RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.43□□□□□ -0.26
PDLIM5-213ENST00000509357 ADGRL2O95490 1459 aa13.42□□□□□ -0.26
PDLIM5-213ENST00000509357 NPATQ14207 1427 aa13.42□□□□□ -0.26
PDLIM5-213ENST00000509357 DMRT2Q9Y5R5 561 aa13.42□□□□□ -0.26
PDLIM5-213ENST00000509357 PREX1Q8TCU6 1659 aa13.42□□□□□ -0.26
PDLIM5-213ENST00000509357 MROH1Q8NDA8 1641 aa13.42□□□□□ -0.26
PDLIM5-213ENST00000509357 CLTCQ00610 1675 aaKnown RBP13.41□□□□□ -0.26
PDLIM5-213ENST00000509357 ILDR1Q86SU0 546 aaPredicted RBP13.41□□□□□ -0.26
PDLIM5-213ENST00000509357 SETD1BQ9UPS6 1966 aaKnown RBP13.4□□□□□ -0.26
PDLIM5-213ENST00000509357 NCOA1Q15788 1441 aa13.39□□□□□ -0.27
PDLIM5-213ENST00000509357 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.39□□□□□ -0.272e-6■■□□□ 11.5
PDLIM5-213ENST00000509357 KIF15Q9NS87 1388 aa13.39□□□□□ -0.27
PDLIM5-213ENST00000509357 MROH2AA6NES4 1674 aa13.39□□□□□ -0.27
PDLIM5-213ENST00000509357 FBXO31Q5XUX0 539 aaPredicted RBP13.38□□□□□ -0.27
PDLIM5-213ENST00000509357 ANKRD30AQ9BXX3 1397 aa13.37□□□□□ -0.27
PDLIM5-213ENST00000509357 RNF17Q9BXT8 1623 aaKnown RBP13.37□□□□□ -0.27
PDLIM5-213ENST00000509357 EIF2AK4Q9P2K8 1649 aaKnown RBP13.36□□□□□ -0.27
PDLIM5-213ENST00000509357 KDM5DQ9BY66 1539 aa13.36□□□□□ -0.27
PDLIM5-213ENST00000509357 DUOX2Q9NRD8 1548 aa13.36□□□□□ -0.27
PDLIM5-213ENST00000509357 DEPDC5O75140 1603 aa13.35□□□□□ -0.27
PDLIM5-213ENST00000509357 TNRQ92752 1358 aa13.35□□□□□ -0.27
PDLIM5-213ENST00000509357 GCC2Q8IWJ2 1684 aa13.35□□□□□ -0.27
PDLIM5-213ENST00000509357 ITGAEP38570 1179 aa13.34□□□□□ -0.27
PDLIM5-213ENST00000509357 NCKAP5LQ9HCH0 1330 aa13.34□□□□□ -0.27
PDLIM5-213ENST00000509357 FAM135AQ9P2D6 1515 aa13.33□□□□□ -0.28
PDLIM5-213ENST00000509357 CEP152O94986 1710 aa13.33□□□□□ -0.28
PDLIM5-213ENST00000509357 KANK1Q14678 1352 aa13.32□□□□□ -0.28
PDLIM5-213ENST00000509357 ERBINQ96RT1 1412 aa13.32□□□□□ -0.28
PDLIM5-213ENST00000509357 PZPP20742 1482 aa13.32□□□□□ -0.28
PDLIM5-213ENST00000509357 FBXO41Q8TF61 875 aa13.32□□□□□ -0.28
PDLIM5-213ENST00000509357 ROCK1Q13464 1354 aa13.32□□□□□ -0.28
PDLIM5-213ENST00000509357 CERKQ8TCT0 537 aa13.31□□□□□ -0.28
PDLIM5-213ENST00000509357 CAMSAP1Q5T5Y3 1602 aa13.31□□□□□ -0.28
PDLIM5-213ENST00000509357 NAIPQ13075 1403 aa13.3□□□□□ -0.28
PDLIM5-213ENST00000509357 PRDM15P57071 1507 aaPredicted RBP13.3□□□□□ -0.28
PDLIM5-213ENST00000509357 VWDEQ8N2E2 1590 aa13.3□□□□□ -0.28
PDLIM5-213ENST00000509357 PKD2Q13563 968 aa13.3□□□□□ -0.28
PDLIM5-213ENST00000509357 ABCC3O15438 1527 aa13.29□□□□□ -0.28
PDLIM5-213ENST00000509357 UNC13BO14795 1591 aa13.29□□□□□ -0.28
PDLIM5-213ENST00000509357 MYO3AQ8NEV4 1616 aa13.29□□□□□ -0.28
PDLIM5-213ENST00000509357 THEMISQ8N1K5 641 aaPredicted RBP13.29□□□□□ -0.28
PDLIM5-213ENST00000509357 PTPRTO14522 1441 aa13.29□□□□□ -0.28
PDLIM5-213ENST00000509357 A2ML1A8K2U0 1454 aa13.29□□□□□ -0.28
PDLIM5-213ENST00000509357 CEP170BQ9Y4F5 1589 aaPredicted RBP13.28□□□□□ -0.28
PDLIM5-213ENST00000509357 ANKRD50Q9ULJ7 1429 aa13.28□□□□□ -0.28
PDLIM5-213ENST00000509357 STRCQ7RTU9 1775 aa13.27□□□□□ -0.29
PDLIM5-213ENST00000509357 HFM1A2PYH4 1435 aa13.26□□□□□ -0.29
PDLIM5-213ENST00000509357 ANKLE2Q86XL3 938 aa13.26□□□□□ -0.29
PDLIM5-213ENST00000509357 PLA2R1Q13018 1463 aa13.25□□□□□ -0.29
PDLIM5-213ENST00000509357 NLRP1Q9C000 1473 aa13.25□□□□□ -0.29
PDLIM5-213ENST00000509357 STAG3Q9UJ98 1225 aa13.25□□□□□ -0.29
PDLIM5-213ENST00000509357 ZC3H13Q5T200 1668 aaKnown RBP13.24□□□□□ -0.29
PDLIM5-213ENST00000509357 ERVK-7P63135 1459 aa13.23□□□□□ -0.29
PDLIM5-213ENST00000509357 ZNF142P52746 1687 aaPredicted RBP13.23□□□□□ -0.29
PDLIM5-213ENST00000509357 IQGAP3Q86VI3 1631 aa13.23□□□□□ -0.29
PDLIM5-213ENST00000509357 UGGT1Q9NYU2 1555 aa13.23□□□□□ -0.29
PDLIM5-213ENST00000509357 ARHGAP31Q2M1Z3 1444 aa13.22□□□□□ -0.29
PDLIM5-213ENST00000509357 CFAP65Q6ZU64 1925 aaKnown RBP13.21□□□□□ -0.29
PDLIM5-213ENST00000509357 ZNF335Q9H4Z2 1342 aaPredicted RBP13.21□□□□□ -0.29
PDLIM5-213ENST00000509357 LMTK2Q8IWU2 1503 aa13.21□□□□□ -0.29
PDLIM5-213ENST00000509357 E9PCH4 1651 aa13.21□□□□□ -0.3
PDLIM5-213ENST00000509357 SPATA31D1Q6ZQQ2 1576 aa13.2□□□□□ -0.3
PDLIM5-213ENST00000509357 EFCAB6Q5THR3 1501 aa13.19□□□□□ -0.3
PDLIM5-213ENST00000509357 TET3O43151 1660 aa13.18□□□□□ -0.3
PDLIM5-213ENST00000509357 EID1Q9Y6B2 187 aa13.18□□□□□ -0.3
PDLIM5-213ENST00000509357 TXNDC2Q86VQ3 553 aa13.17□□□□□ -0.3
PDLIM5-213ENST00000509357 SYNMO15061 1565 aa13.16□□□□□ -0.3
PDLIM5-213ENST00000509357 NPHP4O75161 1426 aaPredicted RBP13.16□□□□□ -0.3
PDLIM5-213ENST00000509357 IDI1Q13907 227 aa13.16□□□□□ -0.3
PDLIM5-213ENST00000509357 NUP155O75694 1391 aa13.16□□□□□ -0.3
PDLIM5-213ENST00000509357 SLC52A1Q9NWF4 448 aa13.15□□□□□ -0.3
PDLIM5-213ENST00000509357 RAB3GAP2Q9H2M9 1393 aa13.15□□□□□ -0.3
PDLIM5-213ENST00000509357 SETD5Q9C0A6 1442 aa13.14□□□□□ -0.31
PDLIM5-213ENST00000509357 CHGAP10645 457 aaKnown RBP13.14□□□□□ -0.31
PDLIM5-213ENST00000509357 BCANQ96GW7 911 aa13.14□□□□□ -0.31
PDLIM5-213ENST00000509357 LTBP4Q8N2S1 1624 aa13.13□□□□□ -0.31
PDLIM5-213ENST00000509357 UBAP1LF5GYI3 381 aa13.12□□□□□ -0.31
PDLIM5-213ENST00000509357 LTKP29376 864 aa13.12□□□□□ -0.31
PDLIM5-213ENST00000509357 TRIM52Q96A61 297 aa13.11□□□□□ -0.31
PDLIM5-213ENST00000509357 NOS1P29475 1434 aa13.11□□□□□ -0.31
PDLIM5-213ENST00000509357 NEURL4Q96JN8 1562 aa13.11□□□□□ -0.31
PDLIM5-213ENST00000509357 POLR1AO95602 1720 aaPredicted RBP13.1□□□□□ -0.31
PDLIM5-213ENST00000509357 RPRD2Q5VT52 1461 aaKnown RBP13.1□□□□□ -0.31
PDLIM5-213ENST00000509357 SCAF11Q99590 1463 aaKnown RBP13.1□□□□□ -0.31
PDLIM5-213ENST00000509357 TMEM2Q9UHN6 1383 aa13.1□□□□□ -0.31
PDLIM5-213ENST00000509357 HDGFP51858 240 aaKnown RBP13.1□□□□□ -0.31
PDLIM5-213ENST00000509357 MYO5BQ9ULV0 1848 aa13.1□□□□□ -0.31
PDLIM5-213ENST00000509357 SPHKAPQ2M3C7 1700 aa13.1□□□□□ -0.31
PDLIM5-213ENST00000509357 MED14O60244 1454 aa13.1□□□□□ -0.31
PDLIM5-213ENST00000509357 PIK3C2BO00750 1634 aa13.1□□□□□ -0.31
PDLIM5-213ENST00000509357 PPP1R15AO75807 674 aaPredicted RBP13.09□□□□□ -0.31
PDLIM5-213ENST00000509357 SENP3Q9H4L4 574 aaPredicted RBP13.09□□□□□ -0.31
PDLIM5-213ENST00000509357 SCAF1Q9H7N4 1312 aaKnown RBP13.09□□□□□ -0.31
PDLIM5-213ENST00000509357 UBR1Q8IWV7 1749 aa13.08□□□□□ -0.32
PDLIM5-213ENST00000509357 IQSEC2Q5JU85 1478 aa13.08□□□□□ -0.32
PDLIM5-213ENST00000509357 TRIM26Q12899 539 aaPredicted RBP13.07□□□□□ -0.32
PDLIM5-213ENST00000509357 SLIT1O75093 1534 aa13.07□□□□□ -0.32
PDLIM5-213ENST00000509357 IQGAP1P46940 1657 aa13.06□□□□□ -0.32
PDLIM5-213ENST00000509357 ARHGAP23Q9P227 1491 aa13.06□□□□□ -0.32
PDLIM5-213ENST00000509357 TOM1O60784 492 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms