RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 CCDC141Q6ZP82 1450 aa17.14■□□□□ 0.34
LIN54-210ENST00000510877 ESCO1Q5FWF5 840 aa17.14■□□□□ 0.33
LIN54-210ENST00000510877 NEFLP07196 543 aa17.13■□□□□ 0.33
LIN54-210ENST00000510877 CDCA8Q53HL2 280 aa17.13■□□□□ 0.33
LIN54-210ENST00000510877 PPM1GO15355 546 aaPredicted RBP17.12■□□□□ 0.33
LIN54-210ENST00000510877 EHBP1L1Q8N3D4 1523 aa17.12■□□□□ 0.33
LIN54-210ENST00000510877 CARD11Q9BXL7 1154 aa17.12■□□□□ 0.33
LIN54-210ENST00000510877 TRAK1Q9UPV9 953 aa17.12■□□□□ 0.33
LIN54-210ENST00000510877 CADPS2Q86UW7 1296 aa17.11■□□□□ 0.33
LIN54-210ENST00000510877 RBM33Q96EV2 1170 aaKnown RBP17.11■□□□□ 0.33
LIN54-210ENST00000510877 A2MP01023 1474 aa17.11■□□□□ 0.33
LIN54-210ENST00000510877 CERKQ8TCT0 537 aa17.11■□□□□ 0.33
LIN54-210ENST00000510877 CCDC144AA2RUR9 1427 aa17.1■□□□□ 0.33
LIN54-210ENST00000510877 NGLY1Q96IV0 654 aa17.1■□□□□ 0.33
LIN54-210ENST00000510877 FGD6Q6ZV73 1430 aa17.1■□□□□ 0.33
LIN54-210ENST00000510877 MSH6P52701 1360 aa17.09■□□□□ 0.33
LIN54-210ENST00000510877 DISP3Q9P2K9 1392 aa17.09■□□□□ 0.33
LIN54-210ENST00000510877 LRRC9Q6ZRR7 1453 aa17.09■□□□□ 0.33
LIN54-210ENST00000510877 MIA2Q96PC5 1412 aa17.08■□□□□ 0.32
LIN54-210ENST00000510877 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.07■□□□□ 0.328e-6■□□□□ 8.4
LIN54-210ENST00000510877 IDI1Q13907 227 aa17.07■□□□□ 0.32
LIN54-210ENST00000510877 ZFYVE16Q7Z3T8 1539 aa17.07■□□□□ 0.32
LIN54-210ENST00000510877 TRAPPC8Q9Y2L5 1435 aa17.07■□□□□ 0.32
LIN54-210ENST00000510877 KDM4FA0A1W2PPD8 638 aa17.07■□□□□ 0.32
LIN54-210ENST00000510877 HDGFL2Q7Z4V5 671 aaPredicted RBP17.06■□□□□ 0.32
LIN54-210ENST00000510877 ADAMTS2O95450 1211 aa17.05■□□□□ 0.32
LIN54-210ENST00000510877 YTHDC1Q96MU7 727 aaKnown RBP17.05■□□□□ 0.32
LIN54-210ENST00000510877 MAPKBP1O60336 1514 aa17.04■□□□□ 0.32
LIN54-210ENST00000510877 YEATS2Q9ULM3 1422 aa17.03■□□□□ 0.32
LIN54-210ENST00000510877 MAGI3Q5TCQ9 1506 aa17.03■□□□□ 0.32
LIN54-210ENST00000510877 MINK1Q8N4C8 1332 aaPredicted RBP17.03■□□□□ 0.32
LIN54-210ENST00000510877 ARXQ96QS3 562 aa17.02■□□□□ 0.32
LIN54-210ENST00000510877 HIRIP3Q9BW71 556 aaPredicted RBP17.02■□□□□ 0.32
LIN54-210ENST00000510877 AMOTL2Q9Y2J4 779 aa17.01■□□□□ 0.31
LIN54-210ENST00000510877 CTTNBP2Q8WZ74 1663 aa17.01■□□□□ 0.31
LIN54-210ENST00000510877 MAGI2Q86UL8 1455 aa17.01■□□□□ 0.31
LIN54-210ENST00000510877 NPHP1O15259 732 aa17■□□□□ 0.31
LIN54-210ENST00000510877 GPRASP1Q5JY77 1395 aa16.99■□□□□ 0.31
LIN54-210ENST00000510877 DHX57Q6P158 1386 aaKnown RBP16.99■□□□□ 0.31
LIN54-210ENST00000510877 KIAA1107Q9UPP5 1409 aa16.99■□□□□ 0.31
LIN54-210ENST00000510877 GPATCH8Q9UKJ3 1502 aaKnown RBP16.99■□□□□ 0.31
LIN54-210ENST00000510877 SETD5Q9C0A6 1442 aa16.98■□□□□ 0.31
LIN54-210ENST00000510877 FBXO41Q8TF61 875 aa16.97■□□□□ 0.31
LIN54-210ENST00000510877 CAMSAP2Q08AD1 1489 aa16.95■□□□□ 0.3
LIN54-210ENST00000510877 USP35Q9P2H5 1018 aa16.95■□□□□ 0.3
LIN54-210ENST00000510877 TMEM132EQ6IEE7 984 aa16.95■□□□□ 0.3
LIN54-210ENST00000510877 PCF11O94913 1555 aaKnown RBP16.94■□□□□ 0.3
LIN54-210ENST00000510877 ZCCHC11Q5TAX3 1644 aaKnown RBP16.93■□□□□ 0.3
LIN54-210ENST00000510877 MSH5O43196 834 aa16.92■□□□□ 0.3
LIN54-210ENST00000510877 ADCY10Q96PN6 1610 aa16.92■□□□□ 0.3
LIN54-210ENST00000510877 SYCP2Q9BX26 1530 aa16.92■□□□□ 0.3
LIN54-210ENST00000510877 TERF2IPQ9NYB0 399 aa16.91■□□□□ 0.3
LIN54-210ENST00000510877 ABCA8O94911 1581 aa16.91■□□□□ 0.3
LIN54-210ENST00000510877 XPCQ01831 940 aaPredicted RBP16.91■□□□□ 0.3
LIN54-210ENST00000510877 C8orf37Q96NL8 207 aa16.91■□□□□ 0.3
LIN54-210ENST00000510877 C19orf44Q9H6X5 657 aa16.91■□□□□ 0.3
LIN54-210ENST00000510877 PRDM11Q9NQV5 511 aa16.91■□□□□ 0.3
LIN54-210ENST00000510877 STRN4Q9NRL3 753 aa16.91■□□□□ 0.3
LIN54-210ENST00000510877 ZNF335Q9H4Z2 1342 aaPredicted RBP16.91■□□□□ 0.3
LIN54-210ENST00000510877 SUPT6HQ7KZ85 1726 aaKnown RBP16.9■□□□□ 0.3
LIN54-210ENST00000510877 CFAP74Q9C0B2 1584 aa16.9■□□□□ 0.3
LIN54-210ENST00000510877 PMFBP1Q8TBY8 1022 aa16.89■□□□□ 0.3
LIN54-210ENST00000510877 TMF1P82094 1093 aa16.89■□□□□ 0.29
LIN54-210ENST00000510877 KLHL34Q8N239 644 aa16.89■□□□□ 0.29
LIN54-210ENST00000510877 RPGRIP1LQ68CZ1 1315 aa16.88■□□□□ 0.29
LIN54-210ENST00000510877 DAPK1P53355 1430 aa16.88■□□□□ 0.29
LIN54-210ENST00000510877 AMPHP49418 695 aa16.88■□□□□ 0.29
LIN54-210ENST00000510877 LTV1Q96GA3 475 aaPredicted RBP16.88■□□□□ 0.29
LIN54-210ENST00000510877 FOXO3O43524 673 aa16.88■□□□□ 0.29
LIN54-210ENST00000510877 EIF4G2P78344 907 aaKnown RBP eCLIP16.88■□□□□ 0.29
LIN54-210ENST00000510877 SIN3AQ96ST3 1273 aa16.88■□□□□ 0.29
LIN54-210ENST00000510877 EIF3AQ14152 1382 aaKnown RBP16.87■□□□□ 0.29
LIN54-210ENST00000510877 PDE3BQ13370 1112 aa16.87■□□□□ 0.29
LIN54-210ENST00000510877 STAC3Q96MF2 364 aa16.87■□□□□ 0.29
LIN54-210ENST00000510877 KCNA6P17658 529 aa16.87■□□□□ 0.29
LIN54-210ENST00000510877 LRRC59Q96AG4 307 aaKnown RBP16.86■□□□□ 0.29
LIN54-210ENST00000510877 KNSTRNQ9Y448 316 aa16.86■□□□□ 0.29
LIN54-210ENST00000510877 NUTM2GQ5VZR2 741 aa16.85■□□□□ 0.29
LIN54-210ENST00000510877 TNNT2P45379 298 aaPredicted RBP16.85■□□□□ 0.29
LIN54-210ENST00000510877 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.85■□□□□ 0.295e-6■■■□□ 15.5
LIN54-210ENST00000510877 ILDR1Q86SU0 546 aaPredicted RBP16.84■□□□□ 0.29
LIN54-210ENST00000510877 DIP2BQ9P265 1576 aa16.83■□□□□ 0.29
LIN54-210ENST00000510877 RTEL1-TNFRSF6BF6WH68 1400 aa16.83■□□□□ 0.28
LIN54-210ENST00000510877 PRAM1Q96QH2 718 aa16.83■□□□□ 0.28
LIN54-210ENST00000510877 EVC2Q86UK5 1308 aa16.83■□□□□ 0.28
LIN54-210ENST00000510877 ROCK2O75116 1388 aaKnown RBP16.83■□□□□ 0.28
LIN54-210ENST00000510877 LRPPRCP42704 1394 aaKnown RBP16.83■□□□□ 0.28
LIN54-210ENST00000510877 ABTB2Q8N961 1025 aa16.83■□□□□ 0.28
LIN54-210ENST00000510877 NLRP6P59044 892 aa16.82■□□□□ 0.28
LIN54-210ENST00000510877 SLAIN2Q9P270 581 aa16.82■□□□□ 0.28
LIN54-210ENST00000510877 PTPRMP28827 1452 aa16.82■□□□□ 0.28
LIN54-210ENST00000510877 CFAP70Q5T0N1 1121 aa16.82■□□□□ 0.28
LIN54-210ENST00000510877 SYTL4Q96C24 671 aaPredicted RBP16.82■□□□□ 0.28
LIN54-210ENST00000510877 RAB3GAP2Q9H2M9 1393 aa16.81■□□□□ 0.28
LIN54-210ENST00000510877 CFAP53Q96M91 514 aa16.81■□□□□ 0.28
LIN54-210ENST00000510877 TIAM1Q13009 1591 aa16.81■□□□□ 0.28
LIN54-210ENST00000510877 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.81■□□□□ 0.28
LIN54-210ENST00000510877 TBX22Q9Y458 520 aa16.79■□□□□ 0.28
LIN54-210ENST00000510877 ERBINQ96RT1 1412 aa16.79■□□□□ 0.28
LIN54-210ENST00000510877 RRBP1Q9P2E9 1410 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms