RNA–Protein interactions for RNA: ENST00000513367.1

SRPK1-213, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-213ENST00000513367 DMRTA1Q5VZB9 504 aa11.9□□□□□ -0.5
SRPK1-213ENST00000513367 CCDC88BA6NC98 1476 aa11.89□□□□□ -0.51
SRPK1-213ENST00000513367 SYNJ2O15056 1496 aa11.89□□□□□ -0.51
SRPK1-213ENST00000513367 BCL11BQ9C0K0 894 aaPredicted RBP11.88□□□□□ -0.51
SRPK1-213ENST00000513367 PSEN2P49810 448 aa11.87□□□□□ -0.51
SRPK1-213ENST00000513367 FAM69CQ0P6D2 419 aa11.86□□□□□ -0.51
SRPK1-213ENST00000513367 KCTD12Q96CX2 325 aaKnown RBP11.86□□□□□ -0.51
SRPK1-213ENST00000513367 GRIN2BQ13224 1484 aa11.86□□□□□ -0.51
SRPK1-213ENST00000513367 TK2O00142 265 aa11.84□□□□□ -0.51
SRPK1-213ENST00000513367 WDR97A6NE52 1622 aa11.84□□□□□ -0.51
SRPK1-213ENST00000513367 KDM6BO15054 1643 aa11.84□□□□□ -0.51
SRPK1-213ENST00000513367 HECW2Q9P2P5 1572 aa11.83□□□□□ -0.52
SRPK1-213ENST00000513367 FBXO41Q8TF61 875 aa11.82□□□□□ -0.52
SRPK1-213ENST00000513367 STK24Q9Y6E0 443 aa11.82□□□□□ -0.52
SRPK1-213ENST00000513367 PBRM1Q86U86 1689 aa11.81□□□□□ -0.52
SRPK1-213ENST00000513367 CEP170Q5SW79 1584 aa11.8□□□□□ -0.52
SRPK1-213ENST00000513367 FGD5Q6ZNL6 1462 aa11.8□□□□□ -0.52
SRPK1-213ENST00000513367 TSPOAP1O95153 1857 aa11.8□□□□□ -0.52
SRPK1-213ENST00000513367 ABCC10Q5T3U5 1492 aa11.79□□□□□ -0.52
SRPK1-213ENST00000513367 TMC2Q8TDI7 906 aa11.79□□□□□ -0.52
SRPK1-213ENST00000513367 PSDA5PKW4 1024 aaPredicted RBP11.78□□□□□ -0.52
SRPK1-213ENST00000513367 ADGRL1O94910 1474 aa11.76□□□□□ -0.53
SRPK1-213ENST00000513367 DIP2BQ9P265 1576 aa11.75□□□□□ -0.53
SRPK1-213ENST00000513367 PTPN5P54829 565 aa11.74□□□□□ -0.53
SRPK1-213ENST00000513367 SHROOM2Q13796 1616 aa11.72□□□□□ -0.53
SRPK1-213ENST00000513367 LMTK3Q96Q04 1460 aa11.72□□□□□ -0.53
SRPK1-213ENST00000513367 IRX2Q9BZI1 471 aaPredicted RBP11.72□□□□□ -0.53
SRPK1-213ENST00000513367 GRIN2AQ12879 1464 aa11.71□□□□□ -0.53
SRPK1-213ENST00000513367 PTCD2Q8WV60 388 aaKnown RBP11.71□□□□□ -0.53
SRPK1-213ENST00000513367 STK25O00506 426 aa11.7□□□□□ -0.54
SRPK1-213ENST00000513367 STAC3Q96MF2 364 aa11.7□□□□□ -0.54
SRPK1-213ENST00000513367 PPP1R37O75864 691 aa11.69□□□□□ -0.54
SRPK1-213ENST00000513367 MAPKBP1O60336 1514 aa11.69□□□□□ -0.54
SRPK1-213ENST00000513367 PPP4R3BQ5MIZ7 849 aa11.68□□□□□ -0.54
SRPK1-213ENST00000513367 KCNK17Q96T54 332 aa11.68□□□□□ -0.54
SRPK1-213ENST00000513367 CUX1P39880 1505 aa11.68□□□□□ -0.54
SRPK1-213ENST00000513367 NUP160Q12769 1436 aa11.68□□□□□ -0.54
SRPK1-213ENST00000513367 RGS20O76081 388 aa11.67□□□□□ -0.54
SRPK1-213ENST00000513367 PRG4Q92954 1404 aaPredicted RBP11.67□□□□□ -0.54
SRPK1-213ENST00000513367 VPS9D1Q9Y2B5 631 aa11.66□□□□□ -0.54
SRPK1-213ENST00000513367 ABCA5Q8WWZ7 1642 aa11.65□□□□□ -0.54
SRPK1-213ENST00000513367 IFFO2Q5TF58 517 aa11.65□□□□□ -0.54
SRPK1-213ENST00000513367 TAOK2Q9UL54 1235 aa11.65□□□□□ -0.54
SRPK1-213ENST00000513367 A0A0G2JS52 829 aa11.64□□□□□ -0.55
SRPK1-213ENST00000513367 SOCS7O14512 581 aa11.64□□□□□ -0.55
SRPK1-213ENST00000513367 ILDR2Q71H61 639 aa11.63□□□□□ -0.55
SRPK1-213ENST00000513367 ADCY10Q96PN6 1610 aa11.62□□□□□ -0.55
SRPK1-213ENST00000513367 ADAMTS12P58397 1594 aa11.62□□□□□ -0.55
SRPK1-213ENST00000513367 PLPP6Q8IY26 295 aa11.61□□□□□ -0.55
SRPK1-213ENST00000513367 JPH4Q96JJ6 628 aa11.61□□□□□ -0.55
SRPK1-213ENST00000513367 ABCA10Q8WWZ4 1543 aa11.6□□□□□ -0.55
SRPK1-213ENST00000513367 THSD4Q6ZMP0 1018 aa11.6□□□□□ -0.55
SRPK1-213ENST00000513367 FOXK1P85037 733 aa11.58□□□□□ -0.56
SRPK1-213ENST00000513367 PPRC1Q5VV67 1664 aaKnown RBP11.57□□□□□ -0.56
SRPK1-213ENST00000513367 FHAD1B1AJZ9 1412 aa11.55□□□□□ -0.56
SRPK1-213ENST00000513367 BHMG1C9JSJ3 638 aaPredicted RBP11.55□□□□□ -0.56
SRPK1-213ENST00000513367 KCNH8Q96L42 1107 aa11.55□□□□□ -0.56
SRPK1-213ENST00000513367 DSG2Q14126 1118 aa11.54□□□□□ -0.56
SRPK1-213ENST00000513367 COL17A1Q9UMD9 1497 aaPredicted RBP11.54□□□□□ -0.56
SRPK1-213ENST00000513367 DISP3Q9P2K9 1392 aa11.54□□□□□ -0.56
SRPK1-213ENST00000513367 TBC1D12O60347 775 aa11.51□□□□□ -0.57
SRPK1-213ENST00000513367 SLC4A5Q9BY07 1137 aa11.51□□□□□ -0.57
SRPK1-213ENST00000513367 GPHNQ9NQX3 736 aaPredicted RBP11.51□□□□□ -0.57
SRPK1-213ENST00000513367 TOP2BQ02880 1626 aa11.5□□□□□ -0.57
SRPK1-213ENST00000513367 ZNF454Q8N9F8 522 aa11.5□□□□□ -0.57
SRPK1-213ENST00000513367 WNT2BQ93097 391 aa11.5□□□□□ -0.57
SRPK1-213ENST00000513367 BCL2L12Q9HB09 334 aa11.49□□□□□ -0.57
SRPK1-213ENST00000513367 RGL2O15211 777 aa11.47□□□□□ -0.57
SRPK1-213ENST00000513367 ECM2O94769 699 aaPredicted RBP11.47□□□□□ -0.57
SRPK1-213ENST00000513367 ZBED2Q9BTP6 218 aa11.47□□□□□ -0.57
SRPK1-213ENST00000513367 GLI2P10070 1586 aa11.46□□□□□ -0.57
SRPK1-213ENST00000513367 RUSC2Q8N2Y8 1516 aa11.46□□□□□ -0.57
SRPK1-213ENST00000513367 GOLGA8CPA6NN73 597 aa11.46□□□□□ -0.57
SRPK1-213ENST00000513367 Q6ZNB5 142 aa11.46□□□□□ -0.57
SRPK1-213ENST00000513367 TTBK1Q5TCY1 1321 aaPredicted RBP11.45□□□□□ -0.58
SRPK1-213ENST00000513367 MRPL50Q8N5N7 158 aaKnown RBP11.45□□□□□ -0.58
SRPK1-213ENST00000513367 OXER1Q8TDS5 423 aa11.45□□□□□ -0.58
SRPK1-213ENST00000513367 UPF1Q92900 1129 aaKnown RBP eCLIP11.45□□□□□ -0.58
SRPK1-213ENST00000513367 ASXL2Q76L83 1435 aa11.44□□□□□ -0.58
SRPK1-213ENST00000513367 ERICH3Q5RHP9 1530 aa11.43□□□□□ -0.58
SRPK1-213ENST00000513367 WRNQ14191 1432 aaPredicted RBP eCLIP11.43□□□□□ -0.58
SRPK1-213ENST00000513367 PLB1Q6P1J6 1458 aa11.42□□□□□ -0.58
SRPK1-213ENST00000513367 FOSBP53539 338 aa11.41□□□□□ -0.58
SRPK1-213ENST00000513367 CUL7Q14999 1698 aa11.4□□□□□ -0.58
SRPK1-213ENST00000513367 MAP3K4Q9Y6R4 1608 aa11.4□□□□□ -0.58
SRPK1-213ENST00000513367 PTPREP23469 700 aa11.4□□□□□ -0.58
SRPK1-213ENST00000513367 TEX14Q8IWB6 1497 aa11.39□□□□□ -0.59
SRPK1-213ENST00000513367 PTPRGP23470 1445 aa11.39□□□□□ -0.59
SRPK1-213ENST00000513367 CERKQ8TCT0 537 aa11.39□□□□□ -0.59
SRPK1-213ENST00000513367 ABCC2Q92887 1545 aa11.39□□□□□ -0.59
SRPK1-213ENST00000513367 KIF21BO75037 1637 aa11.38□□□□□ -0.59
SRPK1-213ENST00000513367 LCE2BO14633 110 aa11.37□□□□□ -0.59
SRPK1-213ENST00000513367 ITGBL1O95965 494 aaPredicted RBP11.37□□□□□ -0.59
SRPK1-213ENST00000513367 EPRSP07814 1512 aaKnown RBP11.36□□□□□ -0.59
SRPK1-213ENST00000513367 SPATA31D1Q6ZQQ2 1576 aa11.36□□□□□ -0.59
SRPK1-213ENST00000513367 PKD2Q13563 968 aa11.35□□□□□ -0.59
SRPK1-213ENST00000513367 ADAM33Q9BZ11 813 aa11.35□□□□□ -0.59
SRPK1-213ENST00000513367 PTPRMP28827 1452 aa11.35□□□□□ -0.59
SRPK1-213ENST00000513367 PCF11O94913 1555 aaKnown RBP11.34□□□□□ -0.59
SRPK1-213ENST00000513367 NBPF3Q9H094 633 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms