RNA–Protein interactions for RNA: ENST00000515752.5

SDHA-218, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-218ENST00000515752 INO80Q9ULG1 1556 aaPredicted RBP21.35■■□□□ 1.01
SDHA-218ENST00000515752 CD109Q6YHK3 1445 aa21.33■■□□□ 1.01
SDHA-218ENST00000515752 RALGAPBQ86X10 1494 aa21.33■■□□□ 1.01
SDHA-218ENST00000515752 ZNF518AQ6AHZ1 1483 aa21.32■■□□□ 1
SDHA-218ENST00000515752 KANK1Q14678 1352 aa21.31■■□□□ 1
SDHA-218ENST00000515752 CCDC7Q96M83 1385 aa21.31■■□□□ 1
SDHA-218ENST00000515752 DHX29Q7Z478 1369 aaKnown RBP21.3■■□□□ 1
SDHA-218ENST00000515752 PLA2R1Q13018 1463 aa21.3■■□□□ 1
SDHA-218ENST00000515752 ARID4BQ4LE39 1312 aaPredicted RBP21.3■■□□□ 1
SDHA-218ENST00000515752 DCAF11Q8TEB1 546 aa21.29■■□□□ 1
SDHA-218ENST00000515752 USP47Q96K76 1375 aa21.28■■□□□ 1
SDHA-218ENST00000515752 ZNF326Q5BKZ1 582 aaKnown RBP21.28■■□□□ 1
SDHA-218ENST00000515752 EIF2AK4Q9P2K8 1649 aaKnown RBP21.28■■□□□ 1
SDHA-218ENST00000515752 DEPDC5O75140 1603 aa21.27■■□□□ 1
SDHA-218ENST00000515752 MYT1LQ9UL68 1186 aa21.27■□□□□ 0.99
SDHA-218ENST00000515752 CNTLNQ9NXG0 1405 aa21.25■□□□□ 0.99
SDHA-218ENST00000515752 NEO1Q92859 1461 aa21.24■□□□□ 0.99
SDHA-218ENST00000515752 STAC3Q96MF2 364 aa21.24■□□□□ 0.99
SDHA-218ENST00000515752 CARD11Q9BXL7 1154 aa21.23■□□□□ 0.99
SDHA-218ENST00000515752 GTF3C3Q9Y5Q9 886 aa21.23■□□□□ 0.99
SDHA-218ENST00000515752 KDM2AQ9Y2K7 1162 aa21.22■□□□□ 0.99
SDHA-218ENST00000515752 POGZQ7Z3K3 1410 aa21.22■□□□□ 0.99
SDHA-218ENST00000515752 POLR1AO95602 1720 aaPredicted RBP21.22■□□□□ 0.99
SDHA-218ENST00000515752 MLH3Q9UHC1 1453 aa21.22■□□□□ 0.99
SDHA-218ENST00000515752 KDM5CP41229 1560 aa21.21■□□□□ 0.99
SDHA-218ENST00000515752 VWDEQ8N2E2 1590 aa21.21■□□□□ 0.99
SDHA-218ENST00000515752 PRAG1Q86YV5 1406 aa21.21■□□□□ 0.99
SDHA-218ENST00000515752 C11orf95C9JLR9 678 aaPredicted RBP21.2■□□□□ 0.98
SDHA-218ENST00000515752 KIF3BO15066 747 aa21.2■□□□□ 0.98
SDHA-218ENST00000515752 KIF7Q2M1P5 1343 aa21.2■□□□□ 0.98
SDHA-218ENST00000515752 PTPRTO14522 1441 aa21.2■□□□□ 0.98
SDHA-218ENST00000515752 TET3O43151 1660 aa21.2■□□□□ 0.98
SDHA-218ENST00000515752 PRDM15P57071 1507 aaPredicted RBP21.19■□□□□ 0.98
SDHA-218ENST00000515752 TRPM2O94759 1503 aa21.18■□□□□ 0.98
SDHA-218ENST00000515752 KIDINS220Q9ULH0 1771 aa21.18■□□□□ 0.98
SDHA-218ENST00000515752 ROCK2O75116 1388 aaKnown RBP21.18■□□□□ 0.98
SDHA-218ENST00000515752 A2MP01023 1474 aa21.17■□□□□ 0.98
SDHA-218ENST00000515752 RGL3Q3MIN7 710 aa21.16■□□□□ 0.98
SDHA-218ENST00000515752 E9PCH4 1651 aa21.16■□□□□ 0.98
SDHA-218ENST00000515752 GPRASP1Q5JY77 1395 aa21.15■□□□□ 0.98
SDHA-218ENST00000515752 GLI2P10070 1586 aa21.13■□□□□ 0.97
SDHA-218ENST00000515752 CYB5RLQ6IPT4 315 aa21.13■□□□□ 0.97
SDHA-218ENST00000515752 HECW2Q9P2P5 1572 aa21.12■□□□□ 0.97
SDHA-218ENST00000515752 LMTK2Q8IWU2 1503 aa21.12■□□□□ 0.97
SDHA-218ENST00000515752 TRPM1Q7Z4N2 1603 aa21.12■□□□□ 0.97
SDHA-218ENST00000515752 NEURL4Q96JN8 1562 aa21.12■□□□□ 0.97
SDHA-218ENST00000515752 LAMC1P11047 1609 aa21.12■□□□□ 0.97
SDHA-218ENST00000515752 SPHKAPQ2M3C7 1700 aa21.1■□□□□ 0.97
SDHA-218ENST00000515752 MROH1Q8NDA8 1641 aa21.1■□□□□ 0.97
SDHA-218ENST00000515752 RNF17Q9BXT8 1623 aaKnown RBP21.09■□□□□ 0.97
SDHA-218ENST00000515752 ST20-MTHFSA0A0A6YYL1 179 aa21.08■□□□□ 0.96
SDHA-218ENST00000515752 PRKRIP1Q9H875 184 aaPredicted RBP21.08■□□□□ 0.96
SDHA-218ENST00000515752 RIMBP3CA6NJZ7 1639 aa21.08■□□□□ 0.96
SDHA-218ENST00000515752 RIMBP3BA6NNM3 1639 aa21.08■□□□□ 0.96
SDHA-218ENST00000515752 RIMBP3Q9UFD9 1639 aa21.08■□□□□ 0.96
SDHA-218ENST00000515752 MAP3K4Q9Y6R4 1608 aa21.08■□□□□ 0.96
SDHA-218ENST00000515752 BCORL1Q5H9F3 1711 aa21.06■□□□□ 0.96
SDHA-218ENST00000515752 EFCAB6Q5THR3 1501 aa21.06■□□□□ 0.96
SDHA-218ENST00000515752 CEP152O94986 1710 aa21.05■□□□□ 0.96
SDHA-218ENST00000515752 CLTCL1P53675 1640 aa21.02■□□□□ 0.96
SDHA-218ENST00000515752 FRMPD1Q5SYB0 1578 aa21.02■□□□□ 0.95
SDHA-218ENST00000515752 NBPF1Q3BBV0 1214 aa21.01■□□□□ 0.95
SDHA-218ENST00000515752 RAPGEF3O95398 923 aa20.99■□□□□ 0.95
SDHA-218ENST00000515752 ABCA6Q8N139 1617 aa20.98■□□□□ 0.95
SDHA-218ENST00000515752 PPRC1Q5VV67 1664 aaKnown RBP20.97■□□□□ 0.95
SDHA-218ENST00000515752 POLR3GLQ9BT43 218 aa20.97■□□□□ 0.95
SDHA-218ENST00000515752 KTN1Q86UP2 1357 aaKnown RBP20.96■□□□□ 0.95
SDHA-218ENST00000515752 MADDQ8WXG6 1647 aa20.96■□□□□ 0.95
SDHA-218ENST00000515752 FAM69CQ0P6D2 419 aa20.96■□□□□ 0.95
SDHA-218ENST00000515752 RICTORQ6R327 1708 aa20.95■□□□□ 0.95
SDHA-218ENST00000515752 WASHC2CQ9Y4E1 1318 aa20.95■□□□□ 0.95
SDHA-218ENST00000515752 GGT6Q6P531 493 aa20.95■□□□□ 0.94
SDHA-218ENST00000515752 MYOM2P54296 1465 aa20.94■□□□□ 0.94
SDHA-218ENST00000515752 DIP2CQ9Y2E4 1556 aa20.94■□□□□ 0.94
SDHA-218ENST00000515752 DIP2BQ9P265 1576 aa20.94■□□□□ 0.94
SDHA-218ENST00000515752 SLC24A1O60721 1099 aa20.93■□□□□ 0.94
SDHA-218ENST00000515752 TMF1P82094 1093 aa20.92■□□□□ 0.94
SDHA-218ENST00000515752 NPATQ14207 1427 aa20.92■□□□□ 0.94
SDHA-218ENST00000515752 ABCC3O15438 1527 aa20.92■□□□□ 0.94
SDHA-218ENST00000515752 TESK2Q96S53 571 aa20.91■□□□□ 0.94
SDHA-218ENST00000515752 MRS2Q9HD23 443 aa20.91■□□□□ 0.94
SDHA-218ENST00000515752 COL17A1Q9UMD9 1497 aaPredicted RBP20.91■□□□□ 0.94
SDHA-218ENST00000515752 ZMYM4Q5VZL5 1548 aa20.91■□□□□ 0.94
SDHA-218ENST00000515752 KIF1BO60333 1816 aa20.9■□□□□ 0.94
SDHA-218ENST00000515752 KIAA1210Q9ULL0 1709 aa20.9■□□□□ 0.94
SDHA-218ENST00000515752 SCAF11Q99590 1463 aaKnown RBP20.9■□□□□ 0.94
SDHA-218ENST00000515752 ARHGAP31Q2M1Z3 1444 aa20.89■□□□□ 0.93
SDHA-218ENST00000515752 EIF3AQ14152 1382 aaKnown RBP20.89■□□□□ 0.93
SDHA-218ENST00000515752 CDCA8Q53HL2 280 aa20.88■□□□□ 0.93
SDHA-218ENST00000515752 RPGRIP1LQ68CZ1 1315 aa20.88■□□□□ 0.93
SDHA-218ENST00000515752 RALBP1Q15311 655 aa20.88■□□□□ 0.93
SDHA-218ENST00000515752 ZC3H13Q5T200 1668 aaKnown RBP20.87■□□□□ 0.93
SDHA-218ENST00000515752 ADGRB3O60242 1522 aa20.86■□□□□ 0.93
SDHA-218ENST00000515752 HNRNPUQ00839 825 aaKnown RBP eCLIP20.85■□□□□ 0.93
SDHA-218ENST00000515752 NOS1P29475 1434 aa20.85■□□□□ 0.93
SDHA-218ENST00000515752 IQGAP1P46940 1657 aa20.84■□□□□ 0.93
SDHA-218ENST00000515752 UGGT1Q9NYU2 1555 aa20.84■□□□□ 0.93
SDHA-218ENST00000515752 NRXN1Q9ULB1 1477 aa20.84■□□□□ 0.93
SDHA-218ENST00000515752 PPP6R1Q9UPN7 881 aa20.84■□□□□ 0.93
SDHA-218ENST00000515752 CAMSAP1Q5T5Y3 1602 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms