RNA–Protein interactions for RNA: ENST00000518094.1

NDRG1-208, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2

Gene NDRG1, Length 347 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-208ENST00000518094 SYCP2Q9BX26 1530 aa13.57□□□□□ -0.24
NDRG1-208ENST00000518094 INO80Q9ULG1 1556 aaPredicted RBP13.57□□□□□ -0.24
NDRG1-208ENST00000518094 TNRQ92752 1358 aa13.57□□□□□ -0.24
NDRG1-208ENST00000518094 XIRP1Q702N8 1843 aaKnown RBP13.56□□□□□ -0.24
NDRG1-208ENST00000518094 ARHGAP35Q9NRY4 1499 aa13.55□□□□□ -0.24
NDRG1-208ENST00000518094 IQGAP1P46940 1657 aa13.55□□□□□ -0.24
NDRG1-208ENST00000518094 FMN1Q68DA7 1419 aa13.55□□□□□ -0.24
NDRG1-208ENST00000518094 SYNMO15061 1565 aa13.54□□□□□ -0.24
NDRG1-208ENST00000518094 ZNF777Q9ULD5 760 aaPredicted RBP13.53□□□□□ -0.24
NDRG1-208ENST00000518094 THEMISQ8N1K5 641 aaPredicted RBP13.52□□□□□ -0.25
NDRG1-208ENST00000518094 ZC3H13Q5T200 1668 aaKnown RBP13.51□□□□□ -0.25
NDRG1-208ENST00000518094 FAM135BQ49AJ0 1406 aa13.51□□□□□ -0.25
NDRG1-208ENST00000518094 UGGT1Q9NYU2 1555 aa13.5□□□□□ -0.25
NDRG1-208ENST00000518094 GPATCH8Q9UKJ3 1502 aaKnown RBP13.5□□□□□ -0.25
NDRG1-208ENST00000518094 PZPP20742 1482 aa13.5□□□□□ -0.25
NDRG1-208ENST00000518094 MIA2Q96PC5 1412 aa13.5□□□□□ -0.25
NDRG1-208ENST00000518094 KIAA1107Q9UPP5 1409 aa13.47□□□□□ -0.25
NDRG1-208ENST00000518094 ADGBQ8N7X0 1667 aa13.47□□□□□ -0.25
NDRG1-208ENST00000518094 NLRP1Q9C000 1473 aa13.47□□□□□ -0.25
NDRG1-208ENST00000518094 FAM135AQ9P2D6 1515 aa13.45□□□□□ -0.26
NDRG1-208ENST00000518094 ROBO1Q9Y6N7 1651 aa13.44□□□□□ -0.26
NDRG1-208ENST00000518094 DHX29Q7Z478 1369 aaKnown RBP13.44□□□□□ -0.26
NDRG1-208ENST00000518094 EEA1Q15075 1411 aa13.43□□□□□ -0.26
NDRG1-208ENST00000518094 KDM5DQ9BY66 1539 aa13.43□□□□□ -0.26
NDRG1-208ENST00000518094 ZNF644Q9H582 1327 aaPredicted RBP13.42□□□□□ -0.26
NDRG1-208ENST00000518094 LTKP29376 864 aa13.42□□□□□ -0.26
NDRG1-208ENST00000518094 EHMT2Q96KQ7 1210 aa13.42□□□□□ -0.26
NDRG1-208ENST00000518094 MBD5Q9P267 1494 aa13.42□□□□□ -0.26
NDRG1-208ENST00000518094 TRIM52Q96A61 297 aa13.41□□□□□ -0.26
NDRG1-208ENST00000518094 LRP6O75581 1613 aa13.41□□□□□ -0.26
NDRG1-208ENST00000518094 KIF3BO15066 747 aa13.4□□□□□ -0.26
NDRG1-208ENST00000518094 CASKIN1Q8WXD9 1431 aa13.39□□□□□ -0.27
NDRG1-208ENST00000518094 RBM33Q96EV2 1170 aaKnown RBP13.39□□□□□ -0.27
NDRG1-208ENST00000518094 NCOA2Q15596 1464 aa13.39□□□□□ -0.27
NDRG1-208ENST00000518094 MAP3K1Q13233 1512 aa13.39□□□□□ -0.27
NDRG1-208ENST00000518094 WASHC2CQ9Y4E1 1318 aa13.39□□□□□ -0.27
NDRG1-208ENST00000518094 CCDC18Q5T9S5 1454 aa13.38□□□□□ -0.27
NDRG1-208ENST00000518094 PLEKHH2Q8IVE3 1493 aa13.38□□□□□ -0.27
NDRG1-208ENST00000518094 TMEM94Q12767 1356 aa13.38□□□□□ -0.27
NDRG1-208ENST00000518094 CFDP1Q9UEE9 299 aaPredicted RBP13.38□□□□□ -0.27
NDRG1-208ENST00000518094 UBR1Q8IWV7 1749 aa13.37□□□□□ -0.27
NDRG1-208ENST00000518094 RTEL1-TNFRSF6BF6WH68 1400 aa13.37□□□□□ -0.27
NDRG1-208ENST00000518094 SCAF11Q99590 1463 aaKnown RBP13.36□□□□□ -0.27
NDRG1-208ENST00000518094 ARHGAP23Q9P227 1491 aa13.36□□□□□ -0.27
NDRG1-208ENST00000518094 JCADQ9P266 1359 aa13.35□□□□□ -0.27
NDRG1-208ENST00000518094 UBTFP17480 764 aaKnown RBP13.35□□□□□ -0.27
NDRG1-208ENST00000518094 PHLPP1O60346 1717 aa13.35□□□□□ -0.27
NDRG1-208ENST00000518094 COL16A1Q07092 1604 aaPredicted RBP13.34□□□□□ -0.27
NDRG1-208ENST00000518094 TXNDC2Q86VQ3 553 aa13.33□□□□□ -0.28
NDRG1-208ENST00000518094 SLIT1O75093 1534 aa13.33□□□□□ -0.28
NDRG1-208ENST00000518094 ERVK-7P63135 1459 aa13.32□□□□□ -0.28
NDRG1-208ENST00000518094 ZNF772Q68DY9 489 aaPredicted RBP13.31□□□□□ -0.28
NDRG1-208ENST00000518094 CCNB3Q8WWL7 1395 aa13.31□□□□□ -0.28
NDRG1-208ENST00000518094 ABCC3O15438 1527 aa13.3□□□□□ -0.28
NDRG1-208ENST00000518094 RXRBP28702 533 aa13.3□□□□□ -0.28
NDRG1-208ENST00000518094 SLAIN2Q9P270 581 aa13.3□□□□□ -0.28
NDRG1-208ENST00000518094 CDK12Q9NYV4 1490 aaPredicted RBP13.29□□□□□ -0.28
NDRG1-208ENST00000518094 KCNA6P17658 529 aa13.28□□□□□ -0.28
NDRG1-208ENST00000518094 LRRC9Q6ZRR7 1453 aa13.28□□□□□ -0.28
NDRG1-208ENST00000518094 SETBP1Q9Y6X0 1596 aa13.28□□□□□ -0.28
NDRG1-208ENST00000518094 TET3O43151 1660 aa13.28□□□□□ -0.28
NDRG1-208ENST00000518094 PROSER2Q86WR7 435 aaPredicted RBP13.27□□□□□ -0.29
NDRG1-208ENST00000518094 SPATA31A6Q5VVP1 1343 aa13.27□□□□□ -0.29
NDRG1-208ENST00000518094 PRDM15P57071 1507 aaPredicted RBP13.27□□□□□ -0.29
NDRG1-208ENST00000518094 TIAM1Q13009 1591 aa13.27□□□□□ -0.29
NDRG1-208ENST00000518094 CFAP65Q6ZU64 1925 aaKnown RBP13.27□□□□□ -0.29
NDRG1-208ENST00000518094 CHIC1Q5VXU3 224 aa13.26□□□□□ -0.29
NDRG1-208ENST00000518094 FYCO1Q9BQS8 1478 aa13.26□□□□□ -0.29
NDRG1-208ENST00000518094 MROH1Q8NDA8 1641 aa13.25□□□□□ -0.29
NDRG1-208ENST00000518094 RGS12O14924 1447 aa13.25□□□□□ -0.29
NDRG1-208ENST00000518094 SLC26A8Q96RN1 970 aa13.25□□□□□ -0.29
NDRG1-208ENST00000518094 FGD6Q6ZV73 1430 aa13.24□□□□□ -0.29
NDRG1-208ENST00000518094 MEX3CQ5U5Q3 659 aaKnown RBP13.24□□□□□ -0.29
NDRG1-208ENST00000518094 TMEM2Q9UHN6 1383 aa13.23□□□□□ -0.29
NDRG1-208ENST00000518094 SHPRHQ149N8 1683 aa13.23□□□□□ -0.29
NDRG1-208ENST00000518094 NWD1Q149M9 1564 aa13.23□□□□□ -0.29
NDRG1-208ENST00000518094 CAMSAP2Q08AD1 1489 aa13.22□□□□□ -0.29
NDRG1-208ENST00000518094 CCDC141Q6ZP82 1450 aa13.22□□□□□ -0.29
NDRG1-208ENST00000518094 DIP2AQ14689 1571 aa13.21□□□□□ -0.29
NDRG1-208ENST00000518094 CEP152O94986 1710 aa13.21□□□□□ -0.3
NDRG1-208ENST00000518094 PIK3C2BO00750 1634 aa13.21□□□□□ -0.3
NDRG1-208ENST00000518094 MSH6P52701 1360 aa13.2□□□□□ -0.3
NDRG1-208ENST00000518094 AFF2P51816 1311 aa13.2□□□□□ -0.3
NDRG1-208ENST00000518094 EID1Q9Y6B2 187 aa13.2□□□□□ -0.3
NDRG1-208ENST00000518094 NKTRP30414 1462 aaKnown RBP13.19□□□□□ -0.3
NDRG1-208ENST00000518094 AHDC1Q5TGY3 1603 aaPredicted RBP13.19□□□□□ -0.3
NDRG1-208ENST00000518094 EP400Q96L91 3159 aa13.19□□□□□ -0.3
NDRG1-208ENST00000518094 KDM5AP29375 1690 aaKnown RBP13.18□□□□□ -0.3
NDRG1-208ENST00000518094 NUTM2BA6NNL0 878 aaPredicted RBP13.17□□□□□ -0.3
NDRG1-208ENST00000518094 NUTM2EB1AL46 878 aaPredicted RBP13.17□□□□□ -0.3
NDRG1-208ENST00000518094 NUTM2AQ8IVF1 878 aaPredicted RBP13.17□□□□□ -0.3
NDRG1-208ENST00000518094 QTRT2Q9H974 415 aaKnown RBP13.16□□□□□ -0.3
NDRG1-208ENST00000518094 ZRANB1Q9UGI0 708 aa13.16□□□□□ -0.3
NDRG1-208ENST00000518094 MTUS2Q5JR59 1369 aa13.16□□□□□ -0.3
NDRG1-208ENST00000518094 MAST1Q9Y2H9 1570 aa13.15□□□□□ -0.3
NDRG1-208ENST00000518094 NUTM2DQ5VT03 806 aaPredicted RBP13.15□□□□□ -0.3
NDRG1-208ENST00000518094 ARHGAP31Q2M1Z3 1444 aa13.14□□□□□ -0.31
NDRG1-208ENST00000518094 RBM6P78332 1123 aaKnown RBP13.14□□□□□ -0.31
NDRG1-208ENST00000518094 IDI1Q13907 227 aa13.14□□□□□ -0.31
NDRG1-208ENST00000518094 CHD2O14647 1828 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms