RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 BCORL1Q5H9F3 1711 aa4.52□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 FAM135AQ9P2D6 1515 aa4.52□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 MYBBP1AQ9BQG0 1328 aaKnown RBP4.52□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 ABCC10Q5T3U5 1492 aa4.52□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 PLEKHD1A6NEE1 506 aa4.52□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 ERBINQ96RT1 1412 aa4.52□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 KIAA1210Q9ULL0 1709 aa4.52□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 CDC42BPBQ9Y5S2 1711 aa4.52□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 PRDM15P57071 1507 aaPredicted RBP4.51□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 DUOX2Q9NRD8 1548 aa4.51□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 RNF123Q5XPI4 1314 aa4.51□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 MAGI2Q86UL8 1455 aa4.51□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 RTL5Q5HYW3 569 aaPredicted RBP4.51□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 FAM9BQ8IZU0 186 aa4.51□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 TMC1Q8TDI8 760 aa4.51□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 CHMP7Q8WUX9 453 aaPredicted RBP4.51□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 CCDC136Q96JN2 1154 aa4.51□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 HIRIP3Q9BW71 556 aaPredicted RBP4.51□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 SCAPERQ9BY12 1400 aa4.51□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 CEP152O94986 1710 aa4.51□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 NUP155O75694 1391 aa4.51□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 LRPPRCP42704 1394 aaKnown RBP4.51□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 DHX29Q7Z478 1369 aaKnown RBP4.51□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 ARAP3Q8WWN8 1544 aa4.51□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 ZNF608Q9ULD9 1512 aaPredicted RBP4.51□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 ATP10AO60312 1499 aa4.5□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 PLB1Q6P1J6 1458 aa4.5□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 COL17A1Q9UMD9 1497 aaPredicted RBP4.5□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 SYNMO15061 1565 aa4.5□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 SAMD9LQ8IVG5 1584 aa4.5□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 PRG4Q92954 1404 aaPredicted RBP4.5□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 CDCA8Q53HL2 280 aa4.5□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 NLRP13Q86W25 1043 aa4.5□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 CARD11Q9BXL7 1154 aa4.5□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 NOP58Q9Y2X3 529 aaKnown RBP4.5□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 EIF3AQ14152 1382 aaKnown RBP4.5□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 GPRASP1Q5JY77 1395 aa4.5□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 SPHKAPQ2M3C7 1700 aa4.49□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 MS4A1P11836 297 aa4.49□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 PKD2Q13563 968 aa4.49□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 NGEFQ8N5V2 710 aa4.49□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 USP35Q9P2H5 1018 aa4.49□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 ARHGAP5Q13017 1502 aa4.49□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 CLASP1Q7Z460 1538 aa4.49□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 PARD3Q8TEW0 1356 aa4.49□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 WDR7Q9Y4E6 1490 aa4.49□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 VIRMAQ69YN4 1812 aaKnown RBP4.49□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 KDM5AP29375 1690 aaKnown RBP4.48□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 IQGAP1P46940 1657 aa4.48□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 PRAG1Q86YV5 1406 aa4.48□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 SYCP2Q9BX26 1530 aa4.48□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 TCERG1O14776 1098 aaKnown RBP4.48□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 DDRGK1Q96HY6 314 aa4.48□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 ATP10BO94823 1461 aa4.48□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 TET3O43151 1660 aa4.48□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 BLMP54132 1417 aaPredicted RBP4.47□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 ABCC2Q92887 1545 aa4.47□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 DEPDC5O75140 1603 aa4.47□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 CHD1O14646 1710 aa4.47□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 TMF1P82094 1093 aa4.47□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 NBPF8Q3BBV2 869 aa4.47□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.47□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 NINLQ9Y2I6 1382 aa4.47□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 TTC37Q6PGP7 1564 aa4.47□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 TRPM2O94759 1503 aa4.46□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 KIF1BO60333 1816 aa4.46□□□□□ -1.69
RNU4ATAC3P-201ENST00000516699 CFAP74Q9C0B2 1584 aa4.46□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 NPC1L1Q9UHC9 1359 aa4.46□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 PNISRQ8TF01 805 aaKnown RBP4.46□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 JPH4Q96JJ6 628 aa4.46□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 IPO9Q96P70 1041 aaKnown RBP4.46□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 BCL11AQ9H165 835 aa4.46□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 ZBTB47Q9UFB7 747 aaPredicted RBP4.46□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 ZNF777Q9ULD5 760 aaPredicted RBP4.46□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 MADDQ8WXG6 1647 aa4.46□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 ABCC1P33527 1531 aa4.46□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 RTEL1-TNFRSF6BF6WH68 1400 aa4.46□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 UHRF1BP1LA0JNW5 1464 aa4.45□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 PPM1GO15355 546 aaPredicted RBP4.45□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 RRP1P56182 461 aaKnown RBP4.45□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 AAMPQ13685 434 aa4.45□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 ZNF326Q5BKZ1 582 aaKnown RBP4.45□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 B4GALNT3Q6L9W6 998 aa4.45□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 RCAN3Q9UKA8 241 aa4.45□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 MYO3AQ8NEV4 1616 aa4.45□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.45□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 PIK3C2GO75747 1445 aa4.45□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 ZNF644Q9H582 1327 aaPredicted RBP4.45□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 A2MP01023 1474 aa4.44□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 KANK1Q14678 1352 aa4.44□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 C11orf95C9JLR9 678 aaPredicted RBP4.44□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 IRX6P78412 446 aaPredicted RBP4.44□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 DCAF11Q8TEB1 546 aa4.44□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 POLR3GLQ9BT43 218 aa4.44□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 DAXXQ9UER7 740 aaPredicted RBP4.44□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 ASXL1Q8IXJ9 1541 aa4.44□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 MYOM2P54296 1465 aa4.43□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 SCAF11Q99590 1463 aaKnown RBP4.43□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 ZCCHC11Q5TAX3 1644 aaKnown RBP4.43□□□□□ -1.7
RNU4ATAC3P-201ENST00000516699 USP32Q8NFA0 1604 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms