RNA–Protein interactions for RNA: ENST00000515127.1

AC004053.1-201, humanhuman

TSL 5 BASIC

Gene AC004053.1, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004053.1-201ENST00000515127 IFFO2Q5TF58 517 aa8.41□□□□□ -1.06
AC004053.1-201ENST00000515127 VSIG10Q8N0Z9 540 aa8.41□□□□□ -1.06
AC004053.1-201ENST00000515127 DDX27Q96GQ7 796 aaKnown RBP8.41□□□□□ -1.06
AC004053.1-201ENST00000515127 A0A0G2JS52 829 aa8.38□□□□□ -1.07
AC004053.1-201ENST00000515127 KDM2AQ9Y2K7 1162 aa8.38□□□□□ -1.07
AC004053.1-201ENST00000515127 ANKK1Q8NFD2 765 aa8.37□□□□□ -1.07
AC004053.1-201ENST00000515127 PPP1R3GB7ZBB8 358 aa8.35□□□□□ -1.07
AC004053.1-201ENST00000515127 PROX2Q3B8N5 592 aa8.35□□□□□ -1.07
AC004053.1-201ENST00000515127 CADPS2Q86UW7 1296 aa8.35□□□□□ -1.07
AC004053.1-201ENST00000515127 RABGEF1Q9UJ41 708 aa8.35□□□□□ -1.07
AC004053.1-201ENST00000515127 PCDHGA10Q9Y5H3 936 aa8.34□□□□□ -1.07
AC004053.1-201ENST00000515127 COL9A1P20849 921 aa8.32□□□□□ -1.08
AC004053.1-201ENST00000515127 BCAMP50895 628 aa8.32□□□□□ -1.08
AC004053.1-201ENST00000515127 TYW1BQ6NUM6 668 aa8.32□□□□□ -1.08
AC004053.1-201ENST00000515127 EMILIN3Q9NT22 766 aa8.32□□□□□ -1.08
AC004053.1-201ENST00000515127 KIAA1468Q9P260 1216 aa8.32□□□□□ -1.08
AC004053.1-201ENST00000515127 FBXW7Q969H0 707 aa8.31□□□□□ -1.08
AC004053.1-201ENST00000515127 PHF14O94880 888 aa8.3□□□□□ -1.08
AC004053.1-201ENST00000515127 MFSD10Q14728 455 aa8.3□□□□□ -1.08
AC004053.1-201ENST00000515127 SOWAHBA6NEL2 793 aa8.29□□□□□ -1.08
AC004053.1-201ENST00000515127 LAPTM4BQ86VI4 370 aa8.29□□□□□ -1.08
AC004053.1-201ENST00000515127 ZFRQ96KR1 1074 aaKnown RBP8.29□□□□□ -1.08
AC004053.1-201ENST00000515127 KCNC4Q03721 635 aa8.27□□□□□ -1.09
AC004053.1-201ENST00000515127 C6orf132Q5T0Z8 1188 aa8.27□□□□□ -1.09
AC004053.1-201ENST00000515127 WBP1LQ9NX94 342 aa8.27□□□□□ -1.09
AC004053.1-201ENST00000515127 SEPT9Q9UHD8 586 aaPredicted RBP8.27□□□□□ -1.09
AC004053.1-201ENST00000515127 ITGBL1O95965 494 aaPredicted RBP8.26□□□□□ -1.09
AC004053.1-201ENST00000515127 Q6ZNB5 142 aa8.26□□□□□ -1.09
AC004053.1-201ENST00000515127 RBM33Q96EV2 1170 aaKnown RBP8.26□□□□□ -1.09
AC004053.1-201ENST00000515127 ONECUT3O60422 494 aaPredicted RBP8.25□□□□□ -1.09
AC004053.1-201ENST00000515127 NYAP1Q6ZVC0 841 aa8.25□□□□□ -1.09
AC004053.1-201ENST00000515127 EPAS1Q99814 870 aa8.25□□□□□ -1.09
AC004053.1-201ENST00000515127 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.22□□□□□ -1.09
AC004053.1-201ENST00000515127 TRIM6-TRIM34B2RNG4 842 aa8.21□□□□□ -1.1
AC004053.1-201ENST00000515127 DPYSL4O14531 572 aa8.21□□□□□ -1.1
AC004053.1-201ENST00000515127 FAM98CQ17RN3 349 aaKnown RBP8.21□□□□□ -1.1
AC004053.1-201ENST00000515127 DDX12PQ92771 950 aa8.21□□□□□ -1.1
AC004053.1-201ENST00000515127 LRCH3Q96II8 777 aa8.21□□□□□ -1.1
AC004053.1-201ENST00000515127 TSR3Q9UJK0 312 aaKnown RBP8.21□□□□□ -1.1
AC004053.1-201ENST00000515127 HPS5Q9UPZ3 1129 aa8.21□□□□□ -1.1
AC004053.1-201ENST00000515127 PACS2Q86VP3 889 aa8.2□□□□□ -1.1
AC004053.1-201ENST00000515127 PPP4CP60510 307 aa8.18□□□□□ -1.1
AC004053.1-201ENST00000515127 MAP3K7O43318 606 aa8.16□□□□□ -1.1
AC004053.1-201ENST00000515127 CAMK2BQ13554 666 aa8.16□□□□□ -1.1
AC004053.1-201ENST00000515127 GFRA3O60609 400 aa8.15□□□□□ -1.1
AC004053.1-201ENST00000515127 NBR1Q14596 966 aa8.15□□□□□ -1.1
AC004053.1-201ENST00000515127 LAPTM4AQ15012 233 aa8.14□□□□□ -1.11
AC004053.1-201ENST00000515127 WDR70Q9NW82 654 aa8.14□□□□□ -1.11
AC004053.1-201ENST00000515127 KCNV2Q8TDN2 545 aa8.13□□□□□ -1.11
AC004053.1-201ENST00000515127 TSR1Q2NL82 804 aaKnown RBP8.12□□□□□ -1.11
AC004053.1-201ENST00000515127 P3H3Q8IVL6 736 aa8.12□□□□□ -1.11
AC004053.1-201ENST00000515127 TSKSQ9UJT2 592 aa8.12□□□□□ -1.11
AC004053.1-201ENST00000515127 ARIH1Q9Y4X5 557 aaPredicted RBP8.12□□□□□ -1.11
AC004053.1-201ENST00000515127 SMAPO00193 183 aa8.11□□□□□ -1.11
AC004053.1-201ENST00000515127 E2F4Q16254 413 aa8.11□□□□□ -1.11
AC004053.1-201ENST00000515127 TRAF7Q6Q0C0 670 aa8.11□□□□□ -1.11
AC004053.1-201ENST00000515127 HDGFP51858 240 aaKnown RBP8.1□□□□□ -1.11
AC004053.1-201ENST00000515127 EN1Q05925 392 aaPredicted RBP8.1□□□□□ -1.11
AC004053.1-201ENST00000515127 SAMD7Q7Z3H4 446 aa8.1□□□□□ -1.11
AC004053.1-201ENST00000515127 PRKD2Q9BZL6 878 aa8.1□□□□□ -1.11
AC004053.1-201ENST00000515127 CDCA7LQ96GN5 454 aa8.09□□□□□ -1.11
AC004053.1-201ENST00000515127 PRSS12P56730 875 aa8.08□□□□□ -1.12
AC004053.1-201ENST00000515127 ARHGEF1Q92888 912 aaKnown RBP8.08□□□□□ -1.12
AC004053.1-201ENST00000515127 BCANQ96GW7 911 aa8.08□□□□□ -1.12
AC004053.1-201ENST00000515127 GRXCR2A6NFK2 248 aa8.07□□□□□ -1.12
AC004053.1-201ENST00000515127 RNF40O75150 1001 aa8.07□□□□□ -1.12
AC004053.1-201ENST00000515127 TJAP1Q5JTD0 557 aa8.07□□□□□ -1.12
AC004053.1-201ENST00000515127 PNMA3Q9UL41 463 aa8.07□□□□□ -1.12
AC004053.1-201ENST00000515127 SPDYE16A6NNV3 312 aaPredicted RBP8.06□□□□□ -1.12
AC004053.1-201ENST00000515127 PPP1R18Q6NYC8 613 aa8.06□□□□□ -1.12
AC004053.1-201ENST00000515127 TATDN2Q93075 761 aa8.06□□□□□ -1.12
AC004053.1-201ENST00000515127 IL21Q9HBE4 155 aa8.06□□□□□ -1.12
AC004053.1-201ENST00000515127 CERKQ8TCT0 537 aa8.05□□□□□ -1.12
AC004053.1-201ENST00000515127 MTRQ99707 1265 aa8.05□□□□□ -1.12
AC004053.1-201ENST00000515127 NBPF26B4DH59 902 aa8.03□□□□□ -1.12
AC004053.1-201ENST00000515127 PDIA6Q15084 440 aa8.03□□□□□ -1.12
AC004053.1-201ENST00000515127 ZNF516Q92618 1163 aa8.03□□□□□ -1.12
AC004053.1-201ENST00000515127 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.03□□□□□ -1.12
AC004053.1-201ENST00000515127 FAM198AQ9UFP1 575 aa8.03□□□□□ -1.12
AC004053.1-201ENST00000515127 NRG2O14511 850 aaPredicted RBP8.02□□□□□ -1.13
AC004053.1-201ENST00000515127 NUDT18Q6ZVK8 323 aa8.02□□□□□ -1.13
AC004053.1-201ENST00000515127 C3orf80F5H4A9 247 aa8□□□□□ -1.13
AC004053.1-201ENST00000515127 V9GY48 417 aaPredicted RBP8□□□□□ -1.13
AC004053.1-201ENST00000515127 LCE2BO14633 110 aa7.99□□□□□ -1.13
AC004053.1-201ENST00000515127 NKX2-3Q8TAU0 364 aa7.99□□□□□ -1.13
AC004053.1-201ENST00000515127 GGCXP38435 758 aa7.98□□□□□ -1.13
AC004053.1-201ENST00000515127 PRIM1P49642 420 aaKnown RBP7.98□□□□□ -1.13
AC004053.1-201ENST00000515127 APLP1P51693 650 aa7.98□□□□□ -1.13
AC004053.1-201ENST00000515127 ZNF787Q6DD87 383 aa7.98□□□□□ -1.13
AC004053.1-201ENST00000515127 PDZRN3Q9UPQ7 1066 aa7.98□□□□□ -1.13
AC004053.1-201ENST00000515127 COPS2P61201 443 aa7.97□□□□□ -1.13
AC004053.1-201ENST00000515127 NECTIN2Q92692 538 aa7.97□□□□□ -1.13
AC004053.1-201ENST00000515127 SLC4A3P48751 1232 aa7.96□□□□□ -1.14
AC004053.1-201ENST00000515127 TESPA1A2RU30 521 aaPredicted RBP7.95□□□□□ -1.14
AC004053.1-201ENST00000515127 CDHR5Q9HBB8 845 aa7.95□□□□□ -1.14
AC004053.1-201ENST00000515127 SEMA3EO15041 775 aa7.94□□□□□ -1.14
AC004053.1-201ENST00000515127 OSBPP22059 807 aa7.94□□□□□ -1.14
AC004053.1-201ENST00000515127 SWT1Q5T5J6 900 aaKnown RBP7.94□□□□□ -1.14
AC004053.1-201ENST00000515127 SLF2Q8IX21 1173 aa7.94□□□□□ -1.14
AC004053.1-201ENST00000515127 PADI6Q6TGC4 694 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms