RNA–Protein interactions for RNA: ENST00000512098.5

SSBP2-215, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-215ENST00000512098 THEMISQ8N1K5 641 aaPredicted RBP21.47■■□□□ 1.03
SSBP2-215ENST00000512098 UPF1Q92900 1129 aaKnown RBP eCLIP21.47■■□□□ 1.03
SSBP2-215ENST00000512098 INO80Q9ULG1 1556 aaPredicted RBP21.46■■□□□ 1.03
SSBP2-215ENST00000512098 LRRIQ1Q96JM4 1722 aa21.45■■□□□ 1.02
SSBP2-215ENST00000512098 FAM135BQ49AJ0 1406 aa21.45■■□□□ 1.02
SSBP2-215ENST00000512098 SYCP2Q9BX26 1530 aa21.43■■□□□ 1.02
SSBP2-215ENST00000512098 UGGT1Q9NYU2 1555 aa21.41■■□□□ 1.02
SSBP2-215ENST00000512098 PZPP20742 1482 aa21.41■■□□□ 1.02
SSBP2-215ENST00000512098 NLRP1Q9C000 1473 aa21.41■■□□□ 1.02
SSBP2-215ENST00000512098 ADGBQ8N7X0 1667 aa21.4■■□□□ 1.02
SSBP2-215ENST00000512098 FAM135AQ9P2D6 1515 aa21.4■■□□□ 1.02
SSBP2-215ENST00000512098 FBXO31Q5XUX0 539 aaPredicted RBP21.4■■□□□ 1.02
SSBP2-215ENST00000512098 XIRP1Q702N8 1843 aaKnown RBP21.4■■□□□ 1.02
SSBP2-215ENST00000512098 EEA1Q15075 1411 aa21.38■■□□□ 1.01
SSBP2-215ENST00000512098 KIAA1107Q9UPP5 1409 aa21.37■■□□□ 1.01
SSBP2-215ENST00000512098 ZC3H13Q5T200 1668 aaKnown RBP21.36■■□□□ 1.01
SSBP2-215ENST00000512098 MIA2Q96PC5 1412 aa21.36■■□□□ 1.01
SSBP2-215ENST00000512098 HNRNPMP52272 730 aaKnown RBP eCLIP21.35■■□□□ 1.011e-6■■■■□ 22.8
SSBP2-215ENST00000512098 ZNF777Q9ULD5 760 aaPredicted RBP21.33■■□□□ 1.01
SSBP2-215ENST00000512098 ARHGAP35Q9NRY4 1499 aa21.32■■□□□ 1
SSBP2-215ENST00000512098 PLEKHH2Q8IVE3 1493 aa21.32■■□□□ 1
SSBP2-215ENST00000512098 KDM5DQ9BY66 1539 aa21.3■■□□□ 1
SSBP2-215ENST00000512098 ROBO1Q9Y6N7 1651 aa21.29■■□□□ 1
SSBP2-215ENST00000512098 GPATCH8Q9UKJ3 1502 aaKnown RBP21.29■■□□□ 1
SSBP2-215ENST00000512098 CCDC18Q5T9S5 1454 aa21.28■■□□□ 1
SSBP2-215ENST00000512098 DHX29Q7Z478 1369 aaKnown RBP21.25■□□□□ 0.99
SSBP2-215ENST00000512098 JCADQ9P266 1359 aa21.23■□□□□ 0.99
SSBP2-215ENST00000512098 ZNF772Q68DY9 489 aaPredicted RBP21.22■□□□□ 0.99
SSBP2-215ENST00000512098 RTEL1-TNFRSF6BF6WH68 1400 aa21.21■□□□□ 0.99
SSBP2-215ENST00000512098 WASHC2CQ9Y4E1 1318 aa21.21■□□□□ 0.99
SSBP2-215ENST00000512098 LRRC9Q6ZRR7 1453 aa21.2■□□□□ 0.98
SSBP2-215ENST00000512098 TRIM52Q96A61 297 aa21.2■□□□□ 0.98
SSBP2-215ENST00000512098 SCAF11Q99590 1463 aaKnown RBP21.19■□□□□ 0.98
SSBP2-215ENST00000512098 CDK12Q9NYV4 1490 aaPredicted RBP21.19■□□□□ 0.98
SSBP2-215ENST00000512098 PHLPP1O60346 1717 aa21.18■□□□□ 0.98
SSBP2-215ENST00000512098 KIF3BO15066 747 aa21.17■□□□□ 0.98
SSBP2-215ENST00000512098 CFDP1Q9UEE9 299 aaPredicted RBP21.17■□□□□ 0.98
SSBP2-215ENST00000512098 CASKIN1Q8WXD9 1431 aa21.17■□□□□ 0.98
SSBP2-215ENST00000512098 UBR1Q8IWV7 1749 aa21.15■□□□□ 0.98
SSBP2-215ENST00000512098 TMEM94Q12767 1356 aa21.15■□□□□ 0.98
SSBP2-215ENST00000512098 MAP3K1Q13233 1512 aa21.14■□□□□ 0.97
SSBP2-215ENST00000512098 ARHGAP23Q9P227 1491 aa21.13■□□□□ 0.97
SSBP2-215ENST00000512098 MBD5Q9P267 1494 aa21.13■□□□□ 0.97
SSBP2-215ENST00000512098 LRP6O75581 1613 aa21.12■□□□□ 0.97
SSBP2-215ENST00000512098 SPATA31A6Q5VVP1 1343 aa21.12■□□□□ 0.97
SSBP2-215ENST00000512098 RXRBP28702 533 aa21.12■□□□□ 0.97
SSBP2-215ENST00000512098 SLIT1O75093 1534 aa21.12■□□□□ 0.97
SSBP2-215ENST00000512098 LTKP29376 864 aa21.11■□□□□ 0.97
SSBP2-215ENST00000512098 COL16A1Q07092 1604 aaPredicted RBP21.1■□□□□ 0.97
SSBP2-215ENST00000512098 FGD6Q6ZV73 1430 aa21.1■□□□□ 0.97
SSBP2-215ENST00000512098 NCOA2Q15596 1464 aa21.08■□□□□ 0.97
SSBP2-215ENST00000512098 ERVK-7P63135 1459 aa21.07■□□□□ 0.96
SSBP2-215ENST00000512098 UBTFP17480 764 aaKnown RBP21.07■□□□□ 0.96
SSBP2-215ENST00000512098 TXNDC2Q86VQ3 553 aa21.07■□□□□ 0.96
SSBP2-215ENST00000512098 CCNB3Q8WWL7 1395 aa21.07■□□□□ 0.96
SSBP2-215ENST00000512098 KCNA6P17658 529 aa21.05■□□□□ 0.96
SSBP2-215ENST00000512098 MEX3CQ5U5Q3 659 aaKnown RBP21.05■□□□□ 0.96
SSBP2-215ENST00000512098 SLAIN2Q9P270 581 aa21.04■□□□□ 0.96
SSBP2-215ENST00000512098 PRDM15P57071 1507 aaPredicted RBP21.04■□□□□ 0.96
SSBP2-215ENST00000512098 SHPRHQ149N8 1683 aa21.02■□□□□ 0.96
SSBP2-215ENST00000512098 ABCC3O15438 1527 aa21.02■□□□□ 0.96
SSBP2-215ENST00000512098 CFAP65Q6ZU64 1925 aaKnown RBP21.02■□□□□ 0.95
SSBP2-215ENST00000512098 ZNF644Q9H582 1327 aaPredicted RBP21.02■□□□□ 0.95
SSBP2-215ENST00000512098 TIAM1Q13009 1591 aa21.02■□□□□ 0.95
SSBP2-215ENST00000512098 FYCO1Q9BQS8 1478 aa21.01■□□□□ 0.95
SSBP2-215ENST00000512098 PROSER2Q86WR7 435 aaPredicted RBP21.01■□□□□ 0.95
SSBP2-215ENST00000512098 EID1Q9Y6B2 187 aa21.01■□□□□ 0.95
SSBP2-215ENST00000512098 MSH6P52701 1360 aa21■□□□□ 0.95
SSBP2-215ENST00000512098 FOXD1Q16676 465 aa21■□□□□ 0.95
SSBP2-215ENST00000512098 NKTRP30414 1462 aaKnown RBP21■□□□□ 0.95
SSBP2-215ENST00000512098 CAMSAP2Q08AD1 1489 aa20.97■□□□□ 0.95
SSBP2-215ENST00000512098 ZRANB1Q9UGI0 708 aa20.97■□□□□ 0.95
SSBP2-215ENST00000512098 NWD1Q149M9 1564 aa20.97■□□□□ 0.95
SSBP2-215ENST00000512098 CCDC141Q6ZP82 1450 aa20.95■□□□□ 0.94
SSBP2-215ENST00000512098 RBM33Q96EV2 1170 aaKnown RBP20.95■□□□□ 0.94
SSBP2-215ENST00000512098 RGS12O14924 1447 aa20.95■□□□□ 0.94
SSBP2-215ENST00000512098 TET3O43151 1660 aa20.94■□□□□ 0.94
SSBP2-215ENST00000512098 SETBP1Q9Y6X0 1596 aa20.93■□□□□ 0.94
SSBP2-215ENST00000512098 AHDC1Q5TGY3 1603 aaPredicted RBP20.93■□□□□ 0.94
SSBP2-215ENST00000512098 TMEM2Q9UHN6 1383 aa20.93■□□□□ 0.94
SSBP2-215ENST00000512098 RSPH4AQ5TD94 716 aa20.92■□□□□ 0.94
SSBP2-215ENST00000512098 EP400Q96L91 3159 aa20.92■□□□□ 0.94
SSBP2-215ENST00000512098 KDM5AP29375 1690 aaKnown RBP20.91■□□□□ 0.94
SSBP2-215ENST00000512098 AFF2P51816 1311 aa20.89■□□□□ 0.93
SSBP2-215ENST00000512098 RBM6P78332 1123 aaKnown RBP20.89■□□□□ 0.93
SSBP2-215ENST00000512098 EHMT2Q96KQ7 1210 aa20.88■□□□□ 0.93
SSBP2-215ENST00000512098 CEP152O94986 1710 aa20.87■□□□□ 0.93
SSBP2-215ENST00000512098 CHIC1Q5VXU3 224 aa20.87■□□□□ 0.93
SSBP2-215ENST00000512098 ATAD2Q6PL18 1390 aa20.86■□□□□ 0.93
SSBP2-215ENST00000512098 PIK3C2BO00750 1634 aa20.86■□□□□ 0.93
SSBP2-215ENST00000512098 MROH1Q8NDA8 1641 aa20.86■□□□□ 0.93
SSBP2-215ENST00000512098 EIF2AK4Q9P2K8 1649 aaKnown RBP20.86■□□□□ 0.93
SSBP2-215ENST00000512098 DIP2AQ14689 1571 aa20.86■□□□□ 0.93
SSBP2-215ENST00000512098 MTUS2Q5JR59 1369 aa20.85■□□□□ 0.93
SSBP2-215ENST00000512098 NUTM2BA6NNL0 878 aaPredicted RBP20.85■□□□□ 0.93
SSBP2-215ENST00000512098 NUTM2EB1AL46 878 aaPredicted RBP20.85■□□□□ 0.93
SSBP2-215ENST00000512098 NUTM2DQ5VT03 806 aaPredicted RBP20.85■□□□□ 0.93
SSBP2-215ENST00000512098 NUTM2AQ8IVF1 878 aaPredicted RBP20.85■□□□□ 0.93
SSBP2-215ENST00000512098 SLC26A8Q96RN1 970 aa20.85■□□□□ 0.93
SSBP2-215ENST00000512098 ARHGAP31Q2M1Z3 1444 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms