RNA–Protein interactions for RNA: ENST00000519278.5

NDRG1-212, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2

Gene NDRG1, Length 3,983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-212ENST00000519278 SHANK2Q9UPX8 1470 aa13.05□□□□□ -0.32
NDRG1-212ENST00000519278 ZBED9Q6R2W3 1325 aa13.04□□□□□ -0.32
NDRG1-212ENST00000519278 MPHOSPH9Q99550 1183 aa13.04□□□□□ -0.32
NDRG1-212ENST00000519278 PRKRIP1Q9H875 184 aaPredicted RBP13.04□□□□□ -0.32
NDRG1-212ENST00000519278 MRS2Q9HD23 443 aa13.04□□□□□ -0.32
NDRG1-212ENST00000519278 CNTLNQ9NXG0 1405 aa13.04□□□□□ -0.32
NDRG1-212ENST00000519278 LAS1LQ9Y4W2 734 aaKnown RBP13.03□□□□□ -0.32
NDRG1-212ENST00000519278 UHRF1BP1Q6BDS2 1440 aa13.03□□□□□ -0.32
NDRG1-212ENST00000519278 MAST1Q9Y2H9 1570 aa13.02□□□□□ -0.32
NDRG1-212ENST00000519278 L3MBTL2Q969R5 705 aa13.01□□□□□ -0.33
NDRG1-212ENST00000519278 PLA2R1Q13018 1463 aa13□□□□□ -0.33
NDRG1-212ENST00000519278 CCDC7Q96M83 1385 aa13□□□□□ -0.33
NDRG1-212ENST00000519278 RNF17Q9BXT8 1623 aaKnown RBP13□□□□□ -0.33
NDRG1-212ENST00000519278 CHIC2Q9UKJ5 165 aa12.99□□□□□ -0.33
NDRG1-212ENST00000519278 NPM1P06748 294 aaKnown RBP eCLIP12.99□□□□□ -0.33
NDRG1-212ENST00000519278 MAGI2Q86UL8 1455 aa12.99□□□□□ -0.33
NDRG1-212ENST00000519278 LAMC1P11047 1609 aa12.98□□□□□ -0.33
NDRG1-212ENST00000519278 ARHGEF12Q9NZN5 1544 aa12.97□□□□□ -0.33
NDRG1-212ENST00000519278 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.97□□□□□ -0.33
NDRG1-212ENST00000519278 IQGAP3Q86VI3 1631 aa12.97□□□□□ -0.33
NDRG1-212ENST00000519278 PLXNC1O60486 1568 aa12.96□□□□□ -0.33
NDRG1-212ENST00000519278 BRPF3Q9ULD4 1205 aa12.96□□□□□ -0.33
NDRG1-212ENST00000519278 RALGAPBQ86X10 1494 aa12.95□□□□□ -0.34
NDRG1-212ENST00000519278 KIAA1107Q9UPP5 1409 aa12.95□□□□□ -0.34
NDRG1-212ENST00000519278 EIF4G2P78344 907 aaKnown RBP eCLIP12.94□□□□□ -0.34
NDRG1-212ENST00000519278 RNF123Q5XPI4 1314 aa12.94□□□□□ -0.34
NDRG1-212ENST00000519278 ZNF326Q5BKZ1 582 aaKnown RBP12.93□□□□□ -0.34
NDRG1-212ENST00000519278 ZMYND15Q9H091 742 aa12.93□□□□□ -0.34
NDRG1-212ENST00000519278 KIF7Q2M1P5 1343 aa12.93□□□□□ -0.34
NDRG1-212ENST00000519278 SMG6Q86US8 1419 aaKnown RBP12.92□□□□□ -0.34
NDRG1-212ENST00000519278 MYOM1P52179 1685 aa12.92□□□□□ -0.34
NDRG1-212ENST00000519278 NAP1L5Q96NT1 182 aaPredicted RBP12.92□□□□□ -0.34
NDRG1-212ENST00000519278 DEPDC5O75140 1603 aa12.92□□□□□ -0.34
NDRG1-212ENST00000519278 CLASP1Q7Z460 1538 aa12.92□□□□□ -0.34
NDRG1-212ENST00000519278 WASHC2CQ9Y4E1 1318 aa12.91□□□□□ -0.34
NDRG1-212ENST00000519278 ARXQ96QS3 562 aa12.91□□□□□ -0.34
NDRG1-212ENST00000519278 NUDCQ9Y266 331 aa12.91□□□□□ -0.34
NDRG1-212ENST00000519278 FAM135AQ9P2D6 1515 aa12.9□□□□□ -0.34
NDRG1-212ENST00000519278 ARID4BQ4LE39 1312 aaPredicted RBP12.9□□□□□ -0.34
NDRG1-212ENST00000519278 IQGAP1P46940 1657 aa12.89□□□□□ -0.35
NDRG1-212ENST00000519278 PRDM15P57071 1507 aaPredicted RBP12.89□□□□□ -0.35
NDRG1-212ENST00000519278 SKAP1Q86WV1 359 aa12.89□□□□□ -0.35
NDRG1-212ENST00000519278 ZCCHC11Q5TAX3 1644 aaKnown RBP12.89□□□□□ -0.35
NDRG1-212ENST00000519278 RSPH6AQ9H0K4 717 aa12.88□□□□□ -0.35
NDRG1-212ENST00000519278 C9orf84Q5VXU9 1444 aa12.88□□□□□ -0.35
NDRG1-212ENST00000519278 IFT172Q9UG01 1749 aa12.88□□□□□ -0.35
NDRG1-212ENST00000519278 SYCP2Q9BX26 1530 aa12.87□□□□□ -0.35
NDRG1-212ENST00000519278 MROH1Q8NDA8 1641 aa12.87□□□□□ -0.35
NDRG1-212ENST00000519278 PLEKHD1A6NEE1 506 aa12.86□□□□□ -0.35
NDRG1-212ENST00000519278 PDE4AP27815 886 aa12.86□□□□□ -0.35
NDRG1-212ENST00000519278 ABCC2Q92887 1545 aa12.86□□□□□ -0.35
NDRG1-212ENST00000519278 CEP152O94986 1710 aa12.85□□□□□ -0.35
NDRG1-212ENST00000519278 EXOC6Q8TAG9 804 aa12.85□□□□□ -0.35
NDRG1-212ENST00000519278 ANKRD50Q9ULJ7 1429 aa12.85□□□□□ -0.35
NDRG1-212ENST00000519278 ZNF777Q9ULD5 760 aaPredicted RBP12.85□□□□□ -0.35
NDRG1-212ENST00000519278 MADDQ8WXG6 1647 aa12.84□□□□□ -0.35
NDRG1-212ENST00000519278 SPHKAPQ2M3C7 1700 aa12.84□□□□□ -0.35
NDRG1-212ENST00000519278 VWDEQ8N2E2 1590 aa12.84□□□□□ -0.35
NDRG1-212ENST00000519278 HSP90AA2PQ14568 343 aaPredicted RBP12.84□□□□□ -0.35
NDRG1-212ENST00000519278 ATP10AO60312 1499 aa12.83□□□□□ -0.35
NDRG1-212ENST00000519278 A2MP01023 1474 aa12.83□□□□□ -0.35
NDRG1-212ENST00000519278 BACH2Q9BYV9 841 aa12.83□□□□□ -0.36
NDRG1-212ENST00000519278 SLC4A3P48751 1232 aa12.82□□□□□ -0.36
NDRG1-212ENST00000519278 USP35Q9P2H5 1018 aa12.82□□□□□ -0.36
NDRG1-212ENST00000519278 LRPPRCP42704 1394 aaKnown RBP12.82□□□□□ -0.36
NDRG1-212ENST00000519278 ABCC1P33527 1531 aa12.81□□□□□ -0.36
NDRG1-212ENST00000519278 PRAG1Q86YV5 1406 aa12.8□□□□□ -0.36
NDRG1-212ENST00000519278 GSE1Q14687 1217 aa12.79□□□□□ -0.36
NDRG1-212ENST00000519278 FRAT1Q92837 279 aaPredicted RBP12.79□□□□□ -0.36
NDRG1-212ENST00000519278 ABCA9Q8IUA7 1624 aa12.79□□□□□ -0.36
NDRG1-212ENST00000519278 GPRASP1Q5JY77 1395 aa12.78□□□□□ -0.36
NDRG1-212ENST00000519278 HSP90AA1P07900 732 aaKnown RBP12.78□□□□□ -0.36
NDRG1-212ENST00000519278 PDE4CQ08493 712 aa12.78□□□□□ -0.36
NDRG1-212ENST00000519278 CCDC141Q6ZP82 1450 aa12.78□□□□□ -0.36
NDRG1-212ENST00000519278 USP47Q96K76 1375 aa12.78□□□□□ -0.36
NDRG1-212ENST00000519278 INO80Q9ULG1 1556 aaPredicted RBP12.78□□□□□ -0.36
NDRG1-212ENST00000519278 MROH2AA6NES4 1674 aa12.78□□□□□ -0.36
NDRG1-212ENST00000519278 UHRF1BP1LA0JNW5 1464 aa12.78□□□□□ -0.36
NDRG1-212ENST00000519278 NFKBIBQ15653 356 aa12.78□□□□□ -0.36
NDRG1-212ENST00000519278 PNISRQ8TF01 805 aaKnown RBP12.78□□□□□ -0.36
NDRG1-212ENST00000519278 TCERG1O14776 1098 aaKnown RBP12.77□□□□□ -0.36
NDRG1-212ENST00000519278 CLTCL1P53675 1640 aa12.77□□□□□ -0.36
NDRG1-212ENST00000519278 ZC3H13Q5T200 1668 aaKnown RBP12.77□□□□□ -0.37
NDRG1-212ENST00000519278 RRP1P56182 461 aaKnown RBP12.76□□□□□ -0.37
NDRG1-212ENST00000519278 ZFYVE16Q7Z3T8 1539 aa12.76□□□□□ -0.37
NDRG1-212ENST00000519278 PPM1GO15355 546 aaPredicted RBP12.76□□□□□ -0.37
NDRG1-212ENST00000519278 CYB5RLQ6IPT4 315 aa12.74□□□□□ -0.37
NDRG1-212ENST00000519278 DCAF11Q8TEB1 546 aa12.74□□□□□ -0.37
NDRG1-212ENST00000519278 COL17A1Q9UMD9 1497 aaPredicted RBP12.74□□□□□ -0.37
NDRG1-212ENST00000519278 PLIN1O60240 522 aa12.72□□□□□ -0.37
NDRG1-212ENST00000519278 KIF15Q9NS87 1388 aa12.72□□□□□ -0.37
NDRG1-212ENST00000519278 ANKRD30AQ9BXX3 1397 aa12.72□□□□□ -0.37
NDRG1-212ENST00000519278 NEURL4Q96JN8 1562 aa12.72□□□□□ -0.37
NDRG1-212ENST00000519278 PER1O15534 1290 aaPredicted RBP12.72□□□□□ -0.37
NDRG1-212ENST00000519278 PKD2Q13563 968 aa12.72□□□□□ -0.37
NDRG1-212ENST00000519278 PLEKHH2Q8IVE3 1493 aa12.72□□□□□ -0.37
NDRG1-212ENST00000519278 SLC4A1APQ9BWU0 796 aaKnown RBP12.71□□□□□ -0.37
NDRG1-212ENST00000519278 KIAA1210Q9ULL0 1709 aa12.71□□□□□ -0.37
NDRG1-212ENST00000519278 CFDP1Q9UEE9 299 aaPredicted RBP12.71□□□□□ -0.37
NDRG1-212ENST00000519278 AMER1Q5JTC6 1135 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms