RNA–Protein interactions for RNA: ENST00000518094.1

NDRG1-208, Transcript of N-myc downstream regulated 1, humanhuman


Gene NDRG1, Length 347 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-208ENST00000518094 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.37□□□□□ -1.071e-46■■■■■ 1117.9
NDRG1-208ENST00000518094 RBFOX2O43251 390 aaKnown RBP eCLIP6.06□□□□□ -1.445e-11■■■■■ 48
NDRG1-208ENST00000518094 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.74□□□□□ -1.179e-6■■■■□ 24.9
NDRG1-208ENST00000518094 RPS3P23396 243 aaKnown RBP eCLIP7.41□□□□□ -1.223e-7■■■■□ 23.8
NDRG1-208ENST00000518094 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.12□□□□□ -0.791e-25■■■□□ 16.7
NDRG1-208ENST00000518094 AQRO60306 1485 aaKnown RBP eCLIP15.91■□□□□ 0.149e-8■■■□□ 15.1
NDRG1-208ENST00000518094 PPIGQ13427 754 aaKnown RBP eCLIP9.99□□□□□ -0.815e-31■■■□□ 14.7
NDRG1-208ENST00000518094 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.49□□□□□ -1.213e-9■■□□□ 13.8
NDRG1-208ENST00000518094 SF3A3Q12874 501 aaKnown RBP eCLIP7.3□□□□□ -1.241e-6■■□□□ 11.9
NDRG1-208ENST00000518094 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.41□□□□□ -0.742e-7■■□□□ 11.5
NDRG1-208ENST00000518094 EFTUD2Q15029 972 aaKnown RBP eCLIP7.5□□□□□ -1.212e-13■□□□□ 10.9
NDRG1-208ENST00000518094 RBM22Q9NW64 420 aaKnown RBP eCLIP7.66□□□□□ -1.188e-6■□□□□ 10.3
NDRG1-208ENST00000518094 NIP7Q9Y221 180 aaKnown RBP eCLIP10.98□□□□□ -0.654e-6■□□□□ 9.4
Retrieved 13 of 13 RNA–protein pairs in 5.7 ms