RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 RGS3P49796 1198 aa13.86□□□□□ -0.19
CPNE4-209ENST00000512055 CCDC7Q96M83 1385 aa13.86□□□□□ -0.19
CPNE4-209ENST00000512055 WASHC2CQ9Y4E1 1318 aa13.86□□□□□ -0.19
CPNE4-209ENST00000512055 MAPK8IP3Q9UPT6 1336 aa13.86□□□□□ -0.19
CPNE4-209ENST00000512055 WDR97A6NE52 1622 aa13.86□□□□□ -0.19
CPNE4-209ENST00000512055 EPRSP07814 1512 aaKnown RBP13.85□□□□□ -0.19
CPNE4-209ENST00000512055 NUDCQ9Y266 331 aa13.85□□□□□ -0.19
CPNE4-209ENST00000512055 NBPF8Q3BBV2 869 aa13.85□□□□□ -0.19
CPNE4-209ENST00000512055 RCAN3Q9UKA8 241 aa13.85□□□□□ -0.19
CPNE4-209ENST00000512055 NAIPQ13075 1403 aa13.85□□□□□ -0.19
CPNE4-209ENST00000512055 MIA2Q96PC5 1412 aa13.84□□□□□ -0.19
CPNE4-209ENST00000512055 L1TD1Q5T7N2 865 aaKnown RBP13.84□□□□□ -0.19
CPNE4-209ENST00000512055 TRAK1Q9UPV9 953 aa13.83□□□□□ -0.19
CPNE4-209ENST00000512055 CUL7Q14999 1698 aa13.83□□□□□ -0.2
CPNE4-209ENST00000512055 HECW1Q76N89 1606 aa13.83□□□□□ -0.2
CPNE4-209ENST00000512055 TROQ12816 1431 aaPredicted RBP13.83□□□□□ -0.2
CPNE4-209ENST00000512055 FTSJ3Q8IY81 847 aaKnown RBP13.82□□□□□ -0.2
CPNE4-209ENST00000512055 AFAP1Q8N556 730 aa13.82□□□□□ -0.2
CPNE4-209ENST00000512055 IQGAP2Q13576 1575 aa13.82□□□□□ -0.2
CPNE4-209ENST00000512055 KIAA0586Q9BVV6 1533 aa13.82□□□□□ -0.2
CPNE4-209ENST00000512055 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.82□□□□□ -0.2
CPNE4-209ENST00000512055 SUPT6HQ7KZ85 1726 aaKnown RBP13.82□□□□□ -0.2
CPNE4-209ENST00000512055 MYBBP1AQ9BQG0 1328 aaKnown RBP13.81□□□□□ -0.2
CPNE4-209ENST00000512055 CCDC146Q8IYE0 955 aa13.81□□□□□ -0.2
CPNE4-209ENST00000512055 ZNF608Q9ULD9 1512 aaPredicted RBP13.8□□□□□ -0.2
CPNE4-209ENST00000512055 MAP3K1Q13233 1512 aa13.8□□□□□ -0.2
CPNE4-209ENST00000512055 DAPK1P53355 1430 aa13.8□□□□□ -0.2
CPNE4-209ENST00000512055 SYNJ2O15056 1496 aa13.8□□□□□ -0.2
CPNE4-209ENST00000512055 SOX12O15370 315 aa13.79□□□□□ -0.2
CPNE4-209ENST00000512055 EIF3AQ14152 1382 aaKnown RBP13.79□□□□□ -0.2
CPNE4-209ENST00000512055 CYB5RLQ6IPT4 315 aa13.78□□□□□ -0.2
CPNE4-209ENST00000512055 OSCARQ8IYS5 282 aa13.78□□□□□ -0.2
CPNE4-209ENST00000512055 CNTLNQ9NXG0 1405 aa13.78□□□□□ -0.2
CPNE4-209ENST00000512055 NCBP3Q53F19 620 aaKnown RBP13.78□□□□□ -0.2
CPNE4-209ENST00000512055 MYH16Q9H6N6 1097 aa13.77□□□□□ -0.2
CPNE4-209ENST00000512055 U2AF1L5P0DN76 240 aaPredicted RBP13.77□□□□□ -0.2
CPNE4-209ENST00000512055 U2AF1Q01081 240 aaKnown RBP eCLIP13.77□□□□□ -0.2
CPNE4-209ENST00000512055 PLB1Q6P1J6 1458 aa13.77□□□□□ -0.2
CPNE4-209ENST00000512055 ZBED9Q6R2W3 1325 aa13.77□□□□□ -0.21
CPNE4-209ENST00000512055 ARHGAP5Q13017 1502 aa13.77□□□□□ -0.21
CPNE4-209ENST00000512055 C9orf84Q5VXU9 1444 aa13.77□□□□□ -0.21
CPNE4-209ENST00000512055 NOC3LQ8WTT2 800 aaKnown RBP13.77□□□□□ -0.21
CPNE4-209ENST00000512055 PKNOX2Q96KN3 472 aa13.76□□□□□ -0.21
CPNE4-209ENST00000512055 NBPF1Q3BBV0 1214 aa13.75□□□□□ -0.21
CPNE4-209ENST00000512055 DRC7Q8IY82 874 aa13.75□□□□□ -0.21
CPNE4-209ENST00000512055 SETQ01105 290 aaPredicted RBP13.74□□□□□ -0.21
CPNE4-209ENST00000512055 GOLGA6L1Q8N7Z2 621 aa13.74□□□□□ -0.21
CPNE4-209ENST00000512055 KIAA1107Q9UPP5 1409 aa13.74□□□□□ -0.21
CPNE4-209ENST00000512055 PTPN23Q9H3S7 1636 aa13.73□□□□□ -0.21
CPNE4-209ENST00000512055 TRHP20396 242 aaPredicted RBP13.73□□□□□ -0.21
CPNE4-209ENST00000512055 GRIN2AQ12879 1464 aa13.73□□□□□ -0.21
CPNE4-209ENST00000512055 CCDC184Q52MB2 194 aa13.73□□□□□ -0.21
CPNE4-209ENST00000512055 GOLGA2Q08379 1002 aa13.72□□□□□ -0.21
CPNE4-209ENST00000512055 HDGFL2Q7Z4V5 671 aaPredicted RBP13.72□□□□□ -0.21
CPNE4-209ENST00000512055 PLIN1O60240 522 aa13.71□□□□□ -0.21
CPNE4-209ENST00000512055 ABCC5O15440 1437 aa13.71□□□□□ -0.22
CPNE4-209ENST00000512055 KIAA2012Q0VF49 1180 aa13.7□□□□□ -0.22
CPNE4-209ENST00000512055 LMOD2Q6P5Q4 547 aa13.7□□□□□ -0.22
CPNE4-209ENST00000512055 ARHGEF11O15085 1522 aa13.7□□□□□ -0.22
CPNE4-209ENST00000512055 PTPRKQ15262 1439 aa13.7□□□□□ -0.22
CPNE4-209ENST00000512055 RRP7AQ9Y3A4 280 aaKnown RBP13.7□□□□□ -0.22
CPNE4-209ENST00000512055 PDE3BQ13370 1112 aa13.69□□□□□ -0.22
CPNE4-209ENST00000512055 TAOK2Q9UL54 1235 aa13.69□□□□□ -0.22
CPNE4-209ENST00000512055 HDGFP51858 240 aaKnown RBP13.69□□□□□ -0.22
CPNE4-209ENST00000512055 RSPH6AQ9H0K4 717 aa13.69□□□□□ -0.22
CPNE4-209ENST00000512055 C11orf95C9JLR9 678 aaPredicted RBP13.68□□□□□ -0.22
CPNE4-209ENST00000512055 PRKCSHP14314 528 aaPredicted RBP13.68□□□□□ -0.22
CPNE4-209ENST00000512055 ROCK1Q13464 1354 aa13.68□□□□□ -0.22
CPNE4-209ENST00000512055 HSP90AB1P08238 724 aaKnown RBP13.67□□□□□ -0.22
CPNE4-209ENST00000512055 ANKRD30BQ9BXX2 1392 aa13.66□□□□□ -0.22
CPNE4-209ENST00000512055 EXOC6Q8TAG9 804 aa13.66□□□□□ -0.22
CPNE4-209ENST00000512055 CAMSAP2Q08AD1 1489 aa13.66□□□□□ -0.22
CPNE4-209ENST00000512055 PATL2C9JE40 543 aaKnown RBP13.66□□□□□ -0.22
CPNE4-209ENST00000512055 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.66□□□□□ -0.22
CPNE4-209ENST00000512055 VGFO15240 615 aaPredicted RBP13.66□□□□□ -0.22
CPNE4-209ENST00000512055 NUTM2FA1L443 756 aa13.65□□□□□ -0.22
CPNE4-209ENST00000512055 THOC2Q8NI27 1593 aaKnown RBP13.65□□□□□ -0.22
CPNE4-209ENST00000512055 CFAP70Q5T0N1 1121 aa13.65□□□□□ -0.22
CPNE4-209ENST00000512055 ZNF771Q7L3S4 317 aaPredicted RBP13.65□□□□□ -0.22
CPNE4-209ENST00000512055 TERF2IPQ9NYB0 399 aa13.65□□□□□ -0.22
CPNE4-209ENST00000512055 CLUAP1Q96AJ1 413 aa13.65□□□□□ -0.22
CPNE4-209ENST00000512055 MAGI1Q96QZ7 1491 aaPredicted RBP13.65□□□□□ -0.22
CPNE4-209ENST00000512055 TMEM132EQ6IEE7 984 aa13.65□□□□□ -0.22
CPNE4-209ENST00000512055 APAF1O14727 1248 aa13.65□□□□□ -0.23
CPNE4-209ENST00000512055 GZF1Q9H116 711 aaPredicted RBP13.64□□□□□ -0.23
CPNE4-209ENST00000512055 MAPKBP1O60336 1514 aa13.64□□□□□ -0.23
CPNE4-209ENST00000512055 MINK1Q8N4C8 1332 aaPredicted RBP13.64□□□□□ -0.23
CPNE4-209ENST00000512055 RRP1P56182 461 aaKnown RBP13.64□□□□□ -0.23
CPNE4-209ENST00000512055 GOLGA6L4A6NEF3 574 aa13.63□□□□□ -0.23
CPNE4-209ENST00000512055 TAF7LQ5H9L4 462 aa13.63□□□□□ -0.23
CPNE4-209ENST00000512055 MS4A1P11836 297 aa13.62□□□□□ -0.23
CPNE4-209ENST00000512055 SCAPERQ9BY12 1400 aa13.62□□□□□ -0.23
CPNE4-209ENST00000512055 NCOA1Q15788 1441 aa13.62□□□□□ -0.23
CPNE4-209ENST00000512055 SPRYD3Q8NCJ5 442 aa13.61□□□□□ -0.23
CPNE4-209ENST00000512055 AKNAQ7Z591 1439 aa13.61□□□□□ -0.23
CPNE4-209ENST00000512055 TCERG1O14776 1098 aaKnown RBP13.61□□□□□ -0.23
CPNE4-209ENST00000512055 FAM69CQ0P6D2 419 aa13.61□□□□□ -0.23
CPNE4-209ENST00000512055 BCL2L13Q9BXK5 485 aa13.61□□□□□ -0.23
CPNE4-209ENST00000512055 EVC2Q86UK5 1308 aa13.6□□□□□ -0.23
CPNE4-209ENST00000512055 CENPJQ9HC77 1338 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms