RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 ZNF687Q8N1G0 1237 aa12.38□□□□□ -0.43
SQLE-203ENST00000518931 PTPREP23469 700 aa12.36□□□□□ -0.43
SQLE-203ENST00000518931 CDHR5Q9HBB8 845 aa12.36□□□□□ -0.43
SQLE-203ENST00000518931 KCNK17Q96T54 332 aa12.34□□□□□ -0.43
SQLE-203ENST00000518931 POTEGQ6S5H5 508 aa12.33□□□□□ -0.44
SQLE-203ENST00000518931 POTEEQ6S8J3 1075 aa12.33□□□□□ -0.44
SQLE-203ENST00000518931 ZC3H15Q8WU90 426 aaKnown RBP12.33□□□□□ -0.44
SQLE-203ENST00000518931 NPDC1Q9NQX5 325 aaPredicted RBP12.33□□□□□ -0.44
SQLE-203ENST00000518931 AXIN2Q9Y2T1 843 aa12.33□□□□□ -0.44
SQLE-203ENST00000518931 ARHGAP33O14559 1287 aa12.32□□□□□ -0.44
SQLE-203ENST00000518931 PSEN2P49810 448 aa12.32□□□□□ -0.44
SQLE-203ENST00000518931 TPRNQ4KMQ1 711 aa12.32□□□□□ -0.44
SQLE-203ENST00000518931 KCNH8Q96L42 1107 aa12.32□□□□□ -0.44
SQLE-203ENST00000518931 POTEMA6NI47 508 aa12.31□□□□□ -0.44
SQLE-203ENST00000518931 FCHSD2O94868 740 aa12.31□□□□□ -0.44
SQLE-203ENST00000518931 COL9A1P20849 921 aa12.31□□□□□ -0.44
SQLE-203ENST00000518931 PTGDRQ13258 359 aa12.31□□□□□ -0.44
SQLE-203ENST00000518931 CERKQ8TCT0 537 aa12.29□□□□□ -0.44
SQLE-203ENST00000518931 GPR37O15354 613 aa12.28□□□□□ -0.44
SQLE-203ENST00000518931 PBX2P40425 430 aa12.28□□□□□ -0.44
SQLE-203ENST00000518931 PPP1R3GB7ZBB8 358 aa12.27□□□□□ -0.45
SQLE-203ENST00000518931 HIC1Q14526 733 aa12.27□□□□□ -0.45
SQLE-203ENST00000518931 PRKCSHP14314 528 aaPredicted RBP12.26□□□□□ -0.45
SQLE-203ENST00000518931 DMRTA1Q5VZB9 504 aa12.26□□□□□ -0.45
SQLE-203ENST00000518931 GNPATO15228 680 aa12.25□□□□□ -0.45
SQLE-203ENST00000518931 ZMYND10O75800 440 aa12.25□□□□□ -0.45
SQLE-203ENST00000518931 FECHP22830 423 aa12.24□□□□□ -0.45
SQLE-203ENST00000518931 PRSS12P56730 875 aa12.23□□□□□ -0.45
SQLE-203ENST00000518931 CDCA7LQ96GN5 454 aa12.23□□□□□ -0.45
SQLE-203ENST00000518931 CDAN1Q8IWY9 1227 aa12.22□□□□□ -0.45
SQLE-203ENST00000518931 PROX2Q3B8N5 592 aa12.21□□□□□ -0.45
SQLE-203ENST00000518931 BARGINQ6ZT62 677 aa12.21□□□□□ -0.45
SQLE-203ENST00000518931 KRI1Q8N9T8 703 aaKnown RBP12.21□□□□□ -0.45
SQLE-203ENST00000518931 ZBED2Q9BTP6 218 aa12.21□□□□□ -0.45
SQLE-203ENST00000518931 PADI6Q6TGC4 694 aa12.2□□□□□ -0.46
SQLE-203ENST00000518931 LSM11P83369 360 aaKnown RBP eCLIP12.18□□□□□ -0.46
SQLE-203ENST00000518931 ANKRD13DQ6ZTN6 518 aa12.18□□□□□ -0.46
SQLE-203ENST00000518931 TSKSQ9UJT2 592 aa12.18□□□□□ -0.46
SQLE-203ENST00000518931 TRIM6-TRIM34B2RNG4 842 aa12.17□□□□□ -0.46
SQLE-203ENST00000518931 SLC4A5Q9BY07 1137 aa12.17□□□□□ -0.46
SQLE-203ENST00000518931 KRTAP3-3Q9BYR6 98 aa12.17□□□□□ -0.46
SQLE-203ENST00000518931 KRTAP3-2Q9BYR7 98 aa12.17□□□□□ -0.46
SQLE-203ENST00000518931 RBM27Q9P2N5 1060 aaKnown RBP12.17□□□□□ -0.46
SQLE-203ENST00000518931 FAM198AQ9UFP1 575 aa12.17□□□□□ -0.46
SQLE-203ENST00000518931 TTC13Q8NBP0 860 aa12.16□□□□□ -0.46
SQLE-203ENST00000518931 VPS9D1Q9Y2B5 631 aa12.16□□□□□ -0.46
SQLE-203ENST00000518931 ONECUT3O60422 494 aaPredicted RBP12.15□□□□□ -0.46
SQLE-203ENST00000518931 PACS2Q86VP3 889 aa12.15□□□□□ -0.46
SQLE-203ENST00000518931 MINK1Q8N4C8 1332 aaPredicted RBP12.14□□□□□ -0.47
SQLE-203ENST00000518931 MAP2K5Q13163 448 aa12.14□□□□□ -0.47
SQLE-203ENST00000518931 SLC24A3Q9HC58 644 aa12.14□□□□□ -0.47
SQLE-203ENST00000518931 KIAA1468Q9P260 1216 aa12.14□□□□□ -0.47
SQLE-203ENST00000518931 TK2O00142 265 aa12.13□□□□□ -0.47
SQLE-203ENST00000518931 IRF6O14896 467 aa12.13□□□□□ -0.47
SQLE-203ENST00000518931 FAM161AQ3B820 660 aa12.13□□□□□ -0.47
SQLE-203ENST00000518931 ADGRD1Q6QNK2 874 aa12.12□□□□□ -0.47
SQLE-203ENST00000518931 RABGEF1Q9UJ41 708 aa12.12□□□□□ -0.47
SQLE-203ENST00000518931 C3orf80F5H4A9 247 aa12.1□□□□□ -0.47
SQLE-203ENST00000518931 TATDN2Q93075 761 aa12.1□□□□□ -0.47
SQLE-203ENST00000518931 PNMA3Q9UL41 463 aa12.1□□□□□ -0.47
SQLE-203ENST00000518931 ADGRG1Q9Y653 693 aa12.1□□□□□ -0.47
SQLE-203ENST00000518931 NUDT18Q6ZVK8 323 aa12.09□□□□□ -0.47
SQLE-203ENST00000518931 SMAPO00193 183 aa12.08□□□□□ -0.48
SQLE-203ENST00000518931 NBPF26B4DH59 902 aa12.07□□□□□ -0.48
SQLE-203ENST00000518931 OATP04181 439 aa12.07□□□□□ -0.48
SQLE-203ENST00000518931 CCDC102AQ96A19 550 aa12.07□□□□□ -0.48
SQLE-203ENST00000518931 AK7Q96M32 723 aa12.07□□□□□ -0.48
SQLE-203ENST00000518931 BHMG1C9JSJ3 638 aaPredicted RBP12.06□□□□□ -0.48
SQLE-203ENST00000518931 RBM46Q8TBY0 533 aaKnown RBP12.06□□□□□ -0.48
SQLE-203ENST00000518931 STAC3Q96MF2 364 aa12.06□□□□□ -0.48
SQLE-203ENST00000518931 HRO43593 1189 aa12.05□□□□□ -0.48
SQLE-203ENST00000518931 EYA1Q99502 592 aa12.05□□□□□ -0.48
SQLE-203ENST00000518931 PCDH10Q9P2E7 1040 aa12.05□□□□□ -0.48
SQLE-203ENST00000518931 SEPT9Q9UHD8 586 aaPredicted RBP12.05□□□□□ -0.48
SQLE-203ENST00000518931 NBPF3Q9H094 633 aa12.04□□□□□ -0.48
SQLE-203ENST00000518931 METTL3Q86U44 580 aaKnown RBP12.03□□□□□ -0.48
SQLE-203ENST00000518931 PXYLP1Q8TE99 480 aa12.03□□□□□ -0.48
SQLE-203ENST00000518931 MRPL50Q8N5N7 158 aaKnown RBP12.02□□□□□ -0.49
SQLE-203ENST00000518931 TRIM66O15016 1216 aa12.01□□□□□ -0.49
SQLE-203ENST00000518931 PHOX2BQ99453 314 aa12.01□□□□□ -0.49
SQLE-203ENST00000518931 RCCD1A6NED2 376 aa11.99□□□□□ -0.49
SQLE-203ENST00000518931 LAPTM4BQ86VI4 370 aa11.99□□□□□ -0.49
SQLE-203ENST00000518931 FAM98CQ17RN3 349 aaKnown RBP11.98□□□□□ -0.49
SQLE-203ENST00000518931 NLRP7Q8WX94 980 aa11.98□□□□□ -0.49
SQLE-203ENST00000518931 GOLGA8CPA6NN73 597 aa11.96□□□□□ -0.49
SQLE-203ENST00000518931 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.95□□□□□ -0.5
SQLE-203ENST00000518931 DNAJB2P25686 324 aa11.95□□□□□ -0.5
SQLE-203ENST00000518931 ZFRQ96KR1 1074 aaKnown RBP11.95□□□□□ -0.5
SQLE-203ENST00000518931 HDGFP51858 240 aaKnown RBP11.94□□□□□ -0.5
SQLE-203ENST00000518931 PDE4DQ08499 809 aa11.94□□□□□ -0.5
SQLE-203ENST00000518931 MDM2Q00987 491 aaPredicted RBP11.93□□□□□ -0.5
SQLE-203ENST00000518931 AMHR2Q16671 573 aa11.92□□□□□ -0.5
SQLE-203ENST00000518931 SAMD7Q7Z3H4 446 aa11.91□□□□□ -0.5
SQLE-203ENST00000518931 TMEM134Q9H6X4 195 aa11.91□□□□□ -0.5
SQLE-203ENST00000518931 TTLL12Q14166 644 aaPredicted RBP11.9□□□□□ -0.5
SQLE-203ENST00000518931 SWT1Q5T5J6 900 aaKnown RBP11.9□□□□□ -0.5
SQLE-203ENST00000518931 CLCN1P35523 988 aa11.89□□□□□ -0.51
SQLE-203ENST00000518931 SPNS2Q8IVW8 549 aa11.89□□□□□ -0.51
SQLE-203ENST00000518931 REPIN1Q9BWE0 567 aaKnown RBP11.89□□□□□ -0.51
SQLE-203ENST00000518931 DAXXQ9UER7 740 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms