RNA–Protein interactions for RNA: ENST00000511238.5

TBC1D1-217, Transcript of TBC1 domain family member 1, humanhuman

TSL 3

Gene TBC1D1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-217ENST00000511238 PTGDRQ13258 359 aa8.97□□□□□ -0.97
TBC1D1-217ENST00000511238 TYW1BQ6NUM6 668 aa8.97□□□□□ -0.97
TBC1D1-217ENST00000511238 ZNF710Q8N1W2 664 aa8.97□□□□□ -0.97
TBC1D1-217ENST00000511238 JPH4Q96JJ6 628 aa8.97□□□□□ -0.97
TBC1D1-217ENST00000511238 SMARCA4P51532 1647 aa8.97□□□□□ -0.97
TBC1D1-217ENST00000511238 GNPATO15228 680 aa8.96□□□□□ -0.98
TBC1D1-217ENST00000511238 HIC1Q14526 733 aa8.96□□□□□ -0.98
TBC1D1-217ENST00000511238 MAP3K7O43318 606 aa8.95□□□□□ -0.98
TBC1D1-217ENST00000511238 FOSBP53539 338 aa8.95□□□□□ -0.98
TBC1D1-217ENST00000511238 FBXW7Q969H0 707 aa8.95□□□□□ -0.98
TBC1D1-217ENST00000511238 RBM33Q96EV2 1170 aaKnown RBP8.95□□□□□ -0.98
TBC1D1-217ENST00000511238 OTUD5Q96G74 571 aa8.95□□□□□ -0.98
TBC1D1-217ENST00000511238 CDHR5Q9HBB8 845 aa8.95□□□□□ -0.98
TBC1D1-217ENST00000511238 NCAPD3P42695 1498 aa8.95□□□□□ -0.98
TBC1D1-217ENST00000511238 ATAD2BQ9ULI0 1458 aa8.95□□□□□ -0.98
TBC1D1-217ENST00000511238 FECHP22830 423 aa8.94□□□□□ -0.98
TBC1D1-217ENST00000511238 MAP2K5Q13163 448 aa8.94□□□□□ -0.98
TBC1D1-217ENST00000511238 NEUROD2Q15784 382 aa8.94□□□□□ -0.98
TBC1D1-217ENST00000511238 MINK1Q8N4C8 1332 aaPredicted RBP8.94□□□□□ -0.98
TBC1D1-217ENST00000511238 SNPHO15079 494 aa8.93□□□□□ -0.98
TBC1D1-217ENST00000511238 TSR1Q2NL82 804 aaKnown RBP8.93□□□□□ -0.98
TBC1D1-217ENST00000511238 ZNF454Q8N9F8 522 aa8.93□□□□□ -0.98
TBC1D1-217ENST00000511238 NPDC1Q9NQX5 325 aaPredicted RBP8.93□□□□□ -0.98
TBC1D1-217ENST00000511238 SMARCA2P51531 1590 aa8.93□□□□□ -0.98
TBC1D1-217ENST00000511238 MROH2BQ7Z745 1585 aa8.92□□□□□ -0.98
TBC1D1-217ENST00000511238 TRIM66O15016 1216 aa8.92□□□□□ -0.98
TBC1D1-217ENST00000511238 ZDHHC16Q969W1 377 aa8.92□□□□□ -0.98
TBC1D1-217ENST00000511238 IRF6O14896 467 aa8.91□□□□□ -0.98
TBC1D1-217ENST00000511238 LHX6Q9UPM6 363 aa8.91□□□□□ -0.98
TBC1D1-217ENST00000511238 TMEM132AQ24JP5 1023 aa8.9□□□□□ -0.98
TBC1D1-217ENST00000511238 LHX8Q68G74 356 aa8.9□□□□□ -0.98
TBC1D1-217ENST00000511238 CCDC102AQ96A19 550 aa8.9□□□□□ -0.98
TBC1D1-217ENST00000511238 PEG3Q9GZU2 1588 aa8.9□□□□□ -0.99
TBC1D1-217ENST00000511238 HOXB1P14653 301 aaPredicted RBP8.89□□□□□ -0.99
TBC1D1-217ENST00000511238 C6orf132Q5T0Z8 1188 aa8.89□□□□□ -0.99
TBC1D1-217ENST00000511238 HMGXB3Q12766 1538 aa8.89□□□□□ -0.99
TBC1D1-217ENST00000511238 PDE4DQ08499 809 aa8.88□□□□□ -0.99
TBC1D1-217ENST00000511238 ADAM33Q9BZ11 813 aa8.88□□□□□ -0.99
TBC1D1-217ENST00000511238 BAZ1BQ9UIG0 1483 aaKnown RBP8.87□□□□□ -0.99
TBC1D1-217ENST00000511238 GPBP1L1Q9HC44 474 aaPredicted RBP8.86□□□□□ -0.99
TBC1D1-217ENST00000511238 PSDA5PKW4 1024 aaPredicted RBP8.85□□□□□ -0.99
TBC1D1-217ENST00000511238 PPP4R3BQ5MIZ7 849 aa8.85□□□□□ -0.99
TBC1D1-217ENST00000511238 CERKQ8TCT0 537 aa8.85□□□□□ -0.99
TBC1D1-217ENST00000511238 AMHR2Q16671 573 aa8.84□□□□□ -0.99
TBC1D1-217ENST00000511238 RSF1Q96T23 1441 aaPredicted RBP8.83□□□□□ -1
TBC1D1-217ENST00000511238 KDM4CQ9H3R0 1056 aa8.83□□□□□ -1
TBC1D1-217ENST00000511238 BCL2L12Q9HB09 334 aa8.82□□□□□ -1
TBC1D1-217ENST00000511238 PADI6Q6TGC4 694 aa8.81□□□□□ -1
TBC1D1-217ENST00000511238 TTC13Q8NBP0 860 aa8.8□□□□□ -1
TBC1D1-217ENST00000511238 RBM27Q9P2N5 1060 aaKnown RBP8.8□□□□□ -1
TBC1D1-217ENST00000511238 WIZO95785 1651 aa8.79□□□□□ -1
TBC1D1-217ENST00000511238 COL9A1P20849 921 aa8.79□□□□□ -1
TBC1D1-217ENST00000511238 PRSS12P56730 875 aa8.79□□□□□ -1
TBC1D1-217ENST00000511238 PARP9Q8IXQ6 854 aa8.79□□□□□ -1
TBC1D1-217ENST00000511238 PTPREP23469 700 aa8.78□□□□□ -1
TBC1D1-217ENST00000511238 CDCA7LQ96GN5 454 aa8.78□□□□□ -1
TBC1D1-217ENST00000511238 FAM161AQ3B820 660 aa8.77□□□□□ -1.01
TBC1D1-217ENST00000511238 PHOX2BQ99453 314 aa8.77□□□□□ -1.01
TBC1D1-217ENST00000511238 ADGRG1Q9Y653 693 aa8.77□□□□□ -1.01
TBC1D1-217ENST00000511238 PPP1R3GB7ZBB8 358 aa8.76□□□□□ -1.01
TBC1D1-217ENST00000511238 TTLL12Q14166 644 aaPredicted RBP8.76□□□□□ -1.01
TBC1D1-217ENST00000511238 IL27Q8NEV9 243 aa8.76□□□□□ -1.01
TBC1D1-217ENST00000511238 ST18O60284 1047 aa8.75□□□□□ -1.01
TBC1D1-217ENST00000511238 OATP04181 439 aa8.75□□□□□ -1.01
TBC1D1-217ENST00000511238 METTL3Q86U44 580 aaKnown RBP8.75□□□□□ -1.01
TBC1D1-217ENST00000511238 REPIN1Q9BWE0 567 aaKnown RBP8.75□□□□□ -1.01
TBC1D1-217ENST00000511238 GTF3C3Q9Y5Q9 886 aa8.75□□□□□ -1.01
TBC1D1-217ENST00000511238 PXYLP1Q8TE99 480 aa8.74□□□□□ -1.01
TBC1D1-217ENST00000511238 TMUB1Q9BVT8 246 aa8.74□□□□□ -1.01
TBC1D1-217ENST00000511238 FAM117AQ9C073 453 aa8.74□□□□□ -1.01
TBC1D1-217ENST00000511238 FAM198AQ9UFP1 575 aa8.74□□□□□ -1.01
TBC1D1-217ENST00000511238 ERBB3P21860 1342 aa8.74□□□□□ -1.01
TBC1D1-217ENST00000511238 TOP2AP11388 1531 aaKnown RBP8.74□□□□□ -1.01
TBC1D1-217ENST00000511238 GIGYF2Q6Y7W6 1299 aaKnown RBP8.73□□□□□ -1.01
TBC1D1-217ENST00000511238 TSKSQ9UJT2 592 aa8.73□□□□□ -1.01
TBC1D1-217ENST00000511238 CLCN1P35523 988 aa8.72□□□□□ -1.01
TBC1D1-217ENST00000511238 MDM2Q00987 491 aaPredicted RBP8.72□□□□□ -1.01
TBC1D1-217ENST00000511238 VARS2Q5ST30 1063 aaKnown RBP8.72□□□□□ -1.01
TBC1D1-217ENST00000511238 KCNK17Q96T54 332 aa8.72□□□□□ -1.01
TBC1D1-217ENST00000511238 GPCPD1Q9NPB8 672 aa8.71□□□□□ -1.02
TBC1D1-217ENST00000511238 NESP48681 1621 aa8.71□□□□□ -1.02
TBC1D1-217ENST00000511238 PLEKHG3A1L390 1219 aa8.7□□□□□ -1.02
TBC1D1-217ENST00000511238 TRIM6-TRIM34B2RNG4 842 aa8.7□□□□□ -1.02
TBC1D1-217ENST00000511238 MS4A1P11836 297 aa8.7□□□□□ -1.02
TBC1D1-217ENST00000511238 EMP3P54852 163 aa8.7□□□□□ -1.02
TBC1D1-217ENST00000511238 RBM46Q8TBY0 533 aaKnown RBP8.7□□□□□ -1.02
TBC1D1-217ENST00000511238 NLRP7Q8WX94 980 aa8.7□□□□□ -1.02
TBC1D1-217ENST00000511238 MARVELD3Q96A59 401 aa8.7□□□□□ -1.02
TBC1D1-217ENST00000511238 DDRGK1Q96HY6 314 aa8.7□□□□□ -1.02
TBC1D1-217ENST00000511238 ERCC6Q03468 1493 aa8.7□□□□□ -1.02
TBC1D1-217ENST00000511238 POTEEQ6S8J3 1075 aa8.69□□□□□ -1.02
TBC1D1-217ENST00000511238 KCNH8Q96L42 1107 aa8.69□□□□□ -1.02
TBC1D1-217ENST00000511238 EYA1Q99502 592 aa8.69□□□□□ -1.02
TBC1D1-217ENST00000511238 CADPSQ9ULU8 1353 aa8.69□□□□□ -1.02
TBC1D1-217ENST00000511238 LAMC3Q9Y6N6 1575 aa8.69□□□□□ -1.02
TBC1D1-217ENST00000511238 C3orf80F5H4A9 247 aa8.68□□□□□ -1.02
TBC1D1-217ENST00000511238 ARHGAP33O14559 1287 aa8.68□□□□□ -1.02
TBC1D1-217ENST00000511238 ONECUT3O60422 494 aaPredicted RBP8.68□□□□□ -1.02
TBC1D1-217ENST00000511238 PSEN2P49810 448 aa8.68□□□□□ -1.02
TBC1D1-217ENST00000511238 PROX2Q3B8N5 592 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms