RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 LRCH3Q96II8 777 aa2.31□□□□□ -2.04
SNORA40.17-201ENST00000517256 SLC4A5Q9BY07 1137 aa2.31□□□□□ -2.04
SNORA40.17-201ENST00000517256 CDKN2AIPQ9NXV6 580 aaPredicted RBP2.31□□□□□ -2.04
SNORA40.17-201ENST00000517256 TSR3Q9UJK0 312 aaKnown RBP2.31□□□□□ -2.04
SNORA40.17-201ENST00000517256 SLC34A2O95436 690 aa2.3□□□□□ -2.04
SNORA40.17-201ENST00000517256 ZNF697Q5TEC3 545 aa2.3□□□□□ -2.04
SNORA40.17-201ENST00000517256 ZBED2Q9BTP6 218 aa2.3□□□□□ -2.04
SNORA40.17-201ENST00000517256 IL21Q9HBE4 155 aa2.3□□□□□ -2.04
SNORA40.17-201ENST00000517256 DACH1Q9UI36 760 aa2.3□□□□□ -2.04
SNORA40.17-201ENST00000517256 FOXC1Q12948 553 aa2.29□□□□□ -2.04
SNORA40.17-201ENST00000517256 Q8N3U1 123 aa2.29□□□□□ -2.04
SNORA40.17-201ENST00000517256 GALNT6Q8NCL4 622 aa2.29□□□□□ -2.04
SNORA40.17-201ENST00000517256 ZFRQ96KR1 1074 aaKnown RBP2.29□□□□□ -2.04
SNORA40.17-201ENST00000517256 CIZ1Q9ULV3 898 aaPredicted RBP2.29□□□□□ -2.04
SNORA40.17-201ENST00000517256 KRTAP4-8A0A0G2JLE6 195 aa2.28□□□□□ -2.04
SNORA40.17-201ENST00000517256 SOX12O15370 315 aa2.28□□□□□ -2.04
SNORA40.17-201ENST00000517256 RNF40O75150 1001 aa2.28□□□□□ -2.04
SNORA40.17-201ENST00000517256 MTRQ99707 1265 aa2.28□□□□□ -2.04
SNORA40.17-201ENST00000517256 SENP2Q9HC62 589 aa2.28□□□□□ -2.04
SNORA40.17-201ENST00000517256 PHF8Q9UPP1 1060 aa2.28□□□□□ -2.04
SNORA40.17-201ENST00000517256 VEGFBP49765 207 aa2.27□□□□□ -2.05
SNORA40.17-201ENST00000517256 PRR20EP86478 221 aa2.27□□□□□ -2.05
SNORA40.17-201ENST00000517256 PRR20CP86479 221 aa2.27□□□□□ -2.05
SNORA40.17-201ENST00000517256 PRR20DP86480 221 aa2.27□□□□□ -2.05
SNORA40.17-201ENST00000517256 PRR20BP86481 221 aa2.27□□□□□ -2.05
SNORA40.17-201ENST00000517256 PRR20AP86496 221 aa2.27□□□□□ -2.05
SNORA40.17-201ENST00000517256 ZNF598Q86UK7 904 aaKnown RBP2.27□□□□□ -2.05
SNORA40.17-201ENST00000517256 BCL2L12Q9HB09 334 aa2.27□□□□□ -2.05
SNORA40.17-201ENST00000517256 RABGEF1Q9UJ41 708 aa2.27□□□□□ -2.05
SNORA40.17-201ENST00000517256 ADAM23O75077 832 aa2.26□□□□□ -2.05
SNORA40.17-201ENST00000517256 CHRM1P11229 460 aaPredicted RBP2.26□□□□□ -2.05
SNORA40.17-201ENST00000517256 SNRPBP14678 240 aaKnown RBP2.26□□□□□ -2.05
SNORA40.17-201ENST00000517256 LORP23490 312 aaPredicted RBP2.26□□□□□ -2.05
SNORA40.17-201ENST00000517256 FOXK2Q01167 660 aa2.26□□□□□ -2.05
SNORA40.17-201ENST00000517256 TRIM67Q6ZTA4 783 aa2.26□□□□□ -2.05
SNORA40.17-201ENST00000517256 LAPTM4BQ86VI4 370 aa2.26□□□□□ -2.05
SNORA40.17-201ENST00000517256 SEPT9Q9UHD8 586 aaPredicted RBP2.26□□□□□ -2.05
SNORA40.17-201ENST00000517256 MSTNO14793 375 aa2.25□□□□□ -2.05
SNORA40.17-201ENST00000517256 IRS1P35568 1242 aa2.25□□□□□ -2.05
SNORA40.17-201ENST00000517256 NLRP6P59044 892 aa2.25□□□□□ -2.05
SNORA40.17-201ENST00000517256 TJAP1Q5JTD0 557 aa2.25□□□□□ -2.05
SNORA40.17-201ENST00000517256 SPRYD7Q5W111 196 aa2.25□□□□□ -2.05
SNORA40.17-201ENST00000517256 CYP4X1Q8N118 509 aa2.25□□□□□ -2.05
SNORA40.17-201ENST00000517256 KRTAP9-9Q9BYP9 154 aa2.25□□□□□ -2.05
SNORA40.17-201ENST00000517256 KRTAP9-4Q9BYQ2 154 aa2.25□□□□□ -2.05
SNORA40.17-201ENST00000517256 NXF1Q9UBU9 619 aaKnown RBP2.25□□□□□ -2.05
SNORA40.17-201ENST00000517256 DNMT3AQ9Y6K1 912 aaPredicted RBP2.25□□□□□ -2.05
SNORA40.17-201ENST00000517256 COPS2P61201 443 aa2.24□□□□□ -2.05
SNORA40.17-201ENST00000517256 CTC1Q2NKJ3 1217 aa2.24□□□□□ -2.05
SNORA40.17-201ENST00000517256 PROX2Q3B8N5 592 aa2.24□□□□□ -2.05
SNORA40.17-201ENST00000517256 LCE2CQ5TA81 110 aa2.24□□□□□ -2.05
SNORA40.17-201ENST00000517256 PROM2Q8N271 834 aa2.24□□□□□ -2.05
SNORA40.17-201ENST00000517256 NKX2-3Q8TAU0 364 aa2.24□□□□□ -2.05
SNORA40.17-201ENST00000517256 ZNF516Q92618 1163 aa2.24□□□□□ -2.05
SNORA40.17-201ENST00000517256 KIFC2Q96AC6 838 aa2.24□□□□□ -2.05
SNORA40.17-201ENST00000517256 TMUB1Q9BVT8 246 aa2.24□□□□□ -2.05
SNORA40.17-201ENST00000517256 TTC24A2A3L6 582 aaPredicted RBP2.23□□□□□ -2.05
SNORA40.17-201ENST00000517256 K7ELQ4 463 aaPredicted RBP2.23□□□□□ -2.05
SNORA40.17-201ENST00000517256 MARSP56192 900 aaKnown RBP2.23□□□□□ -2.05
SNORA40.17-201ENST00000517256 PTCD2Q8WV60 388 aaKnown RBP2.23□□□□□ -2.05
SNORA40.17-201ENST00000517256 UPF1Q92900 1129 aaKnown RBP eCLIP2.23□□□□□ -2.05
SNORA40.17-201ENST00000517256 MS4A4AQ96JQ5 239 aa2.23□□□□□ -2.05
SNORA40.17-201ENST00000517256 ATP13A2Q9NQ11 1180 aa2.23□□□□□ -2.05
SNORA40.17-201ENST00000517256 KIAA1468Q9P260 1216 aa2.23□□□□□ -2.05
SNORA40.17-201ENST00000517256 SCO2A0A1W2PP80 73 aa2.22□□□□□ -2.05
SNORA40.17-201ENST00000517256 KIF3CO14782 793 aa2.22□□□□□ -2.05
SNORA40.17-201ENST00000517256 CRIPAKQ8N1N5 446 aa2.22□□□□□ -2.05
SNORA40.17-201ENST00000517256 ZDHHC16Q969W1 377 aa2.22□□□□□ -2.05
SNORA40.17-201ENST00000517256 TRIM47Q96LD4 638 aa2.22□□□□□ -2.05
SNORA40.17-201ENST00000517256 KRTAP4-7Q9BYR0 210 aa2.22□□□□□ -2.05
SNORA40.17-201ENST00000517256 PPP1R3GB7ZBB8 358 aa2.21□□□□□ -2.06
SNORA40.17-201ENST00000517256 HDGFP51858 240 aaKnown RBP2.21□□□□□ -2.06
SNORA40.17-201ENST00000517256 FAM98CQ17RN3 349 aaKnown RBP2.21□□□□□ -2.06
SNORA40.17-201ENST00000517256 GOLGA2P5Q9HBQ8 144 aa2.21□□□□□ -2.06
SNORA40.17-201ENST00000517256 GDF9O60383 454 aa2.2□□□□□ -2.06
SNORA40.17-201ENST00000517256 LAMC2Q13753 1193 aa2.2□□□□□ -2.06
SNORA40.17-201ENST00000517256 PLPP6Q8IY26 295 aa2.2□□□□□ -2.06
SNORA40.17-201ENST00000517256 ADAMTS8Q9UP79 889 aa2.2□□□□□ -2.06
SNORA40.17-201ENST00000517256 RNF223E7ERA6 249 aa2.19□□□□□ -2.06
SNORA40.17-201ENST00000517256 KANK3Q6NY19 840 aa2.19□□□□□ -2.06
SNORA40.17-201ENST00000517256 NBPF11Q86T75 865 aa2.19□□□□□ -2.06
SNORA40.17-201ENST00000517256 SVOPQ8N4V2 548 aa2.19□□□□□ -2.06
SNORA40.17-201ENST00000517256 KRTAP4-12Q9BQ66 201 aa2.19□□□□□ -2.06
SNORA40.17-201ENST00000517256 ADAM33Q9BZ11 813 aa2.19□□□□□ -2.06
SNORA40.17-201ENST00000517256 PPEF1O14829 653 aaPredicted RBP2.18□□□□□ -2.06
SNORA40.17-201ENST00000517256 GSK3AP49840 483 aa2.18□□□□□ -2.06
SNORA40.17-201ENST00000517256 FOSBP53539 338 aa2.18□□□□□ -2.06
SNORA40.17-201ENST00000517256 NPAS3Q8IXF0 933 aa2.18□□□□□ -2.06
SNORA40.17-201ENST00000517256 ERBB4Q15303 1308 aa2.17□□□□□ -2.06
SNORA40.17-201ENST00000517256 KDM4FA0A1W2PPD8 638 aa2.17□□□□□ -2.06
SNORA40.17-201ENST00000517256 LCE1DQ5T752 114 aa2.17□□□□□ -2.06
SNORA40.17-201ENST00000517256 LIAT1Q6ZQX7 453 aa2.17□□□□□ -2.06
SNORA40.17-201ENST00000517256 ANKLE1Q8NAG6 615 aa2.17□□□□□ -2.06
SNORA40.17-201ENST00000517256 JPH4Q96JJ6 628 aa2.17□□□□□ -2.06
SNORA40.17-201ENST00000517256 H3BM21 787 aa2.16□□□□□ -2.06
SNORA40.17-201ENST00000517256 AVPP01185 164 aa2.16□□□□□ -2.06
SNORA40.17-201ENST00000517256 YBX3P16989 372 aaKnown RBP eCLIP2.16□□□□□ -2.06
SNORA40.17-201ENST00000517256 SLC4A3P48751 1232 aa2.16□□□□□ -2.06
SNORA40.17-201ENST00000517256 SMCPP49901 116 aaPredicted RBP2.16□□□□□ -2.06
SNORA40.17-201ENST00000517256 LMOD2Q6P5Q4 547 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms