RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 SLC4A1APQ9BWU0 796 aaKnown RBP25.86■■□□□ 1.73
SDC2-202ENST00000518385 PZPP20742 1482 aa25.85■■□□□ 1.73
SDC2-202ENST00000518385 RICTORQ6R327 1708 aa25.84■■□□□ 1.73
SDC2-202ENST00000518385 KDM5DQ9BY66 1539 aa25.83■■□□□ 1.73
SDC2-202ENST00000518385 SUPT16HQ9Y5B9 1047 aaKnown RBP25.83■■□□□ 1.73
SDC2-202ENST00000518385 DHX29Q7Z478 1369 aaKnown RBP25.81■■□□□ 1.72
SDC2-202ENST00000518385 HECW2Q9P2P5 1572 aa25.81■■□□□ 1.72
SDC2-202ENST00000518385 NUP155O75694 1391 aa25.81■■□□□ 1.72
SDC2-202ENST00000518385 RPRD2Q5VT52 1461 aaKnown RBP25.79■■□□□ 1.72
SDC2-202ENST00000518385 FRMPD1Q5SYB0 1578 aa25.77■■□□□ 1.72
SDC2-202ENST00000518385 UNC13BO14795 1591 aa25.76■■□□□ 1.71
SDC2-202ENST00000518385 A2MP01023 1474 aa25.74■■□□□ 1.71
SDC2-202ENST00000518385 TRHP20396 242 aaPredicted RBP25.73■■□□□ 1.71
SDC2-202ENST00000518385 ZMYM4Q5VZL5 1548 aa25.73■■□□□ 1.71
SDC2-202ENST00000518385 MAGI2Q86UL8 1455 aa25.72■■□□□ 1.71
SDC2-202ENST00000518385 ABCA6Q8N139 1617 aa25.71■■□□□ 1.71
SDC2-202ENST00000518385 EIF2AK4Q9P2K8 1649 aaKnown RBP25.71■■□□□ 1.71
SDC2-202ENST00000518385 COL17A1Q9UMD9 1497 aaPredicted RBP25.7■■□□□ 1.71
SDC2-202ENST00000518385 PKD2Q13563 968 aa25.69■■□□□ 1.7
SDC2-202ENST00000518385 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.69■■□□□ 1.71e-7■□□□□ 10
SDC2-202ENST00000518385 KIF3BO15066 747 aa25.69■■□□□ 1.7
SDC2-202ENST00000518385 FOXD1Q16676 465 aa25.69■■□□□ 1.7
SDC2-202ENST00000518385 FAM135AQ9P2D6 1515 aa25.69■■□□□ 1.7
SDC2-202ENST00000518385 DIP2CQ9Y2E4 1556 aa25.68■■□□□ 1.7
SDC2-202ENST00000518385 YEATS2Q9ULM3 1422 aa25.66■■□□□ 1.7
SDC2-202ENST00000518385 IQGAP3Q86VI3 1631 aa25.66■■□□□ 1.7
SDC2-202ENST00000518385 DEPDC5O75140 1603 aa25.65■■□□□ 1.7
SDC2-202ENST00000518385 L3MBTL2Q969R5 705 aa25.64■■□□□ 1.69
SDC2-202ENST00000518385 BCORL1Q5H9F3 1711 aa25.61■■□□□ 1.69
SDC2-202ENST00000518385 CCER2I3L3R5 266 aa25.61■■□□□ 1.69
SDC2-202ENST00000518385 ATP10AO60312 1499 aa25.6■■□□□ 1.69
SDC2-202ENST00000518385 KANK1Q14678 1352 aa25.6■■□□□ 1.69
SDC2-202ENST00000518385 VWDEQ8N2E2 1590 aa25.58■■□□□ 1.69
SDC2-202ENST00000518385 MROH1Q8NDA8 1641 aa25.58■■□□□ 1.69
SDC2-202ENST00000518385 RNF17Q9BXT8 1623 aaKnown RBP25.58■■□□□ 1.69
SDC2-202ENST00000518385 PRDM15P57071 1507 aaPredicted RBP25.57■■□□□ 1.68
SDC2-202ENST00000518385 REREQ9P2R6 1566 aa25.53■■□□□ 1.68
SDC2-202ENST00000518385 GGT6Q6P531 493 aa25.51■■□□□ 1.67
SDC2-202ENST00000518385 TSHZ2Q9NRE2 1034 aa25.49■■□□□ 1.67
SDC2-202ENST00000518385 TET3O43151 1660 aa25.49■■□□□ 1.67
SDC2-202ENST00000518385 EIF4G2P78344 907 aaKnown RBP eCLIP25.48■■□□□ 1.67
SDC2-202ENST00000518385 LMTK2Q8IWU2 1503 aa25.48■■□□□ 1.67
SDC2-202ENST00000518385 ARHGEF40Q8TER5 1519 aa25.48■■□□□ 1.67
SDC2-202ENST00000518385 AGLP35573 1532 aa25.48■■□□□ 1.67
SDC2-202ENST00000518385 PLA2R1Q13018 1463 aa25.45■■□□□ 1.66
SDC2-202ENST00000518385 E9PCH4 1651 aa25.45■■□□□ 1.66
SDC2-202ENST00000518385 UHRF1BP1Q6BDS2 1440 aa25.45■■□□□ 1.66
SDC2-202ENST00000518385 WASHC2CQ9Y4E1 1318 aa25.42■■□□□ 1.66
SDC2-202ENST00000518385 NBPF8Q3BBV2 869 aa25.41■■□□□ 1.66
SDC2-202ENST00000518385 HSPA5P11021 654 aaKnown RBP25.4■■□□□ 1.66
SDC2-202ENST00000518385 DDX10Q13206 875 aaKnown RBP25.4■■□□□ 1.66
SDC2-202ENST00000518385 CEP152O94986 1710 aa25.4■■□□□ 1.66
SDC2-202ENST00000518385 NEFLP07196 543 aa25.39■■□□□ 1.66
SDC2-202ENST00000518385 PPP6R1Q9UPN7 881 aa25.39■■□□□ 1.66
SDC2-202ENST00000518385 PTPRTO14522 1441 aa25.39■■□□□ 1.66
SDC2-202ENST00000518385 ABCC3O15438 1527 aa25.39■■□□□ 1.66
SDC2-202ENST00000518385 EFCAB6Q5THR3 1501 aa25.39■■□□□ 1.66
SDC2-202ENST00000518385 CCDC144AA2RUR9 1427 aa25.39■■□□□ 1.65
SDC2-202ENST00000518385 SIGLEC1Q9BZZ2 1709 aa25.37■■□□□ 1.65
SDC2-202ENST00000518385 ANP32CO43423 234 aa25.36■■□□□ 1.65
SDC2-202ENST00000518385 ANP32EQ9BTT0 268 aa25.36■■□□□ 1.65
SDC2-202ENST00000518385 HIRIP3Q9BW71 556 aaPredicted RBP25.35■■□□□ 1.65
SDC2-202ENST00000518385 ZC3H13Q5T200 1668 aaKnown RBP25.34■■□□□ 1.65
SDC2-202ENST00000518385 SPATA31E1Q6ZUB1 1445 aa25.34■■□□□ 1.65
SDC2-202ENST00000518385 SPHKAPQ2M3C7 1700 aa25.33■■□□□ 1.65
SDC2-202ENST00000518385 TRPM2O94759 1503 aa25.33■■□□□ 1.64
SDC2-202ENST00000518385 NPATQ14207 1427 aa25.31■■□□□ 1.64
SDC2-202ENST00000518385 RALGAPBQ86X10 1494 aa25.31■■□□□ 1.64
SDC2-202ENST00000518385 ARHGAP31Q2M1Z3 1444 aa25.31■■□□□ 1.64
SDC2-202ENST00000518385 CAMSAP1Q5T5Y3 1602 aa25.31■■□□□ 1.64
SDC2-202ENST00000518385 MLECQ14165 292 aa25.26■■□□□ 1.63
SDC2-202ENST00000518385 ARID4BQ4LE39 1312 aaPredicted RBP25.25■■□□□ 1.63
SDC2-202ENST00000518385 WASHC2AQ641Q2 1341 aa25.24■■□□□ 1.63
SDC2-202ENST00000518385 POLR1AO95602 1720 aaPredicted RBP25.24■■□□□ 1.63
SDC2-202ENST00000518385 CLTCL1P53675 1640 aa25.23■■□□□ 1.63
SDC2-202ENST00000518385 CNTLNQ9NXG0 1405 aa25.23■■□□□ 1.63
SDC2-202ENST00000518385 DCAF11Q8TEB1 546 aa25.22■■□□□ 1.63
SDC2-202ENST00000518385 STAC3Q96MF2 364 aa25.22■■□□□ 1.63
SDC2-202ENST00000518385 NOS1P29475 1434 aa25.22■■□□□ 1.63
SDC2-202ENST00000518385 FKBP8Q14318 412 aa25.22■■□□□ 1.63
SDC2-202ENST00000518385 CFAP65Q6ZU64 1925 aaKnown RBP25.21■■□□□ 1.63
SDC2-202ENST00000518385 ERICH6BQ5W0A0 696 aa25.21■■□□□ 1.63
SDC2-202ENST00000518385 CCDC7Q96M83 1385 aa25.21■■□□□ 1.63
SDC2-202ENST00000518385 RGL3Q3MIN7 710 aa25.19■■□□□ 1.62
SDC2-202ENST00000518385 USP47Q96K76 1375 aa25.19■■□□□ 1.62
SDC2-202ENST00000518385 CLTCQ00610 1675 aaKnown RBP25.18■■□□□ 1.62
SDC2-202ENST00000518385 NEURL4Q96JN8 1562 aa25.17■■□□□ 1.62
SDC2-202ENST00000518385 PRAG1Q86YV5 1406 aa25.17■■□□□ 1.62
SDC2-202ENST00000518385 ZNF326Q5BKZ1 582 aaKnown RBP25.16■■□□□ 1.62
SDC2-202ENST00000518385 ESF1Q9H501 851 aaKnown RBP25.16■■□□□ 1.62
SDC2-202ENST00000518385 UGGT1Q9NYU2 1555 aa25.15■■□□□ 1.62
SDC2-202ENST00000518385 KDM2AQ9Y2K7 1162 aa25.14■■□□□ 1.61
SDC2-202ENST00000518385 CARD11Q9BXL7 1154 aa25.13■■□□□ 1.61
SDC2-202ENST00000518385 LAMC1P11047 1609 aa25.13■■□□□ 1.61
SDC2-202ENST00000518385 TRPM1Q7Z4N2 1603 aa25.13■■□□□ 1.61
SDC2-202ENST00000518385 PREX1Q8TCU6 1659 aa25.12■■□□□ 1.61
SDC2-202ENST00000518385 SYNMO15061 1565 aa25.12■■□□□ 1.61
SDC2-202ENST00000518385 ZMYM3Q14202 1370 aa25.12■■□□□ 1.61
SDC2-202ENST00000518385 KIF1BO60333 1816 aa25.12■■□□□ 1.61
SDC2-202ENST00000518385 FBXO31Q5XUX0 539 aaPredicted RBP25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 192.1 ms