RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 WIZO95785 1651 aa7.71□□□□□ -1.18
PABPC1-212ENST00000519622 WDR70Q9NW82 654 aa7.71□□□□□ -1.18
PABPC1-212ENST00000519622 TK2O00142 265 aa7.7□□□□□ -1.18
PABPC1-212ENST00000519622 MAP3K9P80192 1104 aa7.7□□□□□ -1.18
PABPC1-212ENST00000519622 BCL2L12Q9HB09 334 aa7.69□□□□□ -1.18
PABPC1-212ENST00000519622 ADAM33Q9BZ11 813 aa7.68□□□□□ -1.18
PABPC1-212ENST00000519622 KCNV2Q8TDN2 545 aa7.67□□□□□ -1.18
PABPC1-212ENST00000519622 JPH4Q96JJ6 628 aa7.67□□□□□ -1.18
PABPC1-212ENST00000519622 VPS9D1Q9Y2B5 631 aa7.67□□□□□ -1.18
PABPC1-212ENST00000519622 SMARCA4P51532 1647 aa7.67□□□□□ -1.18
PABPC1-212ENST00000519622 CAMK2BQ13554 666 aa7.66□□□□□ -1.18
PABPC1-212ENST00000519622 ZDHHC16Q969W1 377 aa7.65□□□□□ -1.18
PABPC1-212ENST00000519622 PCDHGA10Q9Y5H3 936 aa7.65□□□□□ -1.18
PABPC1-212ENST00000519622 DPYSL4O14531 572 aa7.64□□□□□ -1.19
PABPC1-212ENST00000519622 PTPREP23469 700 aa7.64□□□□□ -1.19
PABPC1-212ENST00000519622 E2F4Q16254 413 aa7.64□□□□□ -1.19
PABPC1-212ENST00000519622 ZBED2Q9BTP6 218 aa7.63□□□□□ -1.19
PABPC1-212ENST00000519622 BHMG1C9JSJ3 638 aaPredicted RBP7.62□□□□□ -1.19
PABPC1-212ENST00000519622 P3H3Q8IVL6 736 aa7.62□□□□□ -1.19
PABPC1-212ENST00000519622 KCTD12Q96CX2 325 aaKnown RBP7.62□□□□□ -1.19
PABPC1-212ENST00000519622 SLC4A5Q9BY07 1137 aa7.62□□□□□ -1.19
PABPC1-212ENST00000519622 TOP2AP11388 1531 aaKnown RBP7.62□□□□□ -1.19
PABPC1-212ENST00000519622 COL9A1P20849 921 aa7.61□□□□□ -1.19
PABPC1-212ENST00000519622 KCNH8Q96L42 1107 aa7.61□□□□□ -1.19
PABPC1-212ENST00000519622 HCSTQ9UBK5 93 aa7.61□□□□□ -1.19
PABPC1-212ENST00000519622 PEG3Q9GZU2 1588 aa7.59□□□□□ -1.19
PABPC1-212ENST00000519622 PHF14O94880 888 aa7.59□□□□□ -1.19
PABPC1-212ENST00000519622 STAC3Q96MF2 364 aa7.59□□□□□ -1.19
PABPC1-212ENST00000519622 SMARCA2P51531 1590 aa7.59□□□□□ -1.2
PABPC1-212ENST00000519622 PROX2Q3B8N5 592 aa7.57□□□□□ -1.2
PABPC1-212ENST00000519622 TYW1BQ6NUM6 668 aa7.57□□□□□ -1.2
PABPC1-212ENST00000519622 DDX12PQ92771 950 aa7.57□□□□□ -1.2
PABPC1-212ENST00000519622 PLA2G2EQ9NZK7 142 aa7.56□□□□□ -1.2
PABPC1-212ENST00000519622 PPP1R3GB7ZBB8 358 aa7.55□□□□□ -1.2
PABPC1-212ENST00000519622 NBR1Q14596 966 aa7.55□□□□□ -1.2
PABPC1-212ENST00000519622 ARHGEF1Q92888 912 aaKnown RBP7.55□□□□□ -1.2
PABPC1-212ENST00000519622 FBXW7Q969H0 707 aa7.55□□□□□ -1.2
PABPC1-212ENST00000519622 BCANQ96GW7 911 aa7.55□□□□□ -1.2
PABPC1-212ENST00000519622 PTPN5P54829 565 aa7.54□□□□□ -1.2
PABPC1-212ENST00000519622 C6orf132Q5T0Z8 1188 aa7.54□□□□□ -1.2
PABPC1-212ENST00000519622 RBM33Q96EV2 1170 aaKnown RBP7.54□□□□□ -1.2
PABPC1-212ENST00000519622 MRPL50Q8N5N7 158 aaKnown RBP7.53□□□□□ -1.2
PABPC1-212ENST00000519622 ARIH1Q9Y4X5 557 aaPredicted RBP7.53□□□□□ -1.2
PABPC1-212ENST00000519622 CCDC88BA6NC98 1476 aa7.52□□□□□ -1.21
PABPC1-212ENST00000519622 PRIM1P49642 420 aaKnown RBP7.52□□□□□ -1.21
PABPC1-212ENST00000519622 PDIA6Q15084 440 aa7.52□□□□□ -1.21
PABPC1-212ENST00000519622 THSD4Q6ZMP0 1018 aa7.52□□□□□ -1.21
PABPC1-212ENST00000519622 WNT2BQ93097 391 aa7.52□□□□□ -1.21
PABPC1-212ENST00000519622 EPAS1Q99814 870 aa7.52□□□□□ -1.21
PABPC1-212ENST00000519622 KIAA1468Q9P260 1216 aa7.51□□□□□ -1.21
PABPC1-212ENST00000519622 RABGEF1Q9UJ41 708 aa7.51□□□□□ -1.21
PABPC1-212ENST00000519622 GOLGA8CPA6NN73 597 aa7.5□□□□□ -1.21
PABPC1-212ENST00000519622 SEMA3EO15041 775 aa7.5□□□□□ -1.21
PABPC1-212ENST00000519622 TSR1Q2NL82 804 aaKnown RBP7.5□□□□□ -1.21
PABPC1-212ENST00000519622 NBPF3Q9H094 633 aa7.49□□□□□ -1.21
PABPC1-212ENST00000519622 LOC105371045A0A1W2PR82 267 aa7.47□□□□□ -1.21
PABPC1-212ENST00000519622 SPDYE16A6NNV3 312 aaPredicted RBP7.47□□□□□ -1.21
PABPC1-212ENST00000519622 EN1Q05925 392 aaPredicted RBP7.47□□□□□ -1.21
PABPC1-212ENST00000519622 SEPT9Q9UHD8 586 aaPredicted RBP7.47□□□□□ -1.21
PABPC1-212ENST00000519622 TRIM6-TRIM34B2RNG4 842 aa7.46□□□□□ -1.22
PABPC1-212ENST00000519622 MLLT3P42568 568 aaPredicted RBP7.46□□□□□ -1.22
PABPC1-212ENST00000519622 ABCC8Q09428 1581 aa7.46□□□□□ -1.22
PABPC1-212ENST00000519622 TESPA1A2RU30 521 aaPredicted RBP7.45□□□□□ -1.22
PABPC1-212ENST00000519622 GRXCR2A6NFK2 248 aa7.45□□□□□ -1.22
PABPC1-212ENST00000519622 MAP3K7O43318 606 aa7.45□□□□□ -1.22
PABPC1-212ENST00000519622 BCAMP50895 628 aa7.45□□□□□ -1.22
PABPC1-212ENST00000519622 TSKSQ9UJT2 592 aa7.45□□□□□ -1.22
PABPC1-212ENST00000519622 ATAD2BQ9ULI0 1458 aa7.44□□□□□ -1.22
PABPC1-212ENST00000519622 ONECUT3O60422 494 aaPredicted RBP7.44□□□□□ -1.22
PABPC1-212ENST00000519622 ZFRQ96KR1 1074 aaKnown RBP7.44□□□□□ -1.22
PABPC1-212ENST00000519622 FAM198AQ9UFP1 575 aa7.44□□□□□ -1.22
PABPC1-212ENST00000519622 C3orf80F5H4A9 247 aa7.43□□□□□ -1.22
PABPC1-212ENST00000519622 OSBPP22059 807 aa7.43□□□□□ -1.22
PABPC1-212ENST00000519622 LAPTM4BQ86VI4 370 aa7.43□□□□□ -1.22
PABPC1-212ENST00000519622 ANKK1Q8NFD2 765 aa7.42□□□□□ -1.22
PABPC1-212ENST00000519622 SOWAHBA6NEL2 793 aa7.41□□□□□ -1.22
PABPC1-212ENST00000519622 CDHR5Q9HBB8 845 aa7.41□□□□□ -1.22
PABPC1-212ENST00000519622 SMAPO00193 183 aa7.4□□□□□ -1.22
PABPC1-212ENST00000519622 CDCA7LQ96GN5 454 aa7.4□□□□□ -1.22
PABPC1-212ENST00000519622 WBP1LQ9NX94 342 aa7.4□□□□□ -1.22
PABPC1-212ENST00000519622 PRSS12P56730 875 aa7.39□□□□□ -1.23
PABPC1-212ENST00000519622 FAM98CQ17RN3 349 aaKnown RBP7.39□□□□□ -1.23
PABPC1-212ENST00000519622 SYNJ1O43426 1573 aa7.38□□□□□ -1.23
PABPC1-212ENST00000519622 LMOD2Q6P5Q4 547 aa7.38□□□□□ -1.23
PABPC1-212ENST00000519622 HMGXB3Q12766 1538 aa7.37□□□□□ -1.23
PABPC1-212ENST00000519622 RBM26Q5T8P6 1007 aaKnown RBP7.37□□□□□ -1.23
PABPC1-212ENST00000519622 IFFO2Q5TF58 517 aa7.37□□□□□ -1.23
PABPC1-212ENST00000519622 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.37□□□□□ -1.23
PABPC1-212ENST00000519622 PACS2Q86VP3 889 aa7.37□□□□□ -1.23
PABPC1-212ENST00000519622 NPDC1Q9NQX5 325 aaPredicted RBP7.37□□□□□ -1.23
PABPC1-212ENST00000519622 TULP1O00294 542 aaPredicted RBP7.36□□□□□ -1.23
PABPC1-212ENST00000519622 SMYD5Q6GMV2 418 aa7.36□□□□□ -1.23
PABPC1-212ENST00000519622 TATDN2Q93075 761 aa7.35□□□□□ -1.23
PABPC1-212ENST00000519622 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.35□□□□□ -1.23
PABPC1-212ENST00000519622 BAZ1BQ9UIG0 1483 aaKnown RBP7.35□□□□□ -1.23
PABPC1-212ENST00000519622 RUSC2Q8N2Y8 1516 aa7.34□□□□□ -1.23
PABPC1-212ENST00000519622 CERKQ8TCT0 537 aa7.34□□□□□ -1.23
PABPC1-212ENST00000519622 HPS5Q9UPZ3 1129 aa7.34□□□□□ -1.23
PABPC1-212ENST00000519622 NCAPD3P42695 1498 aa7.33□□□□□ -1.24
PABPC1-212ENST00000519622 A0A0G2JS52 829 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms