NDA8 1641 aa22.11■■□□□ 1.13
SREK1-209ENST00000520953 EIF2AK4Q9P2K8 1649 aaKnown RBP22.11■■□□□ 1.13
SREK1-209ENST00000520953 DEPDC5O75140 1603 aa22.11■■□□□ 1.13
SREK1-209ENST00000520953 ARHGEF40Q8TER5 1519 aa22.1■■□□□ 1.13
SREK1-209ENST00000520953 FAM135AQ9P2D6 1515 aa22.1■■□□□ 1.13
SREK1-209ENST00000520953 ATP10AO60312 1499 aa22.1■■□□□ 1.13
SREK1-209ENST00000520953 SIN3AQ96ST3 1273 aa22.09■■□□□ 1.13
SREK1-209ENST00000520953 PKD2Q13563 968 aa22.08■■□□□ 1.12
SREK1-209ENST00000520953 IQGAP3Q86VI3 1631 aa22.07■■□□□ 1.12
SREK1-209ENST00000520953 GGT6Q6P531 493 aa22.06■■□□□ 1.12
SREK1-209ENST00000520953 RNF17Q9BXT8 1623 aaKnown RBP22.05■■□□□ 1.12
SREK1-209ENST00000520953 PRDM15P57071 1507 aaPredicted RBP22.05■■□□□ 1.12
SREK1-209ENST00000520953 BCORL1Q5H9F3 1711 aa22.03■■□□□ 1.12
SREK1-209ENST00000520953 CLSPNQ9HAW4 1339 aa22.03■■□□□ 1.12
SREK1-209ENST00000520953 NEUROD1Q13562 356 aa22.02■■□□□ 1.12
SREK1-209ENST00000520953 VWDEQ8N2E2 1590 aa22.02■■□□□ 1.12
SREK1-209ENST00000520953 ACIN1Q9UKV3 1341 aaKnown RBP22.02■■□□□ 1.12
SREK1-209ENST00000520953 REREQ9P2R6 1566 aa22.01■■□□□ 1.11
SREK1-209ENST00000520953 CEP152O94986 1710 aa21.99■■□□□ 1.11
SREK1-209ENST00000520953 ANKRD30BQ9BXX2 1392 aa21.99■■□□□ 1.11
SREK1-209ENST00000520953 MLECQ14165 292 aa21.98■■□□□ 1.11
SREK1-209ENST00000520953 KANK1Q14678 1352 aa21.97■■□□□ 1.11
SREK1-209ENST00000520953 E9PCH4 1651 aa21.96■■□□□ 1.11
SREK1-209ENST00000520953 AGLP35573 1532 aa21.96■■□□□ 1.11
SREK1-209ENST00000520953 ABCC3O15438 1527 aa21.94■■□□□ 1.1
SREK1-209ENST00000520953 TET3O43151 1660 aa21.94■■□□□ 1.1
SREK1-209ENST00000520953 WASHC2CQ9Y4E1 1318 aa21.93■■□□□ 1.1
SREK1-209ENST00000520953 PLA2R1Q13018 1463 aa21.93■■□□□ 1.1
SREK1-209ENST00000520953 ARID4BQ4LE39 1312 aaPredicted RBP21.92■■□□□ 1.1
SREK1-209ENST00000520953 EFCAB6Q5THR3 1501 aa21.9■■□□□ 1.1
SREK1-209ENST00000520953 LMTK2Q8IWU2 1503 aa21.9■■□□□ 1.1
SREK1-209ENST00000520953 CAMSAP1Q5T5Y3 1602 aa21.87■■□□□ 1.09
SREK1-209ENST00000520953 CFAP65Q6ZU64 1925 aaKnown RBP21.86■■□□□ 1.09
SREK1-209ENST00000520953 NPATQ14207 1427 aa21.86■■□□□ 1.09
SREK1-209ENST00000520953 RPRD2Q5VT52 1461 aaKnown RBP21.84■■□□□ 1.09
SREK1-209ENST00000520953 CLTCQ00610 1675 aaKnown RBP21.84■■□□□ 1.09
SREK1-209ENST00000520953 ZC3H13Q5T200 1668 aaKnown RBP21.82■■□□□ 1.08
SREK1-209ENST00000520953 SPHKAPQ2M3C7 1700 aa21.82■■□□□ 1.08
SREK1-209ENST00000520953 UGGT1Q9NYU2 1555 aa21.82■■□□□ 1.08
SREK1-209ENST00000520953 PTPRTO14522 1441 aa21.8■■□□□ 1.08
SREK1-209ENST00000520953 TONSLQ96HA7 1378 aa21.79■■□□□ 1.08
SREK1-209ENST00000520953 CCDC144AA2RUR9 1427 aa21.79■■□□□ 1.08
SREK1-209ENST00000520953 TRPM2O94759 1503 aa21.79■■□□□ 1.08
SREK1-209ENST00000520953 CLTCL1P53675 1640 aa21.77■■□□□ 1.08
SREK1-209ENST00000520953 FBXO31Q5XUX0 539 aaPredicted RBP21.77■■□□□ 1.08
SREK1-209ENST00000520953 L3MBTL2Q969R5 705 aa21.77■■□□□ 1.07
SREK1-209ENST00000520953 ARHGAP31Q2M1Z3 1444 aa21.75■■□□□ 1.07
SREK1-209ENST00000520953 PPP6R1Q9UPN7 881 aa21.74■■□□□ 1.07
SREK1-209ENST00000520953 SYNMO15061 1565 aa21.73■■□□□ 1.07
SREK1-209ENST00000520953 NOS1P29475 1434 aa21.72■■□□□ 1.07
SREK1-209ENST00000520953 RGL3Q3MIN7 710 aa21.71■■□□□ 1.07
SREK1-209ENST00000520953 PREX1Q8TCU6 1659 aa21.71■■□□□ 1.07
SREK1-209ENST00000520953 ZMYM3Q14202 1370 aa21.71■■□□□ 1.07
SREK1-209ENST00000520953 ESF1Q9H501 851 aaKnown RBP21.71■■□□□ 1.07
SREK1-209ENST00000520953 PPP1R15AO75807 674 aaPredicted RBP21.7■■□□□ 1.06
SREK1-209ENST00000520953 FER1L4A9Z1Z3 1794 aa21.69■■□□□ 1.06
SREK1-209ENST00000520953 TIMELESSQ9UNS1 1208 aa21.69■■□□□ 1.06
SREK1-209ENST00000520953 CEBPAP49715 358 aaPredicted RBP21.68■■□□□ 1.06
SREK1-209ENST00000520953 ERVK-7P63135 1459 aa21.68■■□□□ 1.06
SREK1-209ENST00000520953 PLPPR3Q6T4P5 718 aa21.68■■□□□ 1.06
SREK1-209ENST00000520953 CNTLNQ9NXG0 1405 aa21.68■■□□□ 1.06
SREK1-209ENST00000520953 SPATA31E1Q6ZUB1 1445 aa21.67■■□□□ 1.06
SREK1-209ENST00000520953 MADDQ8WXG6 1647 aa21.66■■□□□ 1.06
SREK1-209ENST00000520953 MROH2AA6NES4 1674 aa21.65■■□□□ 1.06
SREK1-209ENST00000520953 PIK3C2BO00750 1634 aa21.64■■□□□ 1.05
SREK1-209ENST00000520953 NBPF8Q3BBV2 869 aa21.63■■□□□ 1.05
SREK1-209ENST00000520953 KDM2AQ9Y2K7 1162 aa21.63■■□□□ 1.05
SREK1-209ENST00000520953 IDI1Q13907 227 aa21.63■■□□□ 1.05
SREK1-209ENST00000520953 SPATA31D1Q6ZQQ2 1576 aa21.62■■□□□ 1.05
SREK1-209ENST00000520953 CHGAP10645 457 aaKnown RBP21.62■■□□□ 1.05
SREK1-209ENST00000520953 DCAF11Q8TEB1 546 aa21.62■■□□□ 1.05
SREK1-209ENST00000520953 C3P01024 1663 aa21.62■■□□□ 1.05
SREK1-209ENST00000520953 ADAMTSL3P82987 1691 aa21.61■■□□□ 1.05
SREK1-209ENST00000520953 RIMS1Q86UR5 1692 aaKnown RBP21.61■■□□□ 1.05
SREK1-209ENST00000520953 KIF1BO60333 1816 aa21.6■■□□□ 1.05
SREK1-209ENST00000520953 ZNF326Q5BKZ1 582 aaKnown RBP21.6■■□□□ 1.05
SREK1-209ENST00000520953 ADGRB3O60242 1522 aa21.58■■□□□ 1.05
SREK1-209ENST00000520953 MYO5BQ9ULV0 1848 aa21.56■■□□□ 1.04
SREK1-209ENST00000520953 SLC52A1Q9NWF4 448 aa21.55■■□□□ 1.04
SREK1-209ENST00000520953 TNRQ92752 1358 aa21.54■■□□□ 1.04
SREK1-209ENST00000520953 TMEM131LA2VDJ0 1609 aa21.53■■□□□ 1.04
SREK1-209ENST00000520953 NUTM2DQ5VT03 806 aaPredicted RBP21.51■■□□□ 1.03
SREK1-209ENST00000520953 NEURL4Q96JN8 1562 aa21.51■■□□□ 1.03
SREK1-209ENST00000520953 UHRF1BP1Q6BDS2 1440 aa21.49■■□□□ 1.03
SREK1-209ENST00000520953 PRAG1Q86YV5 1406 aa21.49■■□□□ 1.03
SREK1-209ENST00000520953 IFT172Q9UG01 1749 aa21.49■■□□□ 1.03
SREK1-209ENST00000520953 SENP3Q9H4L4 574 aaPredicted RBP21.47■■□□□ 1.03
SREK1-209ENST00000520953 ADGRF5Q8IZF2 1346 aa21.47■■□□□ 1.03
SREK1-209ENST00000520953 A2ML1A8K2U0 1454 aa21.46■■□□□ 1.03
SREK1-209ENST00000520953 PPLO60437 1756 aa21.46■■□□□ 1.03
SREK1-209ENST00000520953 HIRIP3Q9BW71 556 aaPredicted RBP21.46■■□□□ 1.03
SREK1-209ENST00000520953 NEXMIFQ5QGS0 1516 aa21.45■■□□□ 1.02
SREK1-209ENST00000520953 STAG3Q9UJ98 1225 aa21.45■■□□□ 1.02
SREK1-209ENST00000520953 PTPRMP28827 1452 aa21.44■■□□□ 1.02
SREK1-209ENST00000520953 NBPF1Q3BBV0 1214 aa21.43■■□□□ 1.02
SREK1-209ENST00000520953 TRPM1Q7Z4N2 1603 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms