RNA–Protein interactions for RNA: ENST00000511615.5

SUB1-209, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-209ENST00000511615 DUOX2Q9NRD8 1548 aa13.22□□□□□ -0.29
SUB1-209ENST00000511615 RAPGEF3O95398 923 aa13.22□□□□□ -0.29
SUB1-209ENST00000511615 SLC4A1APQ9BWU0 796 aaKnown RBP13.22□□□□□ -0.29
SUB1-209ENST00000511615 DHX29Q7Z478 1369 aaKnown RBP13.22□□□□□ -0.29
SUB1-209ENST00000511615 ANKRD30BQ9BXX2 1392 aa13.22□□□□□ -0.29
SUB1-209ENST00000511615 ERBINQ96RT1 1412 aa13.22□□□□□ -0.29
SUB1-209ENST00000511615 ZFYVE16Q7Z3T8 1539 aa13.22□□□□□ -0.29
SUB1-209ENST00000511615 PPRC1Q5VV67 1664 aaKnown RBP13.22□□□□□ -0.29
SUB1-209ENST00000511615 KIF13AQ9H1H9 1805 aa13.22□□□□□ -0.29
SUB1-209ENST00000511615 EIF4G2P78344 907 aaKnown RBP eCLIP13.21□□□□□ -0.29
SUB1-209ENST00000511615 HIRIP3Q9BW71 556 aaPredicted RBP13.21□□□□□ -0.3
SUB1-209ENST00000511615 INO80Q9ULG1 1556 aaPredicted RBP13.21□□□□□ -0.3
SUB1-209ENST00000511615 ATP7AQ04656 1500 aa13.2□□□□□ -0.3
SUB1-209ENST00000511615 MAGI2Q86UL8 1455 aa13.2□□□□□ -0.3
SUB1-209ENST00000511615 RPRD2Q5VT52 1461 aaKnown RBP13.19□□□□□ -0.3
SUB1-209ENST00000511615 L3MBTL2Q969R5 705 aa13.19□□□□□ -0.3
SUB1-209ENST00000511615 HSPA5P11021 654 aaKnown RBP13.18□□□□□ -0.3
SUB1-209ENST00000511615 COL17A1Q9UMD9 1497 aaPredicted RBP13.17□□□□□ -0.3
SUB1-209ENST00000511615 KDM5DQ9BY66 1539 aa13.17□□□□□ -0.3
SUB1-209ENST00000511615 KIDINS220Q9ULH0 1771 aa13.17□□□□□ -0.3
SUB1-209ENST00000511615 NUP155O75694 1391 aa13.16□□□□□ -0.3
SUB1-209ENST00000511615 ZMYM4Q5VZL5 1548 aa13.16□□□□□ -0.3
SUB1-209ENST00000511615 RICTORQ6R327 1708 aa13.15□□□□□ -0.3
SUB1-209ENST00000511615 PZPP20742 1482 aa13.15□□□□□ -0.3
SUB1-209ENST00000511615 A2MP01023 1474 aa13.14□□□□□ -0.31
SUB1-209ENST00000511615 FRMPD1Q5SYB0 1578 aa13.13□□□□□ -0.31
SUB1-209ENST00000511615 HECW2Q9P2P5 1572 aa13.13□□□□□ -0.31
SUB1-209ENST00000511615 TRHP20396 242 aaPredicted RBP13.13□□□□□ -0.31
SUB1-209ENST00000511615 MYT1LQ9UL68 1186 aa13.12□□□□□ -0.31
SUB1-209ENST00000511615 KIF3BO15066 747 aa13.11□□□□□ -0.31
SUB1-209ENST00000511615 UNC13BO14795 1591 aa13.11□□□□□ -0.31
SUB1-209ENST00000511615 TSPOAP1O95153 1857 aa13.11□□□□□ -0.31
SUB1-209ENST00000511615 ATP10AO60312 1499 aa13.1□□□□□ -0.31
SUB1-209ENST00000511615 PKD2Q13563 968 aa13.1□□□□□ -0.31
SUB1-209ENST00000511615 SUPT16HQ9Y5B9 1047 aaKnown RBP13.1□□□□□ -0.31
SUB1-209ENST00000511615 YEATS2Q9ULM3 1422 aa13.1□□□□□ -0.31
SUB1-209ENST00000511615 WASHC2AQ641Q2 1341 aa13.1□□□□□ -0.31
SUB1-209ENST00000511615 EIF2AK4Q9P2K8 1649 aaKnown RBP13.09□□□□□ -0.31
SUB1-209ENST00000511615 REREQ9P2R6 1566 aa13.08□□□□□ -0.32
SUB1-209ENST00000511615 FAM135AQ9P2D6 1515 aa13.08□□□□□ -0.32
SUB1-209ENST00000511615 CNTLNQ9NXG0 1405 aa13.08□□□□□ -0.32
SUB1-209ENST00000511615 VWDEQ8N2E2 1590 aa13.08□□□□□ -0.32
SUB1-209ENST00000511615 DIP2CQ9Y2E4 1556 aa13.08□□□□□ -0.32
SUB1-209ENST00000511615 BCORL1Q5H9F3 1711 aa13.08□□□□□ -0.32
SUB1-209ENST00000511615 DEPDC5O75140 1603 aa13.07□□□□□ -0.32
SUB1-209ENST00000511615 CCDC7Q96M83 1385 aa13.07□□□□□ -0.32
SUB1-209ENST00000511615 NBPF8Q3BBV2 869 aa13.07□□□□□ -0.32
SUB1-209ENST00000511615 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.06□□□□□ -0.32
SUB1-209ENST00000511615 ABCA6Q8N139 1617 aa13.06□□□□□ -0.32
SUB1-209ENST00000511615 AGLP35573 1532 aa13.06□□□□□ -0.32
SUB1-209ENST00000511615 KANK1Q14678 1352 aa13.06□□□□□ -0.32
SUB1-209ENST00000511615 IQGAP3Q86VI3 1631 aa13.06□□□□□ -0.32
SUB1-209ENST00000511615 NEFLP07196 543 aa13.05□□□□□ -0.32
SUB1-209ENST00000511615 PRDM15P57071 1507 aaPredicted RBP13.04□□□□□ -0.32
SUB1-209ENST00000511615 LMTK2Q8IWU2 1503 aa13.04□□□□□ -0.32
SUB1-209ENST00000511615 MROH1Q8NDA8 1641 aa13.03□□□□□ -0.32
SUB1-209ENST00000511615 RNF17Q9BXT8 1623 aaKnown RBP13.03□□□□□ -0.32
SUB1-209ENST00000511615 ARID4BQ4LE39 1312 aaPredicted RBP13.02□□□□□ -0.32
SUB1-209ENST00000511615 SPATA31E1Q6ZUB1 1445 aa13.02□□□□□ -0.32
SUB1-209ENST00000511615 PTPRTO14522 1441 aa13.02□□□□□ -0.33
SUB1-209ENST00000511615 PLA2R1Q13018 1463 aa13.01□□□□□ -0.33
SUB1-209ENST00000511615 UHRF1BP1Q6BDS2 1440 aa13.01□□□□□ -0.33
SUB1-209ENST00000511615 GGT6Q6P531 493 aa13□□□□□ -0.33
SUB1-209ENST00000511615 ARHGAP31Q2M1Z3 1444 aa12.99□□□□□ -0.33
SUB1-209ENST00000511615 KIF7Q2M1P5 1343 aa12.99□□□□□ -0.33
SUB1-209ENST00000511615 WASHC2CQ9Y4E1 1318 aa12.99□□□□□ -0.33
SUB1-209ENST00000511615 ARHGEF40Q8TER5 1519 aa12.98□□□□□ -0.33
SUB1-209ENST00000511615 C11orf95C9JLR9 678 aaPredicted RBP12.98□□□□□ -0.33
SUB1-209ENST00000511615 USP47Q96K76 1375 aa12.97□□□□□ -0.33
SUB1-209ENST00000511615 PRKRIP1Q9H875 184 aaPredicted RBP12.97□□□□□ -0.33
SUB1-209ENST00000511615 ROCK2O75116 1388 aaKnown RBP12.97□□□□□ -0.33
SUB1-209ENST00000511615 ZNF326Q5BKZ1 582 aaKnown RBP12.96□□□□□ -0.33
SUB1-209ENST00000511615 RALGAPBQ86X10 1494 aa12.96□□□□□ -0.33
SUB1-209ENST00000511615 TET3O43151 1660 aa12.96□□□□□ -0.33
SUB1-209ENST00000511615 HNRNPUQ00839 825 aaKnown RBP eCLIP12.96□□□□□ -0.34
SUB1-209ENST00000511615 FKBP8Q14318 412 aa12.96□□□□□ -0.34
SUB1-209ENST00000511615 ABCC3O15438 1527 aa12.95□□□□□ -0.34
SUB1-209ENST00000511615 EFCAB6Q5THR3 1501 aa12.94□□□□□ -0.34
SUB1-209ENST00000511615 NPATQ14207 1427 aa12.93□□□□□ -0.34
SUB1-209ENST00000511615 STAC3Q96MF2 364 aa12.93□□□□□ -0.34
SUB1-209ENST00000511615 CARD11Q9BXL7 1154 aa12.93□□□□□ -0.34
SUB1-209ENST00000511615 POLR1AO95602 1720 aaPredicted RBP12.93□□□□□ -0.34
SUB1-209ENST00000511615 CCDC144AA2RUR9 1427 aa12.93□□□□□ -0.34
SUB1-209ENST00000511615 NOS1P29475 1434 aa12.92□□□□□ -0.34
SUB1-209ENST00000511615 MRS2Q9HD23 443 aa12.92□□□□□ -0.34
SUB1-209ENST00000511615 E9PCH4 1651 aa12.92□□□□□ -0.34
SUB1-209ENST00000511615 DCAF11Q8TEB1 546 aa12.91□□□□□ -0.34
SUB1-209ENST00000511615 TRPM2O94759 1503 aa12.91□□□□□ -0.34
SUB1-209ENST00000511615 SLC52A1Q9NWF4 448 aa12.89□□□□□ -0.35
SUB1-209ENST00000511615 KDM2AQ9Y2K7 1162 aa12.89□□□□□ -0.35
SUB1-209ENST00000511615 ZC3H13Q5T200 1668 aaKnown RBP12.89□□□□□ -0.35
SUB1-209ENST00000511615 NEURL4Q96JN8 1562 aa12.89□□□□□ -0.35
SUB1-209ENST00000511615 SIGLEC1Q9BZZ2 1709 aa12.88□□□□□ -0.35
SUB1-209ENST00000511615 ERICH6BQ5W0A0 696 aa12.87□□□□□ -0.35
SUB1-209ENST00000511615 ZMYM3Q14202 1370 aa12.87□□□□□ -0.35
SUB1-209ENST00000511615 POLR3GLQ9BT43 218 aa12.86□□□□□ -0.35
SUB1-209ENST00000511615 FAM9BQ8IZU0 186 aa12.86□□□□□ -0.35
SUB1-209ENST00000511615 KTN1Q86UP2 1357 aaKnown RBP12.85□□□□□ -0.35
SUB1-209ENST00000511615 BCANQ96GW7 911 aa12.85□□□□□ -0.35
SUB1-209ENST00000511615 ZBED9Q6R2W3 1325 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms