RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 AEBP2Q6ZN18 517 aaPredicted RBP20.05■□□□□ 0.8
TRIM41-207ENST00000515223 JPH4Q96JJ6 628 aa20.05■□□□□ 0.8
TRIM41-207ENST00000515223 EVA1CP58658 441 aa20.04■□□□□ 0.8
TRIM41-207ENST00000515223 SMC4Q9NTJ3 1288 aa20.04■□□□□ 0.8
TRIM41-207ENST00000515223 KIF21BO75037 1637 aa20.04■□□□□ 0.8
TRIM41-207ENST00000515223 SLC4A10Q6U841 1118 aa20.03■□□□□ 0.8
TRIM41-207ENST00000515223 GZF1Q9H116 711 aaPredicted RBP20.02■□□□□ 0.79
TRIM41-207ENST00000515223 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.01■□□□□ 0.79
TRIM41-207ENST00000515223 SLC4A3P48751 1232 aa20.01■□□□□ 0.79
TRIM41-207ENST00000515223 ZBED9Q6R2W3 1325 aa20.01■□□□□ 0.79
TRIM41-207ENST00000515223 TRIM6-TRIM34B2RNG4 842 aa20.01■□□□□ 0.79
TRIM41-207ENST00000515223 CYB5RLQ6IPT4 315 aa20■□□□□ 0.79
TRIM41-207ENST00000515223 EXOC6Q8TAG9 804 aa20■□□□□ 0.79
TRIM41-207ENST00000515223 PMFBP1Q8TBY8 1022 aa20■□□□□ 0.79
TRIM41-207ENST00000515223 RASSF8Q8NHQ8 419 aa19.99■□□□□ 0.79
TRIM41-207ENST00000515223 TOMM22Q9NS69 142 aa19.99■□□□□ 0.79
TRIM41-207ENST00000515223 MSH5O43196 834 aa19.99■□□□□ 0.79
TRIM41-207ENST00000515223 PLIN1O60240 522 aa19.99■□□□□ 0.79
TRIM41-207ENST00000515223 HSP90B1P14625 803 aaKnown RBP19.99■□□□□ 0.79
TRIM41-207ENST00000515223 CCDC18Q5T9S5 1454 aa19.98■□□□□ 0.79
TRIM41-207ENST00000515223 PTMSP20962 102 aa19.98■□□□□ 0.79
TRIM41-207ENST00000515223 GBP4Q96PP9 640 aa19.98■□□□□ 0.79
TRIM41-207ENST00000515223 TRAK1Q9UPV9 953 aa19.98■□□□□ 0.79
TRIM41-207ENST00000515223 PDE4AP27815 886 aa19.97■□□□□ 0.79
TRIM41-207ENST00000515223 C1orf141Q5JVX7 400 aa19.97■□□□□ 0.79
TRIM41-207ENST00000515223 MSNP26038 577 aaKnown RBP19.97■□□□□ 0.79
TRIM41-207ENST00000515223 VGFO15240 615 aaPredicted RBP19.96■□□□□ 0.79
TRIM41-207ENST00000515223 TPM4P67936 248 aa19.96■□□□□ 0.79
TRIM41-207ENST00000515223 MARCH6O60337 910 aa19.95■□□□□ 0.78
TRIM41-207ENST00000515223 OSCARQ8IYS5 282 aa19.94■□□□□ 0.78
TRIM41-207ENST00000515223 COG3Q96JB2 828 aa19.93■□□□□ 0.78
TRIM41-207ENST00000515223 SYAP1Q96A49 352 aaPredicted RBP19.93■□□□□ 0.78
TRIM41-207ENST00000515223 MEX3CQ5U5Q3 659 aaKnown RBP19.92■□□□□ 0.78
TRIM41-207ENST00000515223 CCDC146Q8IYE0 955 aa19.92■□□□□ 0.78
TRIM41-207ENST00000515223 KIF3AQ9Y496 699 aa19.92■□□□□ 0.78
TRIM41-207ENST00000515223 CADPSQ9ULU8 1353 aa19.92■□□□□ 0.78
TRIM41-207ENST00000515223 PRM3Q9NNZ6 103 aa19.92■□□□□ 0.78
TRIM41-207ENST00000515223 UACAQ9BZF9 1416 aa19.92■□□□□ 0.78
TRIM41-207ENST00000515223 RRP1P56182 461 aaKnown RBP19.92■□□□□ 0.78
TRIM41-207ENST00000515223 TEFQ10587 303 aa19.91■□□□□ 0.78
TRIM41-207ENST00000515223 VPS53Q5VIR6 699 aa19.91■□□□□ 0.78
TRIM41-207ENST00000515223 NOC3LQ8WTT2 800 aaKnown RBP19.91■□□□□ 0.78
TRIM41-207ENST00000515223 NLRP13Q86W25 1043 aa19.91■□□□□ 0.78
TRIM41-207ENST00000515223 TTC5Q8N0Z6 440 aa19.89■□□□□ 0.77
TRIM41-207ENST00000515223 PHLDB1Q86UU1 1377 aa19.89■□□□□ 0.77
TRIM41-207ENST00000515223 CENPJQ9HC77 1338 aaPredicted RBP19.88■□□□□ 0.77
TRIM41-207ENST00000515223 CSPP1Q1MSJ5 1256 aa19.88■□□□□ 0.77
TRIM41-207ENST00000515223 ATAD2BQ9ULI0 1458 aa19.88■□□□□ 0.77
TRIM41-207ENST00000515223 KIF15Q9NS87 1388 aa19.87■□□□□ 0.77
TRIM41-207ENST00000515223 MYBBP1AQ9BQG0 1328 aaKnown RBP19.87■□□□□ 0.77
TRIM41-207ENST00000515223 CLUAP1Q96AJ1 413 aa19.87■□□□□ 0.77
TRIM41-207ENST00000515223 CRBNQ96SW2 442 aa19.87■□□□□ 0.77
TRIM41-207ENST00000515223 ST20-MTHFSA0A0A6YYL1 179 aa19.87■□□□□ 0.77
TRIM41-207ENST00000515223 EVC2Q86UK5 1308 aa19.86■□□□□ 0.77
TRIM41-207ENST00000515223 PTPRGP23470 1445 aa19.86■□□□□ 0.77
TRIM41-207ENST00000515223 NOL10Q9BSC4 688 aaKnown RBP19.86■□□□□ 0.77
TRIM41-207ENST00000515223 NEXNQ0ZGT2 675 aa19.86■□□□□ 0.77
TRIM41-207ENST00000515223 CEP89Q96ST8 783 aa19.85■□□□□ 0.77
TRIM41-207ENST00000515223 CHMP4CQ96CF2 233 aa19.85■□□□□ 0.77
TRIM41-207ENST00000515223 CCDC144AA2RUR9 1427 aa19.85■□□□□ 0.77
TRIM41-207ENST00000515223 PDE3BQ13370 1112 aa19.84■□□□□ 0.77
TRIM41-207ENST00000515223 LRRFIP1Q32MZ4 808 aaKnown RBP19.84■□□□□ 0.77
TRIM41-207ENST00000515223 AMOTL1Q8IY63 956 aa19.84■□□□□ 0.77
TRIM41-207ENST00000515223 MFAP1P55081 439 aaKnown RBP19.83■□□□□ 0.77
TRIM41-207ENST00000515223 TRIM34Q9BYJ4 488 aa19.83■□□□□ 0.77
TRIM41-207ENST00000515223 GSE1Q14687 1217 aa19.83■□□□□ 0.77
TRIM41-207ENST00000515223 USP35Q9P2H5 1018 aa19.83■□□□□ 0.77
TRIM41-207ENST00000515223 WASHC2AQ641Q2 1341 aa19.83■□□□□ 0.76
TRIM41-207ENST00000515223 PSME1Q06323 249 aa19.82■□□□□ 0.76
TRIM41-207ENST00000515223 CGNL1Q0VF96 1302 aa19.82■□□□□ 0.76
TRIM41-207ENST00000515223 KIF16BQ96L93 1317 aa19.82■□□□□ 0.76
TRIM41-207ENST00000515223 CTDP1Q9Y5B0 961 aaPredicted RBP19.82■□□□□ 0.76
TRIM41-207ENST00000515223 USP47Q96K76 1375 aa19.82■□□□□ 0.76
TRIM41-207ENST00000515223 AKAP17AQ02040 695 aaKnown RBP19.81■□□□□ 0.76
TRIM41-207ENST00000515223 SF3A1Q15459 793 aaKnown RBP19.81■□□□□ 0.76
TRIM41-207ENST00000515223 CCDC7Q96M83 1385 aa19.8■□□□□ 0.76
TRIM41-207ENST00000515223 GOLGA6L3A6NEY3 463 aa19.8■□□□□ 0.76
TRIM41-207ENST00000515223 SYTL4Q96C24 671 aaPredicted RBP19.8■□□□□ 0.76
TRIM41-207ENST00000515223 CNTLNQ9NXG0 1405 aa19.8■□□□□ 0.76
TRIM41-207ENST00000515223 ARAP1Q96P48 1450 aa19.79■□□□□ 0.76
TRIM41-207ENST00000515223 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.79■□□□□ 0.76
TRIM41-207ENST00000515223 KIF7Q2M1P5 1343 aa19.79■□□□□ 0.76
TRIM41-207ENST00000515223 RRBP1Q9P2E9 1410 aaKnown RBP19.79■□□□□ 0.76
TRIM41-207ENST00000515223 CREBRFQ8IUR6 639 aa19.78■□□□□ 0.76
TRIM41-207ENST00000515223 ST18O60284 1047 aa19.78■□□□□ 0.76
TRIM41-207ENST00000515223 ARID3AQ99856 593 aa19.78■□□□□ 0.76
TRIM41-207ENST00000515223 MINK1Q8N4C8 1332 aaPredicted RBP19.78■□□□□ 0.76
TRIM41-207ENST00000515223 LRRC9Q6ZRR7 1453 aa19.77■□□□□ 0.76
TRIM41-207ENST00000515223 SYNE3Q6ZMZ3 975 aa19.77■□□□□ 0.76
TRIM41-207ENST00000515223 FAM161AQ3B820 660 aa19.77■□□□□ 0.76
TRIM41-207ENST00000515223 ATF3P18847 181 aa19.77■□□□□ 0.76
TRIM41-207ENST00000515223 PANK3Q9H999 370 aa19.77■□□□□ 0.75
TRIM41-207ENST00000515223 TCEAL9Q9UHQ7 104 aa19.77■□□□□ 0.75
TRIM41-207ENST00000515223 FAM69CQ0P6D2 419 aa19.76■□□□□ 0.75
TRIM41-207ENST00000515223 SYNJ1O43426 1573 aa19.76■□□□□ 0.75
TRIM41-207ENST00000515223 CENPQQ7L2Z9 268 aaPredicted RBP19.76■□□□□ 0.75
TRIM41-207ENST00000515223 NOL8Q76FK4 1167 aaKnown RBP19.75■□□□□ 0.75
TRIM41-207ENST00000515223 NGEFQ8N5V2 710 aa19.75■□□□□ 0.75
TRIM41-207ENST00000515223 FOXD4L1Q9NU39 408 aa19.75■□□□□ 0.75
TRIM41-207ENST00000515223 ELL2O00472 640 aaPredicted RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms