RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 TTC37Q6PGP7 1564 aa14.94□□□□□ -0.02
SEC31A-228ENST00000509142 SHROOM2Q13796 1616 aa14.94□□□□□ -0.02
SEC31A-228ENST00000509142 KDM5DQ9BY66 1539 aa14.94□□□□□ -0.02
SEC31A-228ENST00000509142 FAM135AQ9P2D6 1515 aa14.93□□□□□ -0.02
SEC31A-228ENST00000509142 UHRF1BP1Q6BDS2 1440 aa14.93□□□□□ -0.02
SEC31A-228ENST00000509142 RALGAPBQ86X10 1494 aa14.92□□□□□ -0.02
SEC31A-228ENST00000509142 ZBED9Q6R2W3 1325 aa14.92□□□□□ -0.02
SEC31A-228ENST00000509142 ARHGEF12Q9NZN5 1544 aa14.91□□□□□ -0.02
SEC31A-228ENST00000509142 PLCH2O75038 1416 aa14.9□□□□□ -0.02
SEC31A-228ENST00000509142 TMC1Q8TDI8 760 aa14.89□□□□□ -0.03
SEC31A-228ENST00000509142 SPAG9O60271 1321 aaKnown RBP14.89□□□□□ -0.03
SEC31A-228ENST00000509142 KDM5CP41229 1560 aa14.89□□□□□ -0.03
SEC31A-228ENST00000509142 MYO5CQ9NQX4 1742 aa14.88□□□□□ -0.03
SEC31A-228ENST00000509142 SENP3-EIF4A1A0A087X0R7 540 aa14.88□□□□□ -0.03
SEC31A-228ENST00000509142 AFAP1Q8N556 730 aa14.87□□□□□ -0.03
SEC31A-228ENST00000509142 B4GALNT3Q6L9W6 998 aa14.87□□□□□ -0.03
SEC31A-228ENST00000509142 NBPF1Q3BBV0 1214 aa14.86□□□□□ -0.03
SEC31A-228ENST00000509142 PPP4R2Q9NY27 417 aa14.86□□□□□ -0.03
SEC31A-228ENST00000509142 MAST1Q9Y2H9 1570 aa14.85□□□□□ -0.03
SEC31A-228ENST00000509142 DUOX2Q9NRD8 1548 aa14.85□□□□□ -0.03
SEC31A-228ENST00000509142 ZCCHC11Q5TAX3 1644 aaKnown RBP14.84□□□□□ -0.03
SEC31A-228ENST00000509142 UHRF1BP1LA0JNW5 1464 aa14.84□□□□□ -0.03
SEC31A-228ENST00000509142 TRAPPC8Q9Y2L5 1435 aa14.83□□□□□ -0.03
SEC31A-228ENST00000509142 ERICH6BQ5W0A0 696 aa14.82□□□□□ -0.04
SEC31A-228ENST00000509142 CLASP1Q7Z460 1538 aa14.82□□□□□ -0.04
SEC31A-228ENST00000509142 PRAG1Q86YV5 1406 aa14.82□□□□□ -0.04
SEC31A-228ENST00000509142 ERBINQ96RT1 1412 aa14.82□□□□□ -0.04
SEC31A-228ENST00000509142 FANCIQ9NVI1 1328 aa14.81□□□□□ -0.04
SEC31A-228ENST00000509142 PLA2R1Q13018 1463 aa14.81□□□□□ -0.04
SEC31A-228ENST00000509142 PLXNC1O60486 1568 aa14.8□□□□□ -0.04
SEC31A-228ENST00000509142 RALBP1Q15311 655 aa14.8□□□□□ -0.04
SEC31A-228ENST00000509142 NPM1P06748 294 aaKnown RBP eCLIP14.8□□□□□ -0.04
SEC31A-228ENST00000509142 UNC13BO14795 1591 aa14.8□□□□□ -0.04
SEC31A-228ENST00000509142 SMG6Q86US8 1419 aaKnown RBP14.78□□□□□ -0.04
SEC31A-228ENST00000509142 PNISRQ8TF01 805 aaKnown RBP14.78□□□□□ -0.04
SEC31A-228ENST00000509142 A2MP01023 1474 aa14.78□□□□□ -0.04
SEC31A-228ENST00000509142 KIF3BO15066 747 aa14.78□□□□□ -0.04
SEC31A-228ENST00000509142 MYBBP1AQ9BQG0 1328 aaKnown RBP14.77□□□□□ -0.04
SEC31A-228ENST00000509142 TMF1P82094 1093 aa14.77□□□□□ -0.04
SEC31A-228ENST00000509142 ABCC1P33527 1531 aa14.77□□□□□ -0.05
SEC31A-228ENST00000509142 KANK1Q14678 1352 aa14.77□□□□□ -0.05
SEC31A-228ENST00000509142 RNF123Q5XPI4 1314 aa14.76□□□□□ -0.05
SEC31A-228ENST00000509142 IQGAP3Q86VI3 1631 aa14.76□□□□□ -0.05
SEC31A-228ENST00000509142 KTN1Q86UP2 1357 aaKnown RBP14.75□□□□□ -0.05
SEC31A-228ENST00000509142 WDR7Q9Y4E6 1490 aa14.75□□□□□ -0.05
SEC31A-228ENST00000509142 FANCAO15360 1455 aa14.74□□□□□ -0.05
SEC31A-228ENST00000509142 RTEL1-TNFRSF6BF6WH68 1400 aa14.73□□□□□ -0.05
SEC31A-228ENST00000509142 CC2D1BQ5T0F9 858 aaKnown RBP14.73□□□□□ -0.05
SEC31A-228ENST00000509142 NUDCQ9Y266 331 aa14.73□□□□□ -0.05
SEC31A-228ENST00000509142 SCAPERQ9BY12 1400 aa14.73□□□□□ -0.05
SEC31A-228ENST00000509142 GPRASP1Q5JY77 1395 aa14.73□□□□□ -0.05
SEC31A-228ENST00000509142 E9PCH4 1651 aa14.72□□□□□ -0.05
SEC31A-228ENST00000509142 BRD4O60885 1362 aaPredicted RBP14.72□□□□□ -0.05
SEC31A-228ENST00000509142 NLRP13Q86W25 1043 aa14.72□□□□□ -0.05
SEC31A-228ENST00000509142 PANK3Q9H999 370 aa14.71□□□□□ -0.05
SEC31A-228ENST00000509142 SALL2Q9Y467 1007 aaPredicted RBP14.71□□□□□ -0.05
SEC31A-228ENST00000509142 ATP10AO60312 1499 aa14.71□□□□□ -0.05
SEC31A-228ENST00000509142 TRPM1Q7Z4N2 1603 aa14.71□□□□□ -0.05
SEC31A-228ENST00000509142 LRPPRCP42704 1394 aaKnown RBP14.71□□□□□ -0.05
SEC31A-228ENST00000509142 TESK2Q96S53 571 aa14.7□□□□□ -0.06
SEC31A-228ENST00000509142 MAGI2Q86UL8 1455 aa14.7□□□□□ -0.06
SEC31A-228ENST00000509142 OSCARQ8IYS5 282 aa14.7□□□□□ -0.06
SEC31A-228ENST00000509142 ADGRL1O94910 1474 aa14.7□□□□□ -0.06
SEC31A-228ENST00000509142 DISP3Q9P2K9 1392 aa14.69□□□□□ -0.06
SEC31A-228ENST00000509142 ARAP3Q8WWN8 1544 aa14.68□□□□□ -0.06
SEC31A-228ENST00000509142 ASXL2Q76L83 1435 aa14.68□□□□□ -0.06
SEC31A-228ENST00000509142 EIF2AK4Q9P2K8 1649 aaKnown RBP14.68□□□□□ -0.06
SEC31A-228ENST00000509142 STAC3Q96MF2 364 aa14.68□□□□□ -0.06
SEC31A-228ENST00000509142 CDCA8Q53HL2 280 aa14.67□□□□□ -0.06
SEC31A-228ENST00000509142 ZFYVE16Q7Z3T8 1539 aa14.67□□□□□ -0.06
SEC31A-228ENST00000509142 CHGAP10645 457 aaKnown RBP14.67□□□□□ -0.06
SEC31A-228ENST00000509142 PER1O15534 1290 aaPredicted RBP14.66□□□□□ -0.06
SEC31A-228ENST00000509142 KNSTRNQ9Y448 316 aa14.66□□□□□ -0.06
SEC31A-228ENST00000509142 ATP7AQ04656 1500 aa14.66□□□□□ -0.06
SEC31A-228ENST00000509142 WASHC2CQ9Y4E1 1318 aa14.66□□□□□ -0.06
SEC31A-228ENST00000509142 COL17A1Q9UMD9 1497 aaPredicted RBP14.66□□□□□ -0.06
SEC31A-228ENST00000509142 PRDM15P57071 1507 aaPredicted RBP14.64□□□□□ -0.07
SEC31A-228ENST00000509142 PARD3Q8TEW0 1356 aa14.64□□□□□ -0.07
SEC31A-228ENST00000509142 GGT6Q6P531 493 aa14.62□□□□□ -0.07
SEC31A-228ENST00000509142 PAK3O75914 559 aaPredicted RBP14.61□□□□□ -0.07
SEC31A-228ENST00000509142 BCL11AQ9H165 835 aa14.61□□□□□ -0.07
SEC31A-228ENST00000509142 PTPRTO14522 1441 aa14.61□□□□□ -0.07
SEC31A-228ENST00000509142 TRPM2O94759 1503 aa14.61□□□□□ -0.07
SEC31A-228ENST00000509142 CCDC136Q96JN2 1154 aa14.61□□□□□ -0.07
SEC31A-228ENST00000509142 ABCA9Q8IUA7 1624 aa14.6□□□□□ -0.07
SEC31A-228ENST00000509142 LAMC1P11047 1609 aa14.6□□□□□ -0.07
SEC31A-228ENST00000509142 EIF3AQ14152 1382 aaKnown RBP14.6□□□□□ -0.07
SEC31A-228ENST00000509142 CFAP70Q5T0N1 1121 aa14.59□□□□□ -0.07
SEC31A-228ENST00000509142 SCAF11Q99590 1463 aaKnown RBP14.58□□□□□ -0.08
SEC31A-228ENST00000509142 CD109Q6YHK3 1445 aa14.58□□□□□ -0.08
SEC31A-228ENST00000509142 WDR43Q15061 677 aaKnown RBP eCLIP14.57□□□□□ -0.086e-7■□□□□ 9.8
SEC31A-228ENST00000509142 TET3O43151 1660 aa14.57□□□□□ -0.08
SEC31A-228ENST00000509142 PDE3BQ13370 1112 aa14.57□□□□□ -0.08
SEC31A-228ENST00000509142 CDCA7LQ96GN5 454 aa14.57□□□□□ -0.08
SEC31A-228ENST00000509142 SPHKAPQ2M3C7 1700 aa14.57□□□□□ -0.08
SEC31A-228ENST00000509142 INO80Q9ULG1 1556 aaPredicted RBP14.56□□□□□ -0.08
SEC31A-228ENST00000509142 SLC24A1O60721 1099 aa14.56□□□□□ -0.08
SEC31A-228ENST00000509142 ZNF518AQ6AHZ1 1483 aa14.56□□□□□ -0.08
SEC31A-228ENST00000509142 CLTCL1P53675 1640 aa14.56□□□□□ -0.08
SEC31A-228ENST00000509142 EXOC6Q8TAG9 804 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms