RNA–Protein interactions for RNA: ENST00000513009.5

SDHC-208, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-208ENST00000513009 ITSN2Q9NZM3 1697 aa13.59□□□□□ -0.23
SDHC-208ENST00000513009 ABCC1P33527 1531 aa13.59□□□□□ -0.23
SDHC-208ENST00000513009 EVX2Q03828 476 aa13.58□□□□□ -0.24
SDHC-208ENST00000513009 TRAPPC8Q9Y2L5 1435 aa13.56□□□□□ -0.24
SDHC-208ENST00000513009 KIDINS220Q9ULH0 1771 aa13.56□□□□□ -0.24
SDHC-208ENST00000513009 MYT1LQ9UL68 1186 aa13.56□□□□□ -0.24
SDHC-208ENST00000513009 DISP3Q9P2K9 1392 aa13.56□□□□□ -0.24
SDHC-208ENST00000513009 CNTLNQ9NXG0 1405 aa13.56□□□□□ -0.24
SDHC-208ENST00000513009 IQSEC2Q5JU85 1478 aa13.55□□□□□ -0.24
SDHC-208ENST00000513009 LTBP4Q8N2S1 1624 aa13.55□□□□□ -0.24
SDHC-208ENST00000513009 CCDC18Q5T9S5 1454 aa13.55□□□□□ -0.24
SDHC-208ENST00000513009 MROH2AA6NES4 1674 aa13.54□□□□□ -0.24
SDHC-208ENST00000513009 CDC42BPAQ5VT25 1732 aa13.54□□□□□ -0.24
SDHC-208ENST00000513009 SP7Q8TDD2 431 aaPredicted RBP13.54□□□□□ -0.24
SDHC-208ENST00000513009 ILDR2Q71H61 639 aa13.53□□□□□ -0.24
SDHC-208ENST00000513009 ESF1Q9H501 851 aaKnown RBP13.53□□□□□ -0.24
SDHC-208ENST00000513009 CREBZFQ9NS37 354 aa13.53□□□□□ -0.24
SDHC-208ENST00000513009 NCOA1Q15788 1441 aa13.53□□□□□ -0.24
SDHC-208ENST00000513009 CASKIN1Q8WXD9 1431 aa13.53□□□□□ -0.24
SDHC-208ENST00000513009 SOCS7O14512 581 aa13.52□□□□□ -0.25
SDHC-208ENST00000513009 SPATA31D1Q6ZQQ2 1576 aa13.51□□□□□ -0.25
SDHC-208ENST00000513009 NPATQ14207 1427 aa13.51□□□□□ -0.25
SDHC-208ENST00000513009 C19orf67A6NJJ6 358 aa13.51□□□□□ -0.25
SDHC-208ENST00000513009 FARP1Q9Y4F1 1045 aaPredicted RBP13.5□□□□□ -0.25
SDHC-208ENST00000513009 SAMD9LQ8IVG5 1584 aa13.49□□□□□ -0.25
SDHC-208ENST00000513009 FKBP8Q14318 412 aa13.48□□□□□ -0.25
SDHC-208ENST00000513009 CAMSAP1Q5T5Y3 1602 aa13.48□□□□□ -0.25
SDHC-208ENST00000513009 ZNF142P52746 1687 aaPredicted RBP13.47□□□□□ -0.25
SDHC-208ENST00000513009 SUPT6HQ7KZ85 1726 aaKnown RBP13.46□□□□□ -0.25
SDHC-208ENST00000513009 FYCO1Q9BQS8 1478 aa13.46□□□□□ -0.25
SDHC-208ENST00000513009 ZMYM3Q14202 1370 aa13.45□□□□□ -0.26
SDHC-208ENST00000513009 PLXNC1O60486 1568 aa13.45□□□□□ -0.26
SDHC-208ENST00000513009 SYCP2Q9BX26 1530 aa13.45□□□□□ -0.26
SDHC-208ENST00000513009 ATP7AQ04656 1500 aa13.44□□□□□ -0.26
SDHC-208ENST00000513009 GPATCH8Q9UKJ3 1502 aaKnown RBP13.44□□□□□ -0.26
SDHC-208ENST00000513009 PLA2R1Q13018 1463 aa13.44□□□□□ -0.26
SDHC-208ENST00000513009 MYO3AQ8NEV4 1616 aa13.44□□□□□ -0.26
SDHC-208ENST00000513009 KIAA1107Q9UPP5 1409 aa13.44□□□□□ -0.26
SDHC-208ENST00000513009 INO80Q9ULG1 1556 aaPredicted RBP13.44□□□□□ -0.26
SDHC-208ENST00000513009 CLTCQ00610 1675 aaKnown RBP13.44□□□□□ -0.26
SDHC-208ENST00000513009 SPAG9O60271 1321 aaKnown RBP13.43□□□□□ -0.26
SDHC-208ENST00000513009 PLEKHH2Q8IVE3 1493 aa13.42□□□□□ -0.26
SDHC-208ENST00000513009 CEP170BQ9Y4F5 1589 aaPredicted RBP13.41□□□□□ -0.26
SDHC-208ENST00000513009 A2MP01023 1474 aa13.41□□□□□ -0.26
SDHC-208ENST00000513009 TCOF1Q13428 1488 aaKnown RBP13.41□□□□□ -0.26
SDHC-208ENST00000513009 PTPRKQ15262 1439 aa13.4□□□□□ -0.26
SDHC-208ENST00000513009 PKD2Q13563 968 aa13.4□□□□□ -0.26
SDHC-208ENST00000513009 ZNF777Q9ULD5 760 aaPredicted RBP13.4□□□□□ -0.26
SDHC-208ENST00000513009 ADGBQ8N7X0 1667 aa13.4□□□□□ -0.26
SDHC-208ENST00000513009 NCKAP5LQ9HCH0 1330 aa13.39□□□□□ -0.27
SDHC-208ENST00000513009 HNRNPMP52272 730 aaKnown RBP eCLIP13.39□□□□□ -0.27
SDHC-208ENST00000513009 ZNF335Q9H4Z2 1342 aaPredicted RBP13.39□□□□□ -0.27
SDHC-208ENST00000513009 MNX1P50219 401 aaPredicted RBP13.38□□□□□ -0.27
SDHC-208ENST00000513009 CFDP1Q9UEE9 299 aaPredicted RBP13.36□□□□□ -0.27
SDHC-208ENST00000513009 CCNB3Q8WWL7 1395 aa13.35□□□□□ -0.27
SDHC-208ENST00000513009 UBAP1LF5GYI3 381 aa13.35□□□□□ -0.27
SDHC-208ENST00000513009 A2ML1A8K2U0 1454 aa13.35□□□□□ -0.27
SDHC-208ENST00000513009 GGT6Q6P531 493 aa13.34□□□□□ -0.27
SDHC-208ENST00000513009 DNMT1P26358 1616 aaKnown RBP13.34□□□□□ -0.27
SDHC-208ENST00000513009 POLR1AO95602 1720 aaPredicted RBP13.33□□□□□ -0.27
SDHC-208ENST00000513009 RTEL1-TNFRSF6BF6WH68 1400 aa13.32□□□□□ -0.28
SDHC-208ENST00000513009 MBD5Q9P267 1494 aa13.32□□□□□ -0.28
SDHC-208ENST00000513009 FAM135AQ9P2D6 1515 aa13.32□□□□□ -0.28
SDHC-208ENST00000513009 TIAM1Q13009 1591 aa13.32□□□□□ -0.28
SDHC-208ENST00000513009 CD44P16070 742 aaKnown RBP13.31□□□□□ -0.28
SDHC-208ENST00000513009 MTUS2Q5JR59 1369 aa13.31□□□□□ -0.28
SDHC-208ENST00000513009 CPS1P31327 1500 aa13.3□□□□□ -0.28
SDHC-208ENST00000513009 NEURL4Q96JN8 1562 aa13.29□□□□□ -0.28
SDHC-208ENST00000513009 DHX29Q7Z478 1369 aaKnown RBP13.29□□□□□ -0.28
SDHC-208ENST00000513009 EHBP1L1Q8N3D4 1523 aa13.29□□□□□ -0.28
SDHC-208ENST00000513009 PZPP20742 1482 aa13.28□□□□□ -0.28
SDHC-208ENST00000513009 ZNF644Q9H582 1327 aaPredicted RBP13.27□□□□□ -0.29
SDHC-208ENST00000513009 CEP162Q5TB80 1403 aa13.27□□□□□ -0.29
SDHC-208ENST00000513009 KDM5DQ9BY66 1539 aa13.27□□□□□ -0.29
SDHC-208ENST00000513009 TNRQ92752 1358 aa13.26□□□□□ -0.29
SDHC-208ENST00000513009 SHANK2Q9UPX8 1470 aa13.26□□□□□ -0.29
SDHC-208ENST00000513009 MED1Q15648 1581 aaPredicted RBP13.25□□□□□ -0.29
SDHC-208ENST00000513009 DEPDC5O75140 1603 aa13.24□□□□□ -0.29
SDHC-208ENST00000513009 CCDC141Q6ZP82 1450 aa13.24□□□□□ -0.29
SDHC-208ENST00000513009 TOM1O60784 492 aa13.24□□□□□ -0.29
SDHC-208ENST00000513009 GABBR2O75899 941 aa13.24□□□□□ -0.29
SDHC-208ENST00000513009 VWDEQ8N2E2 1590 aa13.24□□□□□ -0.29
SDHC-208ENST00000513009 MED14O60244 1454 aa13.23□□□□□ -0.29
SDHC-208ENST00000513009 NLRP1Q9C000 1473 aa13.23□□□□□ -0.29
SDHC-208ENST00000513009 KIF3BO15066 747 aa13.23□□□□□ -0.29
SDHC-208ENST00000513009 HSPA1LP34931 641 aa13.23□□□□□ -0.29
SDHC-208ENST00000513009 FBXO31Q5XUX0 539 aaPredicted RBP13.23□□□□□ -0.29
SDHC-208ENST00000513009 RSPH4AQ5TD94 716 aa13.22□□□□□ -0.29
SDHC-208ENST00000513009 ANKLE2Q86XL3 938 aa13.21□□□□□ -0.29
SDHC-208ENST00000513009 MIER1Q8N108 512 aa13.21□□□□□ -0.29
SDHC-208ENST00000513009 THEMISQ8N1K5 641 aaPredicted RBP13.21□□□□□ -0.29
SDHC-208ENST00000513009 CAMSAP2Q08AD1 1489 aa13.21□□□□□ -0.3
SDHC-208ENST00000513009 MIA2Q96PC5 1412 aa13.21□□□□□ -0.3
SDHC-208ENST00000513009 ALKQ9UM73 1620 aa13.21□□□□□ -0.3
SDHC-208ENST00000513009 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.2□□□□□ -0.3
SDHC-208ENST00000513009 ARHGEF5Q12774 1597 aa13.2□□□□□ -0.3
SDHC-208ENST00000513009 UGGT1Q9NYU2 1555 aa13.2□□□□□ -0.3
SDHC-208ENST00000513009 WASHC2CQ9Y4E1 1318 aa13.2□□□□□ -0.3
SDHC-208ENST00000513009 IQGAP1P46940 1657 aa13.19□□□□□ -0.3
SDHC-208ENST00000513009 PIP4K2BP78356 416 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms