RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 DHX57Q6P158 1386 aaKnown RBP11.76□□□□□ -0.53
CLK4-203ENST00000519583 FER1L4A9Z1Z3 1794 aa11.76□□□□□ -0.53
CLK4-203ENST00000519583 ADGRL2O95490 1459 aa11.75□□□□□ -0.53
CLK4-203ENST00000519583 PTPRMP28827 1452 aa11.75□□□□□ -0.53
CLK4-203ENST00000519583 RAB3GAP2Q9H2M9 1393 aa11.74□□□□□ -0.53
CLK4-203ENST00000519583 ERBINQ96RT1 1412 aa11.73□□□□□ -0.53
CLK4-203ENST00000519583 SETD5Q9C0A6 1442 aa11.73□□□□□ -0.53
CLK4-203ENST00000519583 ROCK1Q13464 1354 aa11.72□□□□□ -0.53
CLK4-203ENST00000519583 CEBPAP49715 358 aaPredicted RBP11.72□□□□□ -0.53
CLK4-203ENST00000519583 CNTLNQ9NXG0 1405 aa11.71□□□□□ -0.53
CLK4-203ENST00000519583 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.71□□□□□ -0.533e-8■■■■□ 20.2
CLK4-203ENST00000519583 PPP6R1Q9UPN7 881 aa11.71□□□□□ -0.53
CLK4-203ENST00000519583 EIF2AK4Q9P2K8 1649 aaKnown RBP11.71□□□□□ -0.53
CLK4-203ENST00000519583 ANKRD50Q9ULJ7 1429 aa11.71□□□□□ -0.53
CLK4-203ENST00000519583 WASHC2CQ9Y4E1 1318 aa11.71□□□□□ -0.54
CLK4-203ENST00000519583 CLTCQ00610 1675 aaKnown RBP11.69□□□□□ -0.54
CLK4-203ENST00000519583 CLSPNQ9HAW4 1339 aa11.69□□□□□ -0.54
CLK4-203ENST00000519583 RNF17Q9BXT8 1623 aaKnown RBP11.69□□□□□ -0.54
CLK4-203ENST00000519583 ZMYM3Q14202 1370 aa11.69□□□□□ -0.54
CLK4-203ENST00000519583 KDM5DQ9BY66 1539 aa11.68□□□□□ -0.54
CLK4-203ENST00000519583 MROH1Q8NDA8 1641 aa11.66□□□□□ -0.54
CLK4-203ENST00000519583 KANK1Q14678 1352 aa11.66□□□□□ -0.54
CLK4-203ENST00000519583 C3P01024 1663 aa11.66□□□□□ -0.54
CLK4-203ENST00000519583 MROH2AA6NES4 1674 aa11.65□□□□□ -0.54
CLK4-203ENST00000519583 ABCC3O15438 1527 aa11.65□□□□□ -0.54
CLK4-203ENST00000519583 PRDM15P57071 1507 aaPredicted RBP11.65□□□□□ -0.54
CLK4-203ENST00000519583 FAM135AQ9P2D6 1515 aa11.65□□□□□ -0.54
CLK4-203ENST00000519583 NAIPQ13075 1403 aa11.64□□□□□ -0.55
CLK4-203ENST00000519583 DEPDC5O75140 1603 aa11.64□□□□□ -0.55
CLK4-203ENST00000519583 HFM1A2PYH4 1435 aa11.63□□□□□ -0.55
CLK4-203ENST00000519583 CEP152O94986 1710 aa11.63□□□□□ -0.55
CLK4-203ENST00000519583 FBXO31Q5XUX0 539 aaPredicted RBP11.63□□□□□ -0.55
CLK4-203ENST00000519583 ZC3H13Q5T200 1668 aaKnown RBP11.62□□□□□ -0.55
CLK4-203ENST00000519583 GCC2Q8IWJ2 1684 aa11.61□□□□□ -0.55
CLK4-203ENST00000519583 PZPP20742 1482 aa11.61□□□□□ -0.55
CLK4-203ENST00000519583 NUP155O75694 1391 aa11.61□□□□□ -0.55
CLK4-203ENST00000519583 NPATQ14207 1427 aa11.6□□□□□ -0.55
CLK4-203ENST00000519583 SETD1BQ9UPS6 1966 aaKnown RBP11.6□□□□□ -0.55
CLK4-203ENST00000519583 CAMSAP1Q5T5Y3 1602 aa11.6□□□□□ -0.55
CLK4-203ENST00000519583 UNC13BO14795 1591 aa11.6□□□□□ -0.55
CLK4-203ENST00000519583 VWDEQ8N2E2 1590 aa11.6□□□□□ -0.55
CLK4-203ENST00000519583 UHRF1BP1Q6BDS2 1440 aa11.6□□□□□ -0.55
CLK4-203ENST00000519583 TRIM52Q96A61 297 aa11.59□□□□□ -0.55
CLK4-203ENST00000519583 TNRQ92752 1358 aa11.58□□□□□ -0.55
CLK4-203ENST00000519583 LMTK2Q8IWU2 1503 aa11.58□□□□□ -0.56
CLK4-203ENST00000519583 LMTK3Q96Q04 1460 aa11.58□□□□□ -0.56
CLK4-203ENST00000519583 CFAP65Q6ZU64 1925 aaKnown RBP11.58□□□□□ -0.56
CLK4-203ENST00000519583 HSPA2P54652 639 aa11.58□□□□□ -0.56
CLK4-203ENST00000519583 PREX1Q8TCU6 1659 aa11.58□□□□□ -0.56
CLK4-203ENST00000519583 ARHGAP31Q2M1Z3 1444 aa11.57□□□□□ -0.56
CLK4-203ENST00000519583 ERVK-7P63135 1459 aa11.56□□□□□ -0.56
CLK4-203ENST00000519583 EFCAB6Q5THR3 1501 aa11.56□□□□□ -0.56
CLK4-203ENST00000519583 ZNF316A6NFI3 1004 aaPredicted RBP11.56□□□□□ -0.56
CLK4-203ENST00000519583 IQGAP3Q86VI3 1631 aa11.56□□□□□ -0.56
CLK4-203ENST00000519583 TET3O43151 1660 aa11.55□□□□□ -0.56
CLK4-203ENST00000519583 SPATA31D1Q6ZQQ2 1576 aa11.54□□□□□ -0.56
CLK4-203ENST00000519583 MYO3AQ8NEV4 1616 aa11.54□□□□□ -0.56
CLK4-203ENST00000519583 SIN3AQ96ST3 1273 aa11.54□□□□□ -0.56
CLK4-203ENST00000519583 SLC4A1APQ9BWU0 796 aaKnown RBP11.52□□□□□ -0.56
CLK4-203ENST00000519583 CEP170BQ9Y4F5 1589 aaPredicted RBP11.52□□□□□ -0.57
CLK4-203ENST00000519583 NEUROD1Q13562 356 aa11.52□□□□□ -0.57
CLK4-203ENST00000519583 RPRD2Q5VT52 1461 aaKnown RBP11.52□□□□□ -0.57
CLK4-203ENST00000519583 A2ML1A8K2U0 1454 aa11.52□□□□□ -0.57
CLK4-203ENST00000519583 NLRP1Q9C000 1473 aa11.52□□□□□ -0.57
CLK4-203ENST00000519583 E9PCH4 1651 aa11.51□□□□□ -0.57
CLK4-203ENST00000519583 NOS1P29475 1434 aa11.51□□□□□ -0.57
CLK4-203ENST00000519583 DIEXFQ68CQ4 756 aaKnown RBP11.51□□□□□ -0.57
CLK4-203ENST00000519583 PKD2Q13563 968 aa11.5□□□□□ -0.57
CLK4-203ENST00000519583 ZNF142P52746 1687 aaPredicted RBP11.5□□□□□ -0.57
CLK4-203ENST00000519583 STAG3Q9UJ98 1225 aa11.5□□□□□ -0.57
CLK4-203ENST00000519583 IDI1Q13907 227 aa11.49□□□□□ -0.57
CLK4-203ENST00000519583 SYNMO15061 1565 aa11.49□□□□□ -0.57
CLK4-203ENST00000519583 ACIN1Q9UKV3 1341 aaKnown RBP11.49□□□□□ -0.57
CLK4-203ENST00000519583 THEMISQ8N1K5 641 aaPredicted RBP11.48□□□□□ -0.57
CLK4-203ENST00000519583 UGGT1Q9NYU2 1555 aa11.48□□□□□ -0.57
CLK4-203ENST00000519583 MPHOSPH9Q99550 1183 aa11.48□□□□□ -0.57
CLK4-203ENST00000519583 SLC52A1Q9NWF4 448 aa11.48□□□□□ -0.57
CLK4-203ENST00000519583 FOXD1Q16676 465 aa11.47□□□□□ -0.57
CLK4-203ENST00000519583 CHGAP10645 457 aaKnown RBP11.46□□□□□ -0.57
CLK4-203ENST00000519583 NCKAP5LQ9HCH0 1330 aa11.46□□□□□ -0.58
CLK4-203ENST00000519583 PIK3C2BO00750 1634 aa11.45□□□□□ -0.58
CLK4-203ENST00000519583 PTPRTO14522 1441 aa11.44□□□□□ -0.58
CLK4-203ENST00000519583 PLA2R1Q13018 1463 aa11.44□□□□□ -0.58
CLK4-203ENST00000519583 SPHKAPQ2M3C7 1700 aa11.44□□□□□ -0.58
CLK4-203ENST00000519583 UBR1Q8IWV7 1749 aa11.44□□□□□ -0.58
CLK4-203ENST00000519583 ANKLE2Q86XL3 938 aa11.43□□□□□ -0.58
CLK4-203ENST00000519583 TIMELESSQ9UNS1 1208 aa11.43□□□□□ -0.58
CLK4-203ENST00000519583 STRCQ7RTU9 1775 aa11.43□□□□□ -0.58
CLK4-203ENST00000519583 DMRT2Q9Y5R5 561 aa11.42□□□□□ -0.58
CLK4-203ENST00000519583 ADGRB3O60242 1522 aa11.42□□□□□ -0.58
CLK4-203ENST00000519583 TRPM2O94759 1503 aa11.41□□□□□ -0.58
CLK4-203ENST00000519583 TONSLQ96HA7 1378 aa11.41□□□□□ -0.58
CLK4-203ENST00000519583 TMEM2Q9UHN6 1383 aa11.41□□□□□ -0.58
CLK4-203ENST00000519583 TXNDC2Q86VQ3 553 aa11.41□□□□□ -0.58
CLK4-203ENST00000519583 EID1Q9Y6B2 187 aa11.41□□□□□ -0.58
CLK4-203ENST00000519583 PPP1R15AO75807 674 aaPredicted RBP11.39□□□□□ -0.59
CLK4-203ENST00000519583 LTKP29376 864 aa11.39□□□□□ -0.59
CLK4-203ENST00000519583 CLTCL1P53675 1640 aa11.39□□□□□ -0.59
CLK4-203ENST00000519583 KDM5AP29375 1690 aaKnown RBP11.39□□□□□ -0.59
CLK4-203ENST00000519583 ZNF326Q5BKZ1 582 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms